Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 YCR015CYCR015C 954 nt2.07□□□□□ -2.08
SHH3Q04487 SCL1YGL011C 759 nt2.07□□□□□ -2.08
SHH3Q04487 MRPL6YHR147C 645 nt2.07□□□□□ -2.08
SHH3Q04487 BAT1YHR208W 1182 nt2.07□□□□□ -2.08
SHH3Q04487 THI80YOR143C 960 nt2.07□□□□□ -2.08
SHH3Q04487 SOK1YDR006C 2706 nt2.07□□□□□ -2.08
SHH3Q04487 SKO1YNL167C 1944 nt2.07□□□□□ -2.08
SHH3Q04487 DSF2YBR007C 2211 nt2.06□□□□□ -2.08
SHH3Q04487 DNL4YOR005C 2835 nt2.06□□□□□ -2.08
SHH3Q04487 YKL100CYKL100C 1764 nt2.06□□□□□ -2.08
SHH3Q04487 NHP10YDL002C 612 nt2.06□□□□□ -2.08
SHH3Q04487 TSC13YDL015C 933 nt2.06□□□□□ -2.08
SHH3Q04487 MST28YAR033W 705 nt2.06□□□□□ -2.08
SHH3Q04487 YLR311CYLR311C 348 nt2.06□□□□□ -2.08
SHH3Q04487 ILV5YLR355C 1188 nt2.06□□□□□ -2.08
SHH3Q04487 PSY3YLR376C 729 nt2.06□□□□□ -2.08
SHH3Q04487 DBP10YDL031W 2988 nt2.06□□□□□ -2.08
SHH3Q04487 HFM1YGL251C 3564 nt2.05□□□□□ -2.08
SHH3Q04487 PDR1YGL013C 3207 nt2.05□□□□□ -2.08
SHH3Q04487 SIP3YNL257C 3690 nt2.05□□□□□ -2.08
SHH3Q04487 RNH202YDR279W 1053 nt2.05□□□□□ -2.08
SHH3Q04487 RPL8BYLL045C 771 nt2.05□□□□□ -2.08
SHH3Q04487 YLR154W-EYLR154W-E 204 nt2.05□□□□□ -2.08
SHH3Q04487 YML047W-AYML047W-A 366 nt2.05□□□□□ -2.08
SHH3Q04487 YOR055WYOR055W 435 nt2.05□□□□□ -2.08
SHH3Q04487 YOR097CYOR097C 528 nt2.05□□□□□ -2.08
SHH3Q04487 POL30YBR088C 777 nt2.05□□□□□ -2.08
SHH3Q04487 YSA1YBR111C 696 nt2.05□□□□□ -2.08
SHH3Q04487 SWD3YBR175W 948 nt2.05□□□□□ -2.08
SHH3Q04487 VMA9YCL005W-A 222 nt2.05□□□□□ -2.08
SHH3Q04487 NUF2YOL069W 1356 nt2.05□□□□□ -2.08
SHH3Q04487 YCK2YNL154C 1641 nt2.05□□□□□ -2.08
SHH3Q04487 YJL132WYJL132W 2253 nt2.05□□□□□ -2.08
SHH3Q04487 ORC1YML065W 2745 nt2.04□□□□□ -2.08
SHH3Q04487 TRA1YHR099W 11235 nt2.04□□□□□ -2.08
SHH3Q04487 RPL27BYDR471W 411 nt2.04□□□□□ -2.08
SHH3Q04487 YGL138CYGL138C 1038 nt2.04□□□□□ -2.08
SHH3Q04487 YKL165C-AYKL165C-A 234 nt2.04□□□□□ -2.08
SHH3Q04487 EAP1YKL204W 1899 nt2.04□□□□□ -2.08
SHH3Q04487 BET3YKR068C 582 nt2.04□□□□□ -2.08
SHH3Q04487 MTD1YKR080W 963 nt2.04□□□□□ -2.08
SHH3Q04487 VMA6YLR447C 1038 nt2.04□□□□□ -2.08
SHH3Q04487 VPS9YML097C 1356 nt2.04□□□□□ -2.08
SHH3Q04487 YOL098CYOL098C 3114 nt2.04□□□□□ -2.08
SHH3Q04487 ARF3YOR094W 552 nt2.04□□□□□ -2.08
SHH3Q04487 SVL3YPL032C 2478 nt2.04□□□□□ -2.08
SHH3Q04487 TAF2YCR042C 4224 nt2.04□□□□□ -2.08
SHH3Q04487 CWH41YGL027C 2502 nt2.03□□□□□ -2.08
SHH3Q04487 NMA111YNL123W 2994 nt2.03□□□□□ -2.08
SHH3Q04487 FAR11YNL127W 2862 nt2.03□□□□□ -2.08
SHH3Q04487 YJR061WYJR061W 2808 nt2.03□□□□□ -2.08
SHH3Q04487 RRG1YDR065W 1098 nt2.03□□□□□ -2.08
SHH3Q04487 ARI1YGL157W 1044 nt2.03□□□□□ -2.08
SHH3Q04487 YLR347W-AYLR347W-A 141 nt2.03□□□□□ -2.08
SHH3Q04487 YLR400WYLR400W 474 nt2.03□□□□□ -2.08
SHH3Q04487 YNL035CYNL035C 1170 nt2.03□□□□□ -2.08
SHH3Q04487 SSP2YOR242C 1116 nt2.03□□□□□ -2.08
SHH3Q04487 21S_rRNA21S_rRNA 3296 nt2.02□□□□□ -2.09
SHH3Q04487 ISC10YER180C 804 nt2.02□□□□□ -2.09
SHH3Q04487 PEX4YGR133W 552 nt2.02□□□□□ -2.09
SHH3Q04487 YIL161WYIL161W 708 nt2.02□□□□□ -2.09
SHH3Q04487 SUB1YMR039C 879 nt2.02□□□□□ -2.09
SHH3Q04487 HRT1YOL133W 366 nt2.02□□□□□ -2.09
SHH3Q04487 HAT1YPL001W 1125 nt2.02□□□□□ -2.09
SHH3Q04487 YPR074W-AYPR074W-A 171 nt2.02□□□□□ -2.09
SHH3Q04487 YBR209WYBR209W 318 nt2.02□□□□□ -2.09
SHH3Q04487 MPS1YDL028C 2295 nt2.02□□□□□ -2.09
SHH3Q04487 ENP2YGR145W 2124 nt2.02□□□□□ -2.09
SHH3Q04487 AVT2YEL064C 1443 nt2.01□□□□□ -2.09
SHH3Q04487 MRPL9YGR220C 810 nt2.01□□□□□ -2.09
SHH3Q04487 YHR180W-AYHR180W-A 183 nt2.01□□□□□ -2.09
SHH3Q04487 LSM8YJR022W 330 nt2.01□□□□□ -2.09
SHH3Q04487 USB1YLR132C 873 nt2.01□□□□□ -2.09
SHH3Q04487 COX14YML129C 213 nt2.01□□□□□ -2.09
SHH3Q04487 ATG34YOL083W 1239 nt2.01□□□□□ -2.09
SHH3Q04487 MSN1YOL116W 1149 nt2.01□□□□□ -2.09
SHH3Q04487 MUM2YBR057C 1101 nt2.01□□□□□ -2.09
SHH3Q04487 TIM12YBR091C 330 nt2.01□□□□□ -2.09
SHH3Q04487 SIN3YOL004W 4611 nt2.01□□□□□ -2.09
SHH3Q04487 IRC3YDR332W 2070 nt2.01□□□□□ -2.09
SHH3Q04487 YDR261W-BYDR261W-B 5313 nt2.01□□□□□ -2.09
SHH3Q04487 YFL002W-AYFL002W-A 5313 nt2.01□□□□□ -2.09
SHH3Q04487 YGR161W-BYGR161W-B 5313 nt2.01□□□□□ -2.09
SHH3Q04487 YCL019WYCL019W 5313 nt2.01□□□□□ -2.09
SHH3Q04487 YDR186CYDR186C 2634 nt2.01□□□□□ -2.09
SHH3Q04487 MSH4YFL003C 2637 nt2.01□□□□□ -2.09
SHH3Q04487 SUL1YBR294W 2580 nt2□□□□□ -2.09
SHH3Q04487 MRP10YDL045W-A 288 nt2□□□□□ -2.09
SHH3Q04487 YDR222WYDR222W 1248 nt2□□□□□ -2.09
SHH3Q04487 DDI2YFL061W 678 nt2□□□□□ -2.09
SHH3Q04487 RNR2YJL026W 1200 nt2□□□□□ -2.09
SHH3Q04487 MCR1YKL150W 909 nt2□□□□□ -2.09
SHH3Q04487 SPC24YMR117C 642 nt2□□□□□ -2.09
SHH3Q04487 YOL166CYOL166C 339 nt2□□□□□ -2.09
SHH3Q04487 STH1YIL126W 4080 nt2□□□□□ -2.09
SHH3Q04487 FKS3YMR306W 5358 nt2□□□□□ -2.09
SHH3Q04487 KRE33YNL132W 3171 nt2□□□□□ -2.09
SHH3Q04487 MCD1YDL003W 1701 nt2□□□□□ -2.09
SHH3Q04487 PSP1YDR505C 2526 nt1.99□□□□□ -2.09
SHH3Q04487 YIL080WYIL080W 4722 nt1.99□□□□□ -2.09
Retrieved 100 of 7,029 protein–RNA pairs in 25.5 ms