RNA–Protein interactions for RNA: ENST00000618977.4

PKIB-212, Transcript of cAMP-dependent protein kinase inhibitor beta, humanhuman

TSL 3

Gene PKIB, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKIB-212ENST00000618977 AEBP2Q6ZN18 517 aaPredicted RBP28.8■■■□□ 2.2
PKIB-212ENST00000618977 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
PKIB-212ENST00000618977 SENP3Q9H4L4 574 aaPredicted RBP24.6■■□□□ 1.53
PKIB-212ENST00000618977 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
PKIB-212ENST00000618977 FOXD1Q16676 465 aa22.85■■□□□ 1.25
PKIB-212ENST00000618977 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
PKIB-212ENST00000618977 PLPPR3Q6T4P5 718 aa22.32■■□□□ 1.16
PKIB-212ENST00000618977 ADRA2BP18089 450 aa21.6■■□□□ 1.05
PKIB-212ENST00000618977 PPP6R1Q9UPN7 881 aa21.59■■□□□ 1.05
PKIB-212ENST00000618977 PIAS4Q8N2W9 510 aaPredicted RBP21.5■■□□□ 1.03
PKIB-212ENST00000618977 MSH5O43196 834 aa21.31■■□□□ 1
PKIB-212ENST00000618977 ABCC9O60706 1549 aa21.13■□□□□ 0.97
PKIB-212ENST00000618977 DNAJC5BQ9UF47 199 aa20.6■□□□□ 0.89
PKIB-212ENST00000618977 CCDC180Q9P1Z9 1646 aa20.34■□□□□ 0.85
PKIB-212ENST00000618977 POTEDQ86YR6 584 aa20.23■□□□□ 0.83
PKIB-212ENST00000618977 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
PKIB-212ENST00000618977 RB1CC1Q8TDY2 1594 aa19.75■□□□□ 0.75
PKIB-212ENST00000618977 MAPK8IP2Q13387 824 aaPredicted RBP19.73■□□□□ 0.75
PKIB-212ENST00000618977 PABPN1Q86U42 306 aaKnown RBP eCLIP19.67■□□□□ 0.74
PKIB-212ENST00000618977 PPP4R3CPQ6ZMV5 832 aa19.61■□□□□ 0.73
PKIB-212ENST00000618977 DMRT2Q9Y5R5 561 aa19.52■□□□□ 0.72
PKIB-212ENST00000618977 NACADO15069 1562 aa19.5■□□□□ 0.71
PKIB-212ENST00000618977 DNAJC5Q9H3Z4 198 aa19.38■□□□□ 0.69
PKIB-212ENST00000618977 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
PKIB-212ENST00000618977 BICRAQ9NZM4 1560 aa19.27■□□□□ 0.67
PKIB-212ENST00000618977 UNC13AQ9UPW8 1703 aa19.17■□□□□ 0.66
PKIB-212ENST00000618977 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
PKIB-212ENST00000618977 CECR2Q9BXF3 1484 aa19.12■□□□□ 0.65
PKIB-212ENST00000618977 MYO15BQ96JP2 1530 aa19.07■□□□□ 0.64
PKIB-212ENST00000618977 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
PKIB-212ENST00000618977 CC2D2AQ9P2K1 1620 aa19■□□□□ 0.63
PKIB-212ENST00000618977 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
PKIB-212ENST00000618977 HOXD11P31277 338 aaPredicted RBP18.9■□□□□ 0.62
PKIB-212ENST00000618977 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
PKIB-212ENST00000618977 DCAF8L1A6NGE4 600 aa18.87■□□□□ 0.61
PKIB-212ENST00000618977 EIF4G1Q04637 1599 aaKnown RBP18.82■□□□□ 0.6
PKIB-212ENST00000618977 NPM3O75607 178 aaKnown RBP18.64■□□□□ 0.57
PKIB-212ENST00000618977 KCNA4P22459 653 aa18.58■□□□□ 0.56
PKIB-212ENST00000618977 DCAF1Q9Y4B6 1507 aa18.57■□□□□ 0.56
PKIB-212ENST00000618977 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
PKIB-212ENST00000618977 ZCCHC6Q5VYS8 1495 aaKnown RBP18.51■□□□□ 0.55
PKIB-212ENST00000618977 CUX2O14529 1486 aa18.49■□□□□ 0.55
PKIB-212ENST00000618977 ERCC6Q03468 1493 aa18.25■□□□□ 0.51
PKIB-212ENST00000618977 RNF39Q9H2S5 420 aa18.17■□□□□ 0.5
PKIB-212ENST00000618977 CACNB1Q02641 598 aaPredicted RBP18.16■□□□□ 0.5
PKIB-212ENST00000618977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.15■□□□□ 0.5
PKIB-212ENST00000618977 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
PKIB-212ENST00000618977 NCAPD3P42695 1498 aa18.12■□□□□ 0.49
PKIB-212ENST00000618977 NESP48681 1621 aa17.98■□□□□ 0.47
PKIB-212ENST00000618977 C1QBPQ07021 282 aaKnown RBP17.96■□□□□ 0.47
PKIB-212ENST00000618977 ATAD2BQ9ULI0 1458 aa17.94■□□□□ 0.46
PKIB-212ENST00000618977 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.45
PKIB-212ENST00000618977 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
PKIB-212ENST00000618977 SMARCA2P51531 1590 aa17.75■□□□□ 0.43
PKIB-212ENST00000618977 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
PKIB-212ENST00000618977 U3KPZ7 1027 aaPredicted RBP17.69■□□□□ 0.42
PKIB-212ENST00000618977 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
PKIB-212ENST00000618977 LAMC3Q9Y6N6 1575 aa17.67■□□□□ 0.42
PKIB-212ENST00000618977 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
PKIB-212ENST00000618977 SLC4A1APQ9BWU0 796 aaKnown RBP17.65■□□□□ 0.42
PKIB-212ENST00000618977 SMARCA4P51532 1647 aa17.63■□□□□ 0.41
PKIB-212ENST00000618977 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
PKIB-212ENST00000618977 KIF21AQ7Z4S6 1674 aa17.55■□□□□ 0.4
PKIB-212ENST00000618977 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
PKIB-212ENST00000618977 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
PKIB-212ENST00000618977 PEG3Q9GZU2 1588 aa17.52■□□□□ 0.39
PKIB-212ENST00000618977 WDR62O43379 1518 aa17.49■□□□□ 0.39
PKIB-212ENST00000618977 BAZ1AQ9NRL2 1556 aaPredicted RBP17.47■□□□□ 0.39
PKIB-212ENST00000618977 CAPN15O75808 1086 aa17.41■□□□□ 0.38
PKIB-212ENST00000618977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.39■□□□□ 0.37
PKIB-212ENST00000618977 HNRNPUL2Q1KMD3 747 aaKnown RBP17.39■□□□□ 0.37
PKIB-212ENST00000618977 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
PKIB-212ENST00000618977 APLP2Q06481 763 aa17.35■□□□□ 0.37
PKIB-212ENST00000618977 MROH2BQ7Z745 1585 aa17.35■□□□□ 0.37
PKIB-212ENST00000618977 CEP164Q9UPV0 1460 aa17.31■□□□□ 0.36
PKIB-212ENST00000618977 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
PKIB-212ENST00000618977 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
PKIB-212ENST00000618977 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
PKIB-212ENST00000618977 SAMD1Q6SPF0 538 aaPredicted RBP17.29■□□□□ 0.36
PKIB-212ENST00000618977 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.36
PKIB-212ENST00000618977 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
PKIB-212ENST00000618977 CYB5RLQ6IPT4 315 aa17.25■□□□□ 0.35
PKIB-212ENST00000618977 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
PKIB-212ENST00000618977 ARHGEF11O15085 1522 aa17.24■□□□□ 0.35
PKIB-212ENST00000618977 TRHP20396 242 aaPredicted RBP17.22■□□□□ 0.35
PKIB-212ENST00000618977 URB2Q14146 1524 aaKnown RBP17.17■□□□□ 0.34
PKIB-212ENST00000618977 CFTRP13569 1480 aa17.17■□□□□ 0.34
PKIB-212ENST00000618977 ZNF219Q9P2Y4 722 aaPredicted RBP17.14■□□□□ 0.33
PKIB-212ENST00000618977 DSG3P32926 999 aa17.12■□□□□ 0.33
PKIB-212ENST00000618977 ZNF608Q9ULD9 1512 aaPredicted RBP17.08■□□□□ 0.32
PKIB-212ENST00000618977 ARAP1Q96P48 1450 aa17.05■□□□□ 0.32
PKIB-212ENST00000618977 ZBTB22O15209 634 aa17.04■□□□□ 0.32
PKIB-212ENST00000618977 WIZO95785 1651 aa17.02■□□□□ 0.32
PKIB-212ENST00000618977 IFT140Q96RY7 1462 aa17.02■□□□□ 0.32
PKIB-212ENST00000618977 ABCB7O75027 752 aa17.01■□□□□ 0.31
PKIB-212ENST00000618977 RSF1Q96T23 1441 aaPredicted RBP16.95■□□□□ 0.3
PKIB-212ENST00000618977 FBLN2P98095 1184 aa16.87■□□□□ 0.29
PKIB-212ENST00000618977 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
PKIB-212ENST00000618977 TOPBP1Q92547 1522 aa16.86■□□□□ 0.29
PKIB-212ENST00000618977 EIF4G3O43432 1585 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms