RNA–Protein interactions for RNA: ENST00000589768.5

CYTH1-211, Transcript of cytohesin 1, humanhuman

TSL 3

Gene CYTH1, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH1-211ENST00000589768 AEBP2Q6ZN18 517 aaPredicted RBP20.83■□□□□ 0.93
CYTH1-211ENST00000589768 CHIC1Q5VXU3 224 aa19.33■□□□□ 0.68
CYTH1-211ENST00000589768 SENP3Q9H4L4 574 aaPredicted RBP17.78■□□□□ 0.44
CYTH1-211ENST00000589768 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
CYTH1-211ENST00000589768 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
CYTH1-211ENST00000589768 FOXD1Q16676 465 aa16.75■□□□□ 0.27
CYTH1-211ENST00000589768 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
CYTH1-211ENST00000589768 MSH5O43196 834 aa15.89■□□□□ 0.13
CYTH1-211ENST00000589768 PIAS4Q8N2W9 510 aaPredicted RBP15.45■□□□□ 0.06
CYTH1-211ENST00000589768 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
CYTH1-211ENST00000589768 ADRA2BP18089 450 aa15.01□□□□□ -0.01
CYTH1-211ENST00000589768 PLPPR3Q6T4P5 718 aa14.72□□□□□ -0.05
CYTH1-211ENST00000589768 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
CYTH1-211ENST00000589768 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
CYTH1-211ENST00000589768 ABCC9O60706 1549 aa14.16□□□□□ -0.14
CYTH1-211ENST00000589768 MAPK8IP2Q13387 824 aaPredicted RBP14.06□□□□□ -0.16
CYTH1-211ENST00000589768 DMRT2Q9Y5R5 561 aa13.98□□□□□ -0.17
CYTH1-211ENST00000589768 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
CYTH1-211ENST00000589768 NACADO15069 1562 aa13.63□□□□□ -0.23
CYTH1-211ENST00000589768 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
CYTH1-211ENST00000589768 SCAF1Q9H7N4 1312 aaKnown RBP13.58□□□□□ -0.24
CYTH1-211ENST00000589768 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
CYTH1-211ENST00000589768 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
CYTH1-211ENST00000589768 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
CYTH1-211ENST00000589768 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
CYTH1-211ENST00000589768 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
CYTH1-211ENST00000589768 UNC13AQ9UPW8 1703 aa13.38□□□□□ -0.27
CYTH1-211ENST00000589768 SCRIBQ14160 1630 aa13.24□□□□□ -0.29
CYTH1-211ENST00000589768 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
CYTH1-211ENST00000589768 BICRAQ9NZM4 1560 aa13.22□□□□□ -0.29
CYTH1-211ENST00000589768 PABPN1Q86U42 306 aaKnown RBP eCLIP13.18□□□□□ -0.3
CYTH1-211ENST00000589768 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
CYTH1-211ENST00000589768 POTEHQ6S545 545 aa13.13□□□□□ -0.31
CYTH1-211ENST00000589768 SHROOM4Q9ULL8 1493 aa13.12□□□□□ -0.31
CYTH1-211ENST00000589768 DNAJC5BQ9UF47 199 aa12.91□□□□□ -0.34
CYTH1-211ENST00000589768 EIF4G1Q04637 1599 aaKnown RBP12.89□□□□□ -0.35
CYTH1-211ENST00000589768 PPP4R3CPQ6ZMV5 832 aa12.85□□□□□ -0.35
CYTH1-211ENST00000589768 CC2D2AQ9P2K1 1620 aa12.84□□□□□ -0.35
CYTH1-211ENST00000589768 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
CYTH1-211ENST00000589768 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
CYTH1-211ENST00000589768 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
CYTH1-211ENST00000589768 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
CYTH1-211ENST00000589768 BAZ1AQ9NRL2 1556 aaPredicted RBP12.64□□□□□ -0.39
CYTH1-211ENST00000589768 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.59□□□□□ -0.392e-6■■□□□ 14
CYTH1-211ENST00000589768 SMARCA2P51531 1590 aa12.58□□□□□ -0.4
CYTH1-211ENST00000589768 ATAD2BQ9ULI0 1458 aa12.56□□□□□ -0.4
CYTH1-211ENST00000589768 NCAPD3P42695 1498 aa12.54□□□□□ -0.4
CYTH1-211ENST00000589768 MROH2BQ7Z745 1585 aa12.54□□□□□ -0.4
CYTH1-211ENST00000589768 HMGXB3Q12766 1538 aa12.53□□□□□ -0.4
CYTH1-211ENST00000589768 PEG3Q9GZU2 1588 aa12.53□□□□□ -0.4
CYTH1-211ENST00000589768 BAZ1BQ9UIG0 1483 aaKnown RBP12.48□□□□□ -0.41
CYTH1-211ENST00000589768 WIZO95785 1651 aa12.42□□□□□ -0.42
CYTH1-211ENST00000589768 DSG3P32926 999 aa12.42□□□□□ -0.42
CYTH1-211ENST00000589768 RSF1Q96T23 1441 aaPredicted RBP12.37□□□□□ -0.43
CYTH1-211ENST00000589768 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
CYTH1-211ENST00000589768 CAPN15O75808 1086 aa12.34□□□□□ -0.43
CYTH1-211ENST00000589768 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
CYTH1-211ENST00000589768 LAMC3Q9Y6N6 1575 aa12.25□□□□□ -0.45
CYTH1-211ENST00000589768 NESP48681 1621 aa12.25□□□□□ -0.45
CYTH1-211ENST00000589768 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
CYTH1-211ENST00000589768 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
CYTH1-211ENST00000589768 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
CYTH1-211ENST00000589768 KIF21AQ7Z4S6 1674 aa12.16□□□□□ -0.46
CYTH1-211ENST00000589768 PDS5BQ9NTI5 1447 aa12.14□□□□□ -0.47
CYTH1-211ENST00000589768 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
CYTH1-211ENST00000589768 THOC2Q8NI27 1593 aaKnown RBP12.12□□□□□ -0.47
CYTH1-211ENST00000589768 CCDC88BA6NC98 1476 aa12.11□□□□□ -0.47
CYTH1-211ENST00000589768 CUX2O14529 1486 aa12.11□□□□□ -0.47
CYTH1-211ENST00000589768 CFTRP13569 1480 aa12.11□□□□□ -0.47
CYTH1-211ENST00000589768 FANCD2Q9BXW9 1451 aa12.06□□□□□ -0.48
CYTH1-211ENST00000589768 CEP164Q9UPV0 1460 aa12.06□□□□□ -0.48
CYTH1-211ENST00000589768 MRC2Q9UBG0 1479 aa12.04□□□□□ -0.48
CYTH1-211ENST00000589768 NCBP3Q53F19 620 aaKnown RBP12.04□□□□□ -0.48
CYTH1-211ENST00000589768 SUPT5HO00267 1087 aaKnown RBP12.02□□□□□ -0.49
CYTH1-211ENST00000589768 ABCB7O75027 752 aa12.02□□□□□ -0.49
CYTH1-211ENST00000589768 WDR62O43379 1518 aa12.01□□□□□ -0.49
CYTH1-211ENST00000589768 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
CYTH1-211ENST00000589768 NPM3O75607 178 aaKnown RBP11.94□□□□□ -0.5
CYTH1-211ENST00000589768 URB2Q14146 1524 aaKnown RBP11.94□□□□□ -0.5
CYTH1-211ENST00000589768 CHRDL2Q6WN34 429 aa11.93□□□□□ -0.5
CYTH1-211ENST00000589768 SP7Q8TDD2 431 aaPredicted RBP11.91□□□□□ -0.5
CYTH1-211ENST00000589768 DNMBPQ6XZF7 1577 aa11.88□□□□□ -0.51
CYTH1-211ENST00000589768 TOPBP1Q92547 1522 aa11.87□□□□□ -0.51
CYTH1-211ENST00000589768 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
CYTH1-211ENST00000589768 ZNF219Q9P2Y4 722 aaPredicted RBP11.8□□□□□ -0.52
CYTH1-211ENST00000589768 IFT140Q96RY7 1462 aa11.8□□□□□ -0.52
CYTH1-211ENST00000589768 RBM42Q9BTD8 480 aaKnown RBP11.79□□□□□ -0.52
CYTH1-211ENST00000589768 CUX1P39880 1505 aa11.78□□□□□ -0.52
CYTH1-211ENST00000589768 POLA1P09884 1462 aaPredicted RBP11.76□□□□□ -0.53
CYTH1-211ENST00000589768 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
CYTH1-211ENST00000589768 FGD5Q6ZNL6 1462 aa11.74□□□□□ -0.53
CYTH1-211ENST00000589768 EIF4G3O43432 1585 aaKnown RBP11.73□□□□□ -0.53
CYTH1-211ENST00000589768 ZNF608Q9ULD9 1512 aaPredicted RBP11.73□□□□□ -0.53
CYTH1-211ENST00000589768 BIVM-ERCC5R4GMW8 1640 aa11.71□□□□□ -0.54
CYTH1-211ENST00000589768 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
CYTH1-211ENST00000589768 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
CYTH1-211ENST00000589768 WRNQ14191 1432 aaPredicted RBP eCLIP11.69□□□□□ -0.54
CYTH1-211ENST00000589768 TOP2BQ02880 1626 aa11.69□□□□□ -0.54
CYTH1-211ENST00000589768 SYNJ1O43426 1573 aa11.69□□□□□ -0.54
CYTH1-211ENST00000589768 SOGA1O94964 1423 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms