Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 LRP1YHR081W 555 nt4.03□□□□□ -1.76
SSL2Q00578 YJR011CYJR011C 786 nt4.03□□□□□ -1.76
SSL2Q00578 YKL162C-AYKL162C-A 153 nt4.03□□□□□ -1.76
SSL2Q00578 YPL135C-AYPL135C-A 174 nt4.03□□□□□ -1.76
SSL2Q00578 NRP1YDL167C 2160 nt4.03□□□□□ -1.76
SSL2Q00578 EPO1YMR124W 2832 nt4.03□□□□□ -1.76
SSL2Q00578 PIG2YIL045W 1617 nt4.03□□□□□ -1.77
SSL2Q00578 EMC1YCL045C 2283 nt4.02□□□□□ -1.77
SSL2Q00578 RTT109YLL002W 1311 nt4.02□□□□□ -1.77
SSL2Q00578 ISM1YPL040C 3009 nt4.02□□□□□ -1.77
SSL2Q00578 YDR381C-AYDR381C-A 345 nt4.02□□□□□ -1.77
SSL2Q00578 DSE2YHR143W 978 nt4.02□□□□□ -1.77
SSL2Q00578 YML003WYML003W 873 nt4.02□□□□□ -1.77
SSL2Q00578 GLO1YML004C 981 nt4.02□□□□□ -1.77
SSL2Q00578 YMR001C-AYMR001C-A 231 nt4.02□□□□□ -1.77
SSL2Q00578 ARG80YMR042W 534 nt4.02□□□□□ -1.77
SSL2Q00578 IST1YNL265C 897 nt4.02□□□□□ -1.77
SSL2Q00578 YPL034WYPL034W 498 nt4.02□□□□□ -1.77
SSL2Q00578 YBR242WYBR242W 717 nt4.02□□□□□ -1.77
SSL2Q00578 ARP4YJL081C 1470 nt4.02□□□□□ -1.77
SSL2Q00578 CWH43YCR017C 2862 nt4.01□□□□□ -1.77
SSL2Q00578 PRP11YDL043C 801 nt4.01□□□□□ -1.77
SSL2Q00578 YDL187CYDL187C 330 nt4.01□□□□□ -1.77
SSL2Q00578 YDR355CYDR355C 303 nt4.01□□□□□ -1.77
SSL2Q00578 SPO13YHR014W 876 nt4.01□□□□□ -1.77
SSL2Q00578 YJR112W-AYJR112W-A 330 nt4.01□□□□□ -1.77
SSL2Q00578 YPL119C-AYPL119C-A 264 nt4.01□□□□□ -1.77
SSL2Q00578 CTM1YHR109W 1758 nt4.01□□□□□ -1.77
SSL2Q00578 SUC2YIL162W 1599 nt4.01□□□□□ -1.77
SSL2Q00578 SRP1YNL189W 1629 nt4□□□□□ -1.77
SSL2Q00578 YLR352WYLR352W 2424 nt4□□□□□ -1.77
SSL2Q00578 ARO80YDR421W 2853 nt4□□□□□ -1.77
SSL2Q00578 PBP4YDL053C 558 nt4□□□□□ -1.77
SSL2Q00578 CLB3YDL155W 1284 nt4□□□□□ -1.77
SSL2Q00578 tL(UAG)JtL(UAG)J 82 nt4□□□□□ -1.77
SSL2Q00578 tL(UAG)L1tL(UAG)L1 82 nt4□□□□□ -1.77
SSL2Q00578 tL(UAG)L2tL(UAG)L2 82 nt4□□□□□ -1.77
SSL2Q00578 BUR2YLR226W 1188 nt4□□□□□ -1.77
SSL2Q00578 FLD1YLR404W 858 nt4□□□□□ -1.77
SSL2Q00578 SHH3YMR118C 591 nt4□□□□□ -1.77
SSL2Q00578 YBR012CYBR012C 420 nt4□□□□□ -1.77
SSL2Q00578 GCY1YOR120W 939 nt4□□□□□ -1.77
SSL2Q00578 RPA43YOR340C 981 nt4□□□□□ -1.77
SSL2Q00578 YPR022CYPR022C 3402 nt4□□□□□ -1.77
SSL2Q00578 SLA1YBL007C 3735 nt4□□□□□ -1.77
SSL2Q00578 VID27YNL212W 2349 nt3.99□□□□□ -1.77
SSL2Q00578 PRP22YER013W 3438 nt3.99□□□□□ -1.77
SSL2Q00578 MGT1YDL200C 567 nt3.99□□□□□ -1.77
SSL2Q00578 COX13YGL191W 390 nt3.99□□□□□ -1.77
SSL2Q00578 YGR190CYGR190C 366 nt3.99□□□□□ -1.77
SSL2Q00578 YHR097CYHR097C 1101 nt3.99□□□□□ -1.77
SSL2Q00578 YJL119CYJL119C 324 nt3.99□□□□□ -1.77
SSL2Q00578 YKL063CYKL063C 504 nt3.99□□□□□ -1.77
SSL2Q00578 TPK3YKL166C 1197 nt3.99□□□□□ -1.77
SSL2Q00578 RPL18AYOL120C 561 nt3.99□□□□□ -1.77
SSL2Q00578 YOR029WYOR029W 336 nt3.99□□□□□ -1.77
SSL2Q00578 IDH2YOR136W 1110 nt3.99□□□□□ -1.77
SSL2Q00578 YOR293C-AYOR293C-A 150 nt3.99□□□□□ -1.77
SSL2Q00578 SMI1YGR229C 1518 nt3.99□□□□□ -1.77
SSL2Q00578 SPT10YJL127C 1923 nt3.99□□□□□ -1.77
SSL2Q00578 NUP159YIL115C 4383 nt3.98□□□□□ -1.77
SSL2Q00578 SLM2YNL047C 1971 nt3.98□□□□□ -1.77
SSL2Q00578 SEC59YMR013C 1560 nt3.98□□□□□ -1.77
SSL2Q00578 GPI1YGR216C 1830 nt3.98□□□□□ -1.77
SSL2Q00578 RPO31YOR116C 4383 nt3.98□□□□□ -1.77
SSL2Q00578 MON1YGL124C 1935 nt3.98□□□□□ -1.77
SSL2Q00578 CWC2YDL209C 1020 nt3.98□□□□□ -1.77
SSL2Q00578 VMA8YEL051W 771 nt3.98□□□□□ -1.77
SSL2Q00578 YHL048C-AYHL048C-A 135 nt3.98□□□□□ -1.77
SSL2Q00578 COX2Q0250 756 nt3.98□□□□□ -1.77
SSL2Q00578 tV(CAC)DtV(CAC)D 73 nt3.98□□□□□ -1.77
SSL2Q00578 tV(CAC)HtV(CAC)H 73 nt3.98□□□□□ -1.77
SSL2Q00578 RPL16AYIL133C 600 nt3.98□□□□□ -1.77
SSL2Q00578 SDL1YIL167W 633 nt3.98□□□□□ -1.77
SSL2Q00578 YLR290CYLR290C 834 nt3.98□□□□□ -1.77
SSL2Q00578 YMR052C-AYMR052C-A 366 nt3.98□□□□□ -1.77
SSL2Q00578 PEP7YDR323C 1548 nt3.98□□□□□ -1.77
SSL2Q00578 AFR1YDR085C 1863 nt3.98□□□□□ -1.77
SSL2Q00578 YJL049WYJL049W 1353 nt3.98□□□□□ -1.77
SSL2Q00578 PRM15YMR278W 1869 nt3.98□□□□□ -1.77
SSL2Q00578 MSM1YGR171C 1728 nt3.98□□□□□ -1.77
SSL2Q00578 IOC2YLR095C 2439 nt3.97□□□□□ -1.77
SSL2Q00578 CDC5YMR001C 2118 nt3.97□□□□□ -1.77
SSL2Q00578 ECM11YDR446W 909 nt3.97□□□□□ -1.77
SSL2Q00578 VAB2YEL005C 849 nt3.97□□□□□ -1.77
SSL2Q00578 RPS8BYER102W 603 nt3.97□□□□□ -1.77
SSL2Q00578 PUG1YER185W 912 nt3.97□□□□□ -1.77
SSL2Q00578 ASG7YJL170C 630 nt3.97□□□□□ -1.77
SSL2Q00578 YAL026C-AYAL026C-A 438 nt3.97□□□□□ -1.77
SSL2Q00578 ENV10YLR065C 546 nt3.97□□□□□ -1.77
SSL2Q00578 YLR171WYLR171W 390 nt3.97□□□□□ -1.77
SSL2Q00578 YAR047CYAR047C 321 nt3.97□□□□□ -1.77
SSL2Q00578 ARC18YLR370C 537 nt3.97□□□□□ -1.77
SSL2Q00578 RPS8AYBL072C 603 nt3.97□□□□□ -1.77
SSL2Q00578 MRPS9YBR146W 837 nt3.97□□□□□ -1.77
SSL2Q00578 YKL075CYKL075C 1353 nt3.97□□□□□ -1.77
SSL2Q00578 VTC4YJL012C 2166 nt3.97□□□□□ -1.77
SSL2Q00578 SNU56YDR240C 1479 nt3.97□□□□□ -1.77
SSL2Q00578 ACK1YDL203C 1872 nt3.96□□□□□ -1.77
SSL2Q00578 YGR117CYGR117C 1431 nt3.96□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 60 ms