Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TMEM56-RWDD3S4R434 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 RNF165-205ENST00000588679 2904 ntBASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TMEM56-RWDD3S4R434 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 AP006587.3-201ENST00000525742 1516 ntBASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TMEM56-RWDD3S4R434 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TMEM56-RWDD3S4R434 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TMEM56-RWDD3S4R434 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 AC121338.2-201ENST00000622535 1744 ntBASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 AC010525.1-201ENST00000585559 441 ntBASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 AC027702.1-201ENST00000563810 1770 ntBASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TMEM56-RWDD3S4R434 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM56-RWDD3S4R434 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM56-RWDD3S4R434 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.13■□□□□ 0.33
TMEM56-RWDD3S4R434 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM56-RWDD3S4R434 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM56-RWDD3S4R434 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TMEM56-RWDD3S4R434 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.13■□□□□ 0.33
TMEM56-RWDD3S4R434 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms