Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 MMS21YEL019C 804 nt8.17□□□□□ -1.1
TY1A-LR2P0CX72 PUS2YGL063W 1113 nt8.17□□□□□ -1.1
TY1A-LR2P0CX72 YIL100C-AYIL100C-A 339 nt8.17□□□□□ -1.1
TY1A-LR2P0CX72 OCA1YNL099C 717 nt8.17□□□□□ -1.1
TY1A-LR2P0CX72 YPL168WYPL168W 1293 nt8.17□□□□□ -1.1
TY1A-LR2P0CX72 YPR150WYPR150W 522 nt8.17□□□□□ -1.1
TY1A-LR2P0CX72 PCL10YGL134W 1302 nt8.16□□□□□ -1.1
TY1A-LR2P0CX72 NPL6YMR091C 1308 nt8.16□□□□□ -1.1
TY1A-LR2P0CX72 PTH1YHR189W 573 nt8.15□□□□□ -1.1
TY1A-LR2P0CX72 UBX6YJL048C 1191 nt8.15□□□□□ -1.1
TY1A-LR2P0CX72 YLR460CYLR460C 1131 nt8.15□□□□□ -1.1
TY1A-LR2P0CX72 TAF4YMR005W 1167 nt8.15□□□□□ -1.1
TY1A-LR2P0CX72 PRE2YPR103W 864 nt8.15□□□□□ -1.1
TY1A-LR2P0CX72 MLS1YNL117W 1665 nt8.14□□□□□ -1.11
TY1A-LR2P0CX72 KES1YPL145C 1305 nt8.14□□□□□ -1.11
TY1A-LR2P0CX72 AI3Q0060 1248 nt8.14□□□□□ -1.11
TY1A-LR2P0CX72 OPI10YOL032W 741 nt8.14□□□□□ -1.11
TY1A-LR2P0CX72 LSB6YJL100W 1824 nt8.14□□□□□ -1.11
TY1A-LR2P0CX72 GTB1YDR221W 2109 nt8.14□□□□□ -1.11
TY1A-LR2P0CX72 DMA2YNL116W 1569 nt8.13□□□□□ -1.11
TY1A-LR2P0CX72 SHM2YLR058C 1410 nt8.12□□□□□ -1.11
TY1A-LR2P0CX72 DAT1YML113W 747 nt8.12□□□□□ -1.11
TY1A-LR2P0CX72 ALD5YER073W 1563 nt8.11□□□□□ -1.11
TY1A-LR2P0CX72 YHR218WYHR218W 1812 nt8.11□□□□□ -1.11
TY1A-LR2P0CX72 MRPL36YBR122C 534 nt8.11□□□□□ -1.11
TY1A-LR2P0CX72 HXK1YFR053C 1458 nt8.11□□□□□ -1.11
TY1A-LR2P0CX72 DBP1YPL119C 1854 nt8.11□□□□□ -1.11
TY1A-LR2P0CX72 BET2YPR176C 978 nt8.1□□□□□ -1.11
TY1A-LR2P0CX72 YPL277CYPL277C 1464 nt8.1□□□□□ -1.11
TY1A-LR2P0CX72 CCT2YIL142W 1584 nt8.1□□□□□ -1.11
TY1A-LR2P0CX72 SHY1YGR112W 1170 nt8.09□□□□□ -1.11
TY1A-LR2P0CX72 CTR1YPR124W 1221 nt8.09□□□□□ -1.11
TY1A-LR2P0CX72 HDA1YNL021W 2121 nt8.09□□□□□ -1.11
TY1A-LR2P0CX72 YER147C-AYER147C-A 411 nt8.08□□□□□ -1.12
TY1A-LR2P0CX72 NIT1YIL164C 600 nt8.08□□□□□ -1.12
TY1A-LR2P0CX72 CYT1YOR065W 930 nt8.08□□□□□ -1.12
TY1A-LR2P0CX72 THI72YOR192C 1800 nt8.08□□□□□ -1.12
TY1A-LR2P0CX72 DLD2YDL178W 1593 nt8.06□□□□□ -1.12
TY1A-LR2P0CX72 GAP1YKR039W 1809 nt8.06□□□□□ -1.12
TY1A-LR2P0CX72 YHR145CYHR145C 357 nt8.06□□□□□ -1.12
TY1A-LR2P0CX72 MIX17YMR002W 471 nt8.06□□□□□ -1.12
TY1A-LR2P0CX72 NUP57YGR119C 1626 nt8.05□□□□□ -1.12
TY1A-LR2P0CX72 YMR210WYMR210W 1350 nt8.05□□□□□ -1.12
TY1A-LR2P0CX72 YCR102CYCR102C 1107 nt8.04□□□□□ -1.12
TY1A-LR2P0CX72 SUA5YGL169W 1281 nt8.04□□□□□ -1.12
TY1A-LR2P0CX72 YLR235CYLR235C 399 nt8.04□□□□□ -1.12
TY1A-LR2P0CX72 LYS12YIL094C 1116 nt8.03□□□□□ -1.12
TY1A-LR2P0CX72 EHD3YDR036C 1503 nt8.03□□□□□ -1.12
TY1A-LR2P0CX72 YNL040WYNL040W 1371 nt8.02□□□□□ -1.13
TY1A-LR2P0CX72 SAM35YHR083W 990 nt8.02□□□□□ -1.13
TY1A-LR2P0CX72 DSE3YOR264W 1293 nt8.02□□□□□ -1.13
TY1A-LR2P0CX72 ODC1YPL134C 933 nt8.02□□□□□ -1.13
TY1A-LR2P0CX72 HXT1YHR094C 1713 nt8.02□□□□□ -1.13
TY1A-LR2P0CX72 YML079WYML079W 606 nt8.01□□□□□ -1.13
TY1A-LR2P0CX72 NDJ1YOL104C 1059 nt8□□□□□ -1.13
TY1A-LR2P0CX72 SVF1YDR346C 1446 nt7.99□□□□□ -1.13
TY1A-LR2P0CX72 COS6YGR295C 1146 nt7.99□□□□□ -1.13
TY1A-LR2P0CX72 BDH1YAL060W 1149 nt7.98□□□□□ -1.13
TY1A-LR2P0CX72 ZTA1YBR046C 1005 nt7.98□□□□□ -1.13
TY1A-LR2P0CX72 MAK32YCR019W 1092 nt7.97□□□□□ -1.13
TY1A-LR2P0CX72 MRP20YDR405W 792 nt7.97□□□□□ -1.13
TY1A-LR2P0CX72 YPR064WYPR064W 420 nt7.97□□□□□ -1.13
TY1A-LR2P0CX72 MEP3YPR138C 1470 nt7.97□□□□□ -1.13
TY1A-LR2P0CX72 SSL2YIL143C 2532 nt7.97□□□□□ -1.13
TY1A-LR2P0CX72 MTO1YGL236C 2010 nt7.96□□□□□ -1.13
TY1A-LR2P0CX72 SHH4YLR164W 507 nt7.96□□□□□ -1.14
TY1A-LR2P0CX72 BUD31YCR063W 474 nt7.95□□□□□ -1.14
TY1A-LR2P0CX72 CWC15YDR163W 528 nt7.95□□□□□ -1.14
TY1A-LR2P0CX72 tM(CAU)CtM(CAU)C 72 nt7.95□□□□□ -1.14
TY1A-LR2P0CX72 IMT4tM(CAU)E 72 nt7.95□□□□□ -1.14
TY1A-LR2P0CX72 IMT3tM(CAU)J3 72 nt7.95□□□□□ -1.14
TY1A-LR2P0CX72 IMT1tM(CAU)O1 72 nt7.95□□□□□ -1.14
TY1A-LR2P0CX72 IMT2tM(CAU)P 72 nt7.95□□□□□ -1.14
TY1A-LR2P0CX72 PEX12YMR026C 1200 nt7.95□□□□□ -1.14
TY1A-LR2P0CX72 PRO1YDR300C 1287 nt7.94□□□□□ -1.14
TY1A-LR2P0CX72 LSC2YGR244C 1284 nt7.94□□□□□ -1.14
TY1A-LR2P0CX72 SED5YLR026C 1023 nt7.94□□□□□ -1.14
TY1A-LR2P0CX72 YLR036CYLR036C 612 nt7.94□□□□□ -1.14
TY1A-LR2P0CX72 TAD3YLR316C 969 nt7.94□□□□□ -1.14
TY1A-LR2P0CX72 LSB5YCL034W 1065 nt7.94□□□□□ -1.14
TY1A-LR2P0CX72 RAI1YGL246C 1164 nt7.93□□□□□ -1.14
TY1A-LR2P0CX72 MGM101YJR144W 810 nt7.93□□□□□ -1.14
TY1A-LR2P0CX72 SGT2YOR007C 1041 nt7.93□□□□□ -1.14
TY1A-LR2P0CX72 MRI1YPR118W 1236 nt7.93□□□□□ -1.14
TY1A-LR2P0CX72 YBL086CYBL086C 1401 nt7.93□□□□□ -1.14
TY1A-LR2P0CX72 RFC1YOR217W 2586 nt7.93□□□□□ -1.14
TY1A-LR2P0CX72 ACH1YBL015W 1581 nt7.93□□□□□ -1.14
TY1A-LR2P0CX72 MDL2YPL270W 2322 nt7.92□□□□□ -1.14
TY1A-LR2P0CX72 YAL016C-BYAL016C-B 186 nt7.92□□□□□ -1.14
TY1A-LR2P0CX72 URA6YKL024C 615 nt7.92□□□□□ -1.14
TY1A-LR2P0CX72 DIF1YLR437C 402 nt7.92□□□□□ -1.14
TY1A-LR2P0CX72 HXT10YFL011W 1641 nt7.92□□□□□ -1.14
TY1A-LR2P0CX72 UFO1YML088W 2007 nt7.91□□□□□ -1.14
TY1A-LR2P0CX72 YMR114CYMR114C 1107 nt7.91□□□□□ -1.14
TY1A-LR2P0CX72 MRS6YOR370C 1812 nt7.91□□□□□ -1.14
TY1A-LR2P0CX72 ESBP6YNL125C 2022 nt7.91□□□□□ -1.14
TY1A-LR2P0CX72 ILV2YMR108W 2064 nt7.9□□□□□ -1.14
TY1A-LR2P0CX72 RET2YFR051C 1641 nt7.9□□□□□ -1.14
TY1A-LR2P0CX72 GID8YMR135C 1368 nt7.9□□□□□ -1.14
TY1A-LR2P0CX72 TIM17YJL143W 477 nt7.9□□□□□ -1.14
Retrieved 100 of 7,029 protein–RNA pairs in 24 ms