Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 DMA2YNL116W 1569 nt9.67□□□□□ -0.86
RAD3P06839 ARO8YGL202W 1503 nt9.66□□□□□ -0.86
RAD3P06839 YIL100C-AYIL100C-A 339 nt9.66□□□□□ -0.86
RAD3P06839 MSB4YOL112W 1479 nt9.66□□□□□ -0.86
RAD3P06839 YPI1YFR003C 468 nt9.65□□□□□ -0.86
RAD3P06839 ADH1YOL086C 1047 nt9.65□□□□□ -0.86
RAD3P06839 YPL222C-AYPL222C-A 246 nt9.65□□□□□ -0.86
RAD3P06839 YBL086CYBL086C 1401 nt9.65□□□□□ -0.87
RAD3P06839 ILV2YMR108W 2064 nt9.63□□□□□ -0.87
RAD3P06839 MEP3YPR138C 1470 nt9.63□□□□□ -0.87
RAD3P06839 RSC8YFR037C 1674 nt9.63□□□□□ -0.87
RAD3P06839 SGA1YIL099W 1650 nt9.62□□□□□ -0.87
RAD3P06839 KES1YPL145C 1305 nt9.61□□□□□ -0.87
RAD3P06839 YER190C-AYER190C-A 576 nt9.61□□□□□ -0.87
RAD3P06839 YGR296C-AYGR296C-A 576 nt9.61□□□□□ -0.87
RAD3P06839 YML133W-AYML133W-A 576 nt9.61□□□□□ -0.87
RAD3P06839 YNL339W-AYNL339W-A 576 nt9.61□□□□□ -0.87
RAD3P06839 YOR072WYOR072W 315 nt9.61□□□□□ -0.87
RAD3P06839 YPL283W-AYPL283W-A 576 nt9.61□□□□□ -0.87
RAD3P06839 ESBP6YNL125C 2022 nt9.6□□□□□ -0.87
RAD3P06839 BET2YPR176C 978 nt9.6□□□□□ -0.87
RAD3P06839 ADH7YCR105W 1086 nt9.59□□□□□ -0.87
RAD3P06839 LIP1YMR298W 453 nt9.59□□□□□ -0.87
RAD3P06839 OPI10YOL032W 741 nt9.58□□□□□ -0.88
RAD3P06839 GND1YHR183W 1470 nt9.58□□□□□ -0.88
RAD3P06839 GAL2YLR081W 1725 nt9.57□□□□□ -0.88
RAD3P06839 SED1YDR077W 1017 nt9.57□□□□□ -0.88
RAD3P06839 URA6YKL024C 615 nt9.57□□□□□ -0.88
RAD3P06839 UFO1YML088W 2007 nt9.56□□□□□ -0.88
RAD3P06839 YEL008WYEL008W 381 nt9.56□□□□□ -0.88
RAD3P06839 YAR028WYAR028W 705 nt9.56□□□□□ -0.88
RAD3P06839 CWC15YDR163W 528 nt9.55□□□□□ -0.88
RAD3P06839 PAU15YIR041W 375 nt9.55□□□□□ -0.88
RAD3P06839 YHR218WYHR218W 1812 nt9.54□□□□□ -0.88
RAD3P06839 LOT5YKL183W 921 nt9.54□□□□□ -0.88
RAD3P06839 PCP1YGR101W 1041 nt9.53□□□□□ -0.88
RAD3P06839 MTG2YHR168W 1557 nt9.53□□□□□ -0.88
RAD3P06839 MTO1YGL236C 2010 nt9.53□□□□□ -0.88
RAD3P06839 CCT2YIL142W 1584 nt9.52□□□□□ -0.89
RAD3P06839 ALP1YNL270C 1722 nt9.51□□□□□ -0.89
RAD3P06839 LEU9YOR108W 1815 nt9.51□□□□□ -0.89
RAD3P06839 MEX67YPL169C 1800 nt9.49□□□□□ -0.89
RAD3P06839 MDL2YPL270W 2322 nt9.48□□□□□ -0.89
RAD3P06839 ZAP1YJL056C 2643 nt9.48□□□□□ -0.89
RAD3P06839 CPD1YGR247W 720 nt9.48□□□□□ -0.89
RAD3P06839 YPL251WYPL251W 303 nt9.48□□□□□ -0.89
RAD3P06839 ESS1YJR017C 513 nt9.47□□□□□ -0.89
RAD3P06839 TOA2YKL058W 369 nt9.47□□□□□ -0.89
RAD3P06839 OYE3YPL171C 1203 nt9.47□□□□□ -0.89
RAD3P06839 BRR1YPR057W 1026 nt9.47□□□□□ -0.89
RAD3P06839 LSB6YJL100W 1824 nt9.47□□□□□ -0.89
RAD3P06839 FCY21YER060W 1587 nt9.46□□□□□ -0.89
RAD3P06839 ZTA1YBR046C 1005 nt9.46□□□□□ -0.9
RAD3P06839 DTR1YBR180W 1719 nt9.45□□□□□ -0.9
RAD3P06839 APT2YDR441C 546 nt9.44□□□□□ -0.9
RAD3P06839 ODC1YPL134C 933 nt9.44□□□□□ -0.9
RAD3P06839 AKR2YOR034C 2250 nt9.44□□□□□ -0.9
RAD3P06839 PET8YNL003C 855 nt9.43□□□□□ -0.9
RAD3P06839 GPN2YOR262W 1044 nt9.43□□□□□ -0.9
RAD3P06839 GND2YGR256W 1479 nt9.42□□□□□ -0.9
RAD3P06839 ACH1YBL015W 1581 nt9.41□□□□□ -0.9
RAD3P06839 SMM1YNR015W 1155 nt9.41□□□□□ -0.9
RAD3P06839 HXT12YIL170W 1374 nt9.4□□□□□ -0.9
RAD3P06839 TOK1YJL093C 2076 nt9.4□□□□□ -0.9
RAD3P06839 TRT2tT(CGU)K 72 nt9.4□□□□□ -0.9
RAD3P06839 LSB3YFR024C-A 1380 nt9.39□□□□□ -0.91
RAD3P06839 SPP2YOR148C 558 nt9.39□□□□□ -0.91
RAD3P06839 FMS1YMR020W 1527 nt9.39□□□□□ -0.91
RAD3P06839 tS(GCU)LtS(GCU)L 80 nt9.37□□□□□ -0.91
RAD3P06839 HXT10YFL011W 1641 nt9.35□□□□□ -0.91
RAD3P06839 YMR103CYMR103C 363 nt9.35□□□□□ -0.91
RAD3P06839 FLR1YBR008C 1647 nt9.34□□□□□ -0.91
RAD3P06839 NAP1YKR048C 1254 nt9.33□□□□□ -0.92
RAD3P06839 RIB2YOL066C 1776 nt9.32□□□□□ -0.92
RAD3P06839 YPS3YLR121C 1527 nt9.32□□□□□ -0.92
RAD3P06839 QDR2YIL121W 1629 nt9.32□□□□□ -0.92
RAD3P06839 RFC1YOR217W 2586 nt9.31□□□□□ -0.92
RAD3P06839 PRY1YJL079C 900 nt9.31□□□□□ -0.92
RAD3P06839 SSL2YIL143C 2532 nt9.29□□□□□ -0.92
RAD3P06839 VPS62YGR141W 1404 nt9.29□□□□□ -0.92
RAD3P06839 SAM2YDR502C 1155 nt9.28□□□□□ -0.92
RAD3P06839 UFD1YGR048W 1086 nt9.28□□□□□ -0.92
RAD3P06839 LSB5YCL034W 1065 nt9.28□□□□□ -0.92
RAD3P06839 GID8YMR135C 1368 nt9.27□□□□□ -0.93
RAD3P06839 NBA1YOL070C 1506 nt9.27□□□□□ -0.93
RAD3P06839 SEN2YLR105C 1134 nt9.27□□□□□ -0.93
RAD3P06839 PUP1YOR157C 786 nt9.27□□□□□ -0.93
RAD3P06839 YBR232CYBR232C 360 nt9.27□□□□□ -0.93
RAD3P06839 DLD2YDL178W 1593 nt9.27□□□□□ -0.93
RAD3P06839 YDL086WYDL086W 822 nt9.26□□□□□ -0.93
RAD3P06839 MDM35YKL053C-A 261 nt9.26□□□□□ -0.93
RAD3P06839 PHO23YNL097C 993 nt9.26□□□□□ -0.93
RAD3P06839 DIG1YPL049C 1359 nt9.25□□□□□ -0.93
RAD3P06839 TPN1YGL186C 1740 nt9.25□□□□□ -0.93
RAD3P06839 VRG4YGL225W 1014 nt9.25□□□□□ -0.93
RAD3P06839 PGC1YPL206C 966 nt9.25□□□□□ -0.93
RAD3P06839 DAK2YFL053W 1776 nt9.24□□□□□ -0.93
RAD3P06839 MRS6YOR370C 1812 nt9.24□□□□□ -0.93
RAD3P06839 CCT5YJR064W 1689 nt9.23□□□□□ -0.93
RAD3P06839 LPD1YFL018C 1500 nt9.23□□□□□ -0.93
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms