RNA–Protein interactions for RNA: ENST00000321046.9

NR1H4-202, Transcript of nuclear receptor subfamily 1 group H member 4, humanhuman

TSL 1 (best)

Gene NR1H4, Length 1,779 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4-202ENST00000321046 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
NR1H4-202ENST00000321046 CCDC180Q9P1Z9 1646 aa28.44■■■□□ 2.14
NR1H4-202ENST00000321046 ABCC9O60706 1549 aa27.69■■■□□ 2.02
NR1H4-202ENST00000321046 ZCCHC6Q5VYS8 1495 aaKnown RBP26.85■■□□□ 1.89
NR1H4-202ENST00000321046 DCAF8L2P0C7V8 631 aa26.8■■□□□ 1.88
NR1H4-202ENST00000321046 NACADO15069 1562 aa26.67■■□□□ 1.86
NR1H4-202ENST00000321046 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
NR1H4-202ENST00000321046 MYO15BQ96JP2 1530 aa26.56■■□□□ 1.84
NR1H4-202ENST00000321046 DCAF1Q9Y4B6 1507 aa26.55■■□□□ 1.84
NR1H4-202ENST00000321046 UNC13AQ9UPW8 1703 aa26.14■■□□□ 1.77
NR1H4-202ENST00000321046 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
NR1H4-202ENST00000321046 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
NR1H4-202ENST00000321046 BICRAQ9NZM4 1560 aa25.92■■□□□ 1.74
NR1H4-202ENST00000321046 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
NR1H4-202ENST00000321046 DNAJC5BQ9UF47 199 aa25.23■■□□□ 1.63
NR1H4-202ENST00000321046 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
NR1H4-202ENST00000321046 CECR2Q9BXF3 1484 aa25.09■■□□□ 1.61
NR1H4-202ENST00000321046 CC2D2AQ9P2K1 1620 aa25.04■■□□□ 1.6
NR1H4-202ENST00000321046 SMARCA4P51532 1647 aa24.92■■□□□ 1.58
NR1H4-202ENST00000321046 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
NR1H4-202ENST00000321046 MROH2BQ7Z745 1585 aa24.84■■□□□ 1.57
NR1H4-202ENST00000321046 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
NR1H4-202ENST00000321046 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
NR1H4-202ENST00000321046 PEG3Q9GZU2 1588 aa24.63■■□□□ 1.53
NR1H4-202ENST00000321046 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
NR1H4-202ENST00000321046 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
NR1H4-202ENST00000321046 WIZO95785 1651 aa24.59■■□□□ 1.53
NR1H4-202ENST00000321046 HMGXB3Q12766 1538 aa24.53■■□□□ 1.52
NR1H4-202ENST00000321046 BAZ1BQ9UIG0 1483 aaKnown RBP24.52■■□□□ 1.52
NR1H4-202ENST00000321046 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
NR1H4-202ENST00000321046 SUPT5HO00267 1087 aaKnown RBP24.21■■□□□ 1.47
NR1H4-202ENST00000321046 NESP48681 1621 aa24.07■■□□□ 1.44
NR1H4-202ENST00000321046 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
NR1H4-202ENST00000321046 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
NR1H4-202ENST00000321046 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
NR1H4-202ENST00000321046 CFTRP13569 1480 aa23.85■■□□□ 1.41
NR1H4-202ENST00000321046 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
NR1H4-202ENST00000321046 KIF21AQ7Z4S6 1674 aa23.76■■□□□ 1.39
NR1H4-202ENST00000321046 PDS5BQ9NTI5 1447 aa23.75■■□□□ 1.39
NR1H4-202ENST00000321046 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
NR1H4-202ENST00000321046 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
NR1H4-202ENST00000321046 CEP164Q9UPV0 1460 aa23.61■■□□□ 1.37
NR1H4-202ENST00000321046 THOC2Q8NI27 1593 aaKnown RBP23.6■■□□□ 1.37
NR1H4-202ENST00000321046 MRC2Q9UBG0 1479 aa23.53■■□□□ 1.36
NR1H4-202ENST00000321046 URB2Q14146 1524 aaKnown RBP23.46■■□□□ 1.35
NR1H4-202ENST00000321046 WDR62O43379 1518 aa23.46■■□□□ 1.35
NR1H4-202ENST00000321046 CUX2O14529 1486 aa23.41■■□□□ 1.34
NR1H4-202ENST00000321046 TOPBP1Q92547 1522 aa23.34■■□□□ 1.33
NR1H4-202ENST00000321046 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
NR1H4-202ENST00000321046 CUX1P39880 1505 aa23.28■■□□□ 1.32
NR1H4-202ENST00000321046 ABCC8Q09428 1581 aa23.28■■□□□ 1.32
NR1H4-202ENST00000321046 WRNQ14191 1432 aaPredicted RBP eCLIP23.18■■□□□ 1.3
NR1H4-202ENST00000321046 SYNJ1O43426 1573 aa23.17■■□□□ 1.3
NR1H4-202ENST00000321046 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
NR1H4-202ENST00000321046 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
NR1H4-202ENST00000321046 TOP2BQ02880 1626 aa23.11■■□□□ 1.29
NR1H4-202ENST00000321046 BIVM-ERCC5R4GMW8 1640 aa23.1■■□□□ 1.29
NR1H4-202ENST00000321046 RAD54L2Q9Y4B4 1467 aa23.09■■□□□ 1.29
NR1H4-202ENST00000321046 IFT140Q96RY7 1462 aa23.09■■□□□ 1.29
NR1H4-202ENST00000321046 TARBP1Q13395 1621 aaKnown RBP23.07■■□□□ 1.28
NR1H4-202ENST00000321046 ZNF608Q9ULD9 1512 aaPredicted RBP23.06■■□□□ 1.28
NR1H4-202ENST00000321046 SOGA1O94964 1423 aa23.04■■□□□ 1.28
NR1H4-202ENST00000321046 EIF4G3O43432 1585 aaKnown RBP22.96■■□□□ 1.27
NR1H4-202ENST00000321046 WDR97A6NE52 1622 aa22.94■■□□□ 1.26
NR1H4-202ENST00000321046 AQRO60306 1485 aaKnown RBP eCLIP22.94■■□□□ 1.269e-8■■■□□ 15
NR1H4-202ENST00000321046 TDRD9Q8NDG6 1382 aaKnown RBP22.93■■□□□ 1.26
NR1H4-202ENST00000321046 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
NR1H4-202ENST00000321046 ABCA5Q8WWZ7 1642 aa22.82■■□□□ 1.24
NR1H4-202ENST00000321046 TRIM41Q8WV44 630 aa22.79■■□□□ 1.24
NR1H4-202ENST00000321046 GAPVD1Q14C86 1478 aa22.79■■□□□ 1.24
NR1H4-202ENST00000321046 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
NR1H4-202ENST00000321046 GRIN2BQ13224 1484 aa22.73■■□□□ 1.23
NR1H4-202ENST00000321046 SNAPC4Q5SXM2 1469 aa22.73■■□□□ 1.23
NR1H4-202ENST00000321046 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
NR1H4-202ENST00000321046 KIF27Q86VH2 1401 aa22.65■■□□□ 1.22
NR1H4-202ENST00000321046 MAGI1Q96QZ7 1491 aaPredicted RBP22.64■■□□□ 1.21
NR1H4-202ENST00000321046 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
NR1H4-202ENST00000321046 CHD1O14646 1710 aa22.62■■□□□ 1.21
NR1H4-202ENST00000321046 ERICH3Q5RHP9 1530 aa22.61■■□□□ 1.21
NR1H4-202ENST00000321046 FBLN2P98095 1184 aa22.6■■□□□ 1.21
NR1H4-202ENST00000321046 ADAMTS12P58397 1594 aa22.59■■□□□ 1.21
NR1H4-202ENST00000321046 SYNJ2O15056 1496 aa22.57■■□□□ 1.2
NR1H4-202ENST00000321046 IGF1RP08069 1367 aa22.55■■□□□ 1.2
NR1H4-202ENST00000321046 CHMP7Q8WUX9 453 aaPredicted RBP22.53■■□□□ 1.2
NR1H4-202ENST00000321046 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
NR1H4-202ENST00000321046 OSCARQ8IYS5 282 aa22.49■■□□□ 1.19
NR1H4-202ENST00000321046 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
NR1H4-202ENST00000321046 CUL7Q14999 1698 aa22.46■■□□□ 1.19
NR1H4-202ENST00000321046 DNAJC5Q9H3Z4 198 aa22.43■■□□□ 1.18
NR1H4-202ENST00000321046 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
NR1H4-202ENST00000321046 FAM9AQ8IZU1 332 aaPredicted RBP22.4■■□□□ 1.18
NR1H4-202ENST00000321046 CEP170Q5SW79 1584 aa22.39■■□□□ 1.17
NR1H4-202ENST00000321046 CLASP1Q7Z460 1538 aa22.35■■□□□ 1.17
NR1H4-202ENST00000321046 NUP160Q12769 1436 aa22.35■■□□□ 1.17
NR1H4-202ENST00000321046 EEA1Q15075 1411 aa22.33■■□□□ 1.16
NR1H4-202ENST00000321046 CSRNP3Q8WYN3 585 aa22.31■■□□□ 1.16
NR1H4-202ENST00000321046 PRXQ9BXM0 1461 aa22.31■■□□□ 1.16
NR1H4-202ENST00000321046 RAPGEF2Q9Y4G8 1499 aa22.3■■□□□ 1.16
NR1H4-202ENST00000321046 ARHGEF11O15085 1522 aa22.2■■□□□ 1.14
NR1H4-202ENST00000321046 KIAA0586Q9BVV6 1533 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms