Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AC013268.1-206ENST00000638368 961 ntBASIC21.42■■□□□ 1.02
CHD5Q8TDI0 AC112229.1-201ENST00000639295 961 ntBASIC21.42■■□□□ 1.02
CHD5Q8TDI0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CHD5Q8TDI0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 AC007322.4-201ENST00000509611 723 ntBASIC21.41■■□□□ 1.02
CHD5Q8TDI0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 BID-214ENST00000617586 542 ntTSL 5 BASIC21.41■■□□□ 1.02
CHD5Q8TDI0 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CHD5Q8TDI0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.4■■□□□ 1.02
CHD5Q8TDI0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CHD5Q8TDI0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.4■■□□□ 1.02
CHD5Q8TDI0 CDCA4P2-201ENST00000441182 718 ntBASIC21.39■■□□□ 1.02
CHD5Q8TDI0 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHD5Q8TDI0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CHD5Q8TDI0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.39■■□□□ 1.02
CHD5Q8TDI0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHD5Q8TDI0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHD5Q8TDI0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHD5Q8TDI0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CHD5Q8TDI0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 MIR663A-201ENST00000385250 93 ntBASIC21.39■■□□□ 1.01
CHD5Q8TDI0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 AC243732.1-201ENST00000612648 864 ntBASIC21.39■■□□□ 1.01
CHD5Q8TDI0 AC010536.3-201ENST00000620306 533 ntBASIC21.39■■□□□ 1.01
CHD5Q8TDI0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CHD5Q8TDI0 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD5Q8TDI0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.38■■□□□ 1.01
CHD5Q8TDI0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD5Q8TDI0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD5Q8TDI0 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CHD5Q8TDI0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CHD5Q8TDI0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 AC026185.1-201ENST00000445748 174 ntBASIC21.37■■□□□ 1.01
CHD5Q8TDI0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.37■■□□□ 1.01
CHD5Q8TDI0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 AL050303.2-201ENST00000619798 666 ntBASIC21.36■■□□□ 1.01
CHD5Q8TDI0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 AC120498.10-201ENST00000621827 505 ntBASIC21.36■■□□□ 1.01
CHD5Q8TDI0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.36■■□□□ 1.01
CHD5Q8TDI0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 AC231657.2-201ENST00000624556 255 ntBASIC21.35■■□□□ 1.01
CHD5Q8TDI0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.35■■□□□ 1.01
CHD5Q8TDI0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms