RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 NISCHQ9Y2I1 1504 aa18.65■□□□□ 0.58
SHQ1-203ENST00000463369 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
SHQ1-203ENST00000463369 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
SHQ1-203ENST00000463369 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
SHQ1-203ENST00000463369 CCDC180Q9P1Z9 1646 aa16.45■□□□□ 0.22
SHQ1-203ENST00000463369 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
SHQ1-203ENST00000463369 ABCC9O60706 1549 aa15.63■□□□□ 0.09
SHQ1-203ENST00000463369 ZCCHC6Q5VYS8 1495 aaKnown RBP15.61■□□□□ 0.09
SHQ1-203ENST00000463369 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
SHQ1-203ENST00000463369 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
SHQ1-203ENST00000463369 DCAF8L2P0C7V8 631 aa15.37■□□□□ 0.05
SHQ1-203ENST00000463369 MYO15BQ96JP2 1530 aa15.37■□□□□ 0.05
SHQ1-203ENST00000463369 NACADO15069 1562 aa15.33■□□□□ 0.04
SHQ1-203ENST00000463369 RTN4Q9NQC3 1192 aaKnown RBP15.26■□□□□ 0.03
SHQ1-203ENST00000463369 RB1CC1Q8TDY2 1594 aa15.25■□□□□ 0.03
SHQ1-203ENST00000463369 PHF23Q9BUL5 403 aaPredicted RBP15.21■□□□□ 0.03
SHQ1-203ENST00000463369 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
SHQ1-203ENST00000463369 SCRIBQ14160 1630 aa15.01□□□□□ -0.01
SHQ1-203ENST00000463369 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
SHQ1-203ENST00000463369 DAXXQ9UER7 740 aaPredicted RBP14.94□□□□□ -0.02
SHQ1-203ENST00000463369 NCBP3Q53F19 620 aaKnown RBP14.91□□□□□ -0.02
SHQ1-203ENST00000463369 AMER1Q5JTC6 1135 aaPredicted RBP14.91□□□□□ -0.02
SHQ1-203ENST00000463369 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
SHQ1-203ENST00000463369 KCNA4P22459 653 aa14.88□□□□□ -0.03
SHQ1-203ENST00000463369 BICRAQ9NZM4 1560 aa14.79□□□□□ -0.04
SHQ1-203ENST00000463369 PABPN1Q86U42 306 aaKnown RBP eCLIP14.66□□□□□ -0.06
SHQ1-203ENST00000463369 PRKCSHP14314 528 aaPredicted RBP14.54□□□□□ -0.08
SHQ1-203ENST00000463369 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
SHQ1-203ENST00000463369 HRCP23327 699 aa14.51□□□□□ -0.09
SHQ1-203ENST00000463369 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
SHQ1-203ENST00000463369 BAZ1AQ9NRL2 1556 aaPredicted RBP14.43□□□□□ -0.1
SHQ1-203ENST00000463369 SMARCA4P51532 1647 aa14.41□□□□□ -0.1
SHQ1-203ENST00000463369 MROH2BQ7Z745 1585 aa14.38□□□□□ -0.11
SHQ1-203ENST00000463369 EIF4G1Q04637 1599 aaKnown RBP14.35□□□□□ -0.11
SHQ1-203ENST00000463369 RSF1Q96T23 1441 aaPredicted RBP14.34□□□□□ -0.11
SHQ1-203ENST00000463369 WIZO95785 1651 aa14.29□□□□□ -0.12
SHQ1-203ENST00000463369 PELP1Q8IZL8 1130 aaKnown RBP14.29□□□□□ -0.12
SHQ1-203ENST00000463369 SUPT5HO00267 1087 aaKnown RBP14.27□□□□□ -0.13
SHQ1-203ENST00000463369 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
SHQ1-203ENST00000463369 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.13
SHQ1-203ENST00000463369 SMARCA2P51531 1590 aa14.21□□□□□ -0.14
SHQ1-203ENST00000463369 ARXQ96QS3 562 aa14.2□□□□□ -0.14
SHQ1-203ENST00000463369 SLC4A1APQ9BWU0 796 aaKnown RBP14.18□□□□□ -0.14
SHQ1-203ENST00000463369 TIMELESSQ9UNS1 1208 aa14.18□□□□□ -0.14
SHQ1-203ENST00000463369 ATAD2BQ9ULI0 1458 aa14.18□□□□□ -0.14
SHQ1-203ENST00000463369 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
SHQ1-203ENST00000463369 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
SHQ1-203ENST00000463369 PPARGC1BQ86YN6 1023 aaKnown RBP14.11□□□□□ -0.15
SHQ1-203ENST00000463369 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
SHQ1-203ENST00000463369 BAZ1BQ9UIG0 1483 aaKnown RBP14.09□□□□□ -0.15
SHQ1-203ENST00000463369 TAOK2Q9UL54 1235 aa14.08□□□□□ -0.16
SHQ1-203ENST00000463369 PCGF6Q9BYE7 350 aa14.07□□□□□ -0.16
SHQ1-203ENST00000463369 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
SHQ1-203ENST00000463369 TULP1O00294 542 aaPredicted RBP13.96□□□□□ -0.17
SHQ1-203ENST00000463369 CCDC88BA6NC98 1476 aa13.94□□□□□ -0.18
SHQ1-203ENST00000463369 BCANQ96GW7 911 aa13.91□□□□□ -0.18
SHQ1-203ENST00000463369 APLP2Q06481 763 aa13.89□□□□□ -0.19
SHQ1-203ENST00000463369 TPRNQ4KMQ1 711 aa13.85□□□□□ -0.19
SHQ1-203ENST00000463369 PRDM2Q13029 1718 aa13.81□□□□□ -0.2
SHQ1-203ENST00000463369 MYT1Q01538 1121 aa13.8□□□□□ -0.2
SHQ1-203ENST00000463369 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
SHQ1-203ENST00000463369 HOMEZQ8IX15 550 aa13.77□□□□□ -0.21
SHQ1-203ENST00000463369 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
SHQ1-203ENST00000463369 PLCB2Q00722 1185 aa13.75□□□□□ -0.21
SHQ1-203ENST00000463369 CFTRP13569 1480 aa13.74□□□□□ -0.21
SHQ1-203ENST00000463369 ADRA2BP18089 450 aa13.73□□□□□ -0.21
SHQ1-203ENST00000463369 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
SHQ1-203ENST00000463369 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.21
SHQ1-203ENST00000463369 RANGAP1P46060 587 aaPredicted RBP13.7□□□□□ -0.22
SHQ1-203ENST00000463369 ZBTB22O15209 634 aa13.69□□□□□ -0.22
SHQ1-203ENST00000463369 NESP48681 1621 aa13.66□□□□□ -0.22
SHQ1-203ENST00000463369 TRIM26Q12899 539 aaPredicted RBP13.65□□□□□ -0.22
SHQ1-203ENST00000463369 ZEB1P37275 1124 aaPredicted RBP13.63□□□□□ -0.23
SHQ1-203ENST00000463369 HAP1P54257 671 aaPredicted RBP13.62□□□□□ -0.23
SHQ1-203ENST00000463369 ERICH6Q7L0X2 663 aa13.61□□□□□ -0.23
SHQ1-203ENST00000463369 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
SHQ1-203ENST00000463369 ABCC8Q09428 1581 aa13.58□□□□□ -0.24
SHQ1-203ENST00000463369 FANCD2Q9BXW9 1451 aa13.57□□□□□ -0.24
SHQ1-203ENST00000463369 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
SHQ1-203ENST00000463369 GTF3C3Q9Y5Q9 886 aa13.56□□□□□ -0.24
SHQ1-203ENST00000463369 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
SHQ1-203ENST00000463369 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
SHQ1-203ENST00000463369 FOXD1Q16676 465 aa13.51□□□□□ -0.25
SHQ1-203ENST00000463369 LOC105371045A0A1W2PR82 267 aa13.5□□□□□ -0.25
SHQ1-203ENST00000463369 BIVM-ERCC5R4GMW8 1640 aa13.5□□□□□ -0.25
SHQ1-203ENST00000463369 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
SHQ1-203ENST00000463369 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
SHQ1-203ENST00000463369 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
SHQ1-203ENST00000463369 TOP2BQ02880 1626 aa13.48□□□□□ -0.25
SHQ1-203ENST00000463369 CUX1P39880 1505 aa13.46□□□□□ -0.25
SHQ1-203ENST00000463369 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
SHQ1-203ENST00000463369 DNMBPQ6XZF7 1577 aa13.44□□□□□ -0.26
SHQ1-203ENST00000463369 ACIN1Q9UKV3 1341 aaKnown RBP13.43□□□□□ -0.26
SHQ1-203ENST00000463369 ERCC6Q03468 1493 aa13.43□□□□□ -0.26
SHQ1-203ENST00000463369 URB2Q14146 1524 aaKnown RBP13.42□□□□□ -0.26
SHQ1-203ENST00000463369 TOPBP1Q92547 1522 aa13.41□□□□□ -0.26
SHQ1-203ENST00000463369 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
SHQ1-203ENST00000463369 THOC2Q8NI27 1593 aaKnown RBP13.4□□□□□ -0.27
SHQ1-203ENST00000463369 WDR62O43379 1518 aa13.37□□□□□ -0.27
SHQ1-203ENST00000463369 NEUROD1Q13562 356 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms