Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
ZC3H6P61129 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ZC3H6P61129 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC28.33■■■□□ 2.13
ZC3H6P61129 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ZC3H6P61129 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ZC3H6P61129 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ZC3H6P61129 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ZC3H6P61129 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
ZC3H6P61129 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC28.33■■■□□ 2.13
ZC3H6P61129 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
ZC3H6P61129 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
ZC3H6P61129 AC091799.1-201ENST00000422823 811 ntBASIC28.33■■■□□ 2.13
ZC3H6P61129 C1QBPP2-201ENST00000528754 825 ntBASIC28.33■■■□□ 2.13
ZC3H6P61129 CYP2T3P-201ENST00000601990 817 ntBASIC28.33■■■□□ 2.13
ZC3H6P61129 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ZC3H6P61129 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ZC3H6P61129 AC139530.1-201ENST00000575312 1977 ntBASIC28.32■■■□□ 2.12
ZC3H6P61129 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ZC3H6P61129 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
ZC3H6P61129 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC28.32■■■□□ 2.12
ZC3H6P61129 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ZC3H6P61129 FAM197Y4-202ENST00000622692 608 ntBASIC28.32■■■□□ 2.12
ZC3H6P61129 HLA-B-256ENST00000639848 1089 ntBASIC28.32■■■□□ 2.12
ZC3H6P61129 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC28.32■■■□□ 2.12
ZC3H6P61129 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC28.32■■■□□ 2.12
ZC3H6P61129 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
ZC3H6P61129 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ZC3H6P61129 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ZC3H6P61129 ECEL1P3-201ENST00000427961 737 ntBASIC28.31■■■□□ 2.12
ZC3H6P61129 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC28.31■■■□□ 2.12
ZC3H6P61129 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC28.31■■■□□ 2.12
ZC3H6P61129 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ZC3H6P61129 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ZC3H6P61129 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
ZC3H6P61129 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZC3H6P61129 AC003102.1-202ENST00000563394 1796 ntBASIC28.3■■■□□ 2.12
ZC3H6P61129 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZC3H6P61129 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZC3H6P61129 RNF121-214ENST00000533380 870 ntTSL 3 BASIC28.3■■■□□ 2.12
ZC3H6P61129 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZC3H6P61129 MIR4497-201ENST00000583208 89 ntBASIC28.3■■■□□ 2.12
ZC3H6P61129 Z99916.2-201ENST00000604037 246 ntBASIC28.3■■■□□ 2.12
ZC3H6P61129 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZC3H6P61129 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZC3H6P61129 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ZC3H6P61129 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
ZC3H6P61129 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC28.29■■■□□ 2.12
ZC3H6P61129 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZC3H6P61129 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZC3H6P61129 AC233263.1-201ENST00000578059 224 ntBASIC28.29■■■□□ 2.12
ZC3H6P61129 FAM21FP-204ENST00000608637 956 ntBASIC28.29■■■□□ 2.12
ZC3H6P61129 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZC3H6P61129 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ZC3H6P61129 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
ZC3H6P61129 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ZC3H6P61129 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC28.28■■■□□ 2.12
ZC3H6P61129 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
ZC3H6P61129 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ZC3H6P61129 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
ZC3H6P61129 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ZC3H6P61129 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC28.28■■■□□ 2.12
ZC3H6P61129 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC28.28■■■□□ 2.12
ZC3H6P61129 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC28.28■■■□□ 2.12
ZC3H6P61129 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC28.28■■■□□ 2.12
ZC3H6P61129 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZC3H6P61129 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ZC3H6P61129 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC28.27■■■□□ 2.12
ZC3H6P61129 LTK-203ENST00000453182 2412 ntTSL 2 BASIC28.27■■■□□ 2.12
ZC3H6P61129 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZC3H6P61129 MIR718-201ENST00000390190 70 ntBASIC28.27■■■□□ 2.12
ZC3H6P61129 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
ZC3H6P61129 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC28.27■■■□□ 2.12
ZC3H6P61129 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC28.27■■■□□ 2.12
ZC3H6P61129 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC28.27■■■□□ 2.12
ZC3H6P61129 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ZC3H6P61129 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ZC3H6P61129 PNMA6B-201ENST00000538162 1200 ntBASIC28.27■■■□□ 2.12
ZC3H6P61129 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC28.27■■■□□ 2.12
ZC3H6P61129 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC28.27■■■□□ 2.12
ZC3H6P61129 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
ZC3H6P61129 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
ZC3H6P61129 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.27■■■□□ 2.12
ZC3H6P61129 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC28.27■■■□□ 2.12
ZC3H6P61129 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ZC3H6P61129 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
ZC3H6P61129 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ZC3H6P61129 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
ZC3H6P61129 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC28.26■■■□□ 2.11
ZC3H6P61129 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZC3H6P61129 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ZC3H6P61129 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC28.26■■■□□ 2.11
ZC3H6P61129 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZC3H6P61129 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC28.25■■■□□ 2.11
ZC3H6P61129 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZC3H6P61129 GXYLT1P3-201ENST00000453058 1193 ntBASIC28.25■■■□□ 2.11
ZC3H6P61129 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZC3H6P61129 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC28.25■■■□□ 2.11
ZC3H6P61129 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC28.25■■■□□ 2.11
ZC3H6P61129 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
ZC3H6P61129 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC28.25■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 650.8 ms