Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.46■■□□□ 1.35
BLOC1S4Q9NUP1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
BLOC1S4Q9NUP1 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
BLOC1S4Q9NUP1 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
BLOC1S4Q9NUP1 RARRES2P6-201ENST00000567333 442 ntBASIC23.46■■□□□ 1.35
BLOC1S4Q9NUP1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.46■■□□□ 1.35
BLOC1S4Q9NUP1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.46■■□□□ 1.35
BLOC1S4Q9NUP1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
BLOC1S4Q9NUP1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.45■■□□□ 1.35
BLOC1S4Q9NUP1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.45■■□□□ 1.35
BLOC1S4Q9NUP1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 AC010141.2-201ENST00000452426 721 ntBASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.45■■□□□ 1.34
BLOC1S4Q9NUP1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 AC034268.1-201ENST00000441047 882 ntBASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 AL049796.1-201ENST00000565336 1766 ntBASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
BLOC1S4Q9NUP1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
BLOC1S4Q9NUP1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 AP001160.3-201ENST00000601484 763 ntBASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
BLOC1S4Q9NUP1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
BLOC1S4Q9NUP1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
BLOC1S4Q9NUP1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
BLOC1S4Q9NUP1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
BLOC1S4Q9NUP1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
BLOC1S4Q9NUP1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC23.41■■□□□ 1.34
BLOC1S4Q9NUP1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
BLOC1S4Q9NUP1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
BLOC1S4Q9NUP1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
BLOC1S4Q9NUP1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
BLOC1S4Q9NUP1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.39■■□□□ 1.34
BLOC1S4Q9NUP1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.39■■□□□ 1.34
BLOC1S4Q9NUP1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
BLOC1S4Q9NUP1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.39■■□□□ 1.34
BLOC1S4Q9NUP1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
BLOC1S4Q9NUP1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
BLOC1S4Q9NUP1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms