Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CAPNS1P04632 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CAPNS1P04632 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CAPNS1P04632 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CAPNS1P04632 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CAPNS1P04632 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CAPNS1P04632 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CAPNS1P04632 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.89■□□□□ 0.93
CAPNS1P04632 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.89■□□□□ 0.93
CAPNS1P04632 AC098934.4-201ENST00000564127 592 ntBASIC20.89■□□□□ 0.93
CAPNS1P04632 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPNS1P04632 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPNS1P04632 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CAPNS1P04632 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.88■□□□□ 0.93
CAPNS1P04632 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.88■□□□□ 0.93
CAPNS1P04632 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
CAPNS1P04632 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 AC007322.1-201ENST00000426983 750 ntBASIC20.88■□□□□ 0.93
CAPNS1P04632 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.88■□□□□ 0.93
CAPNS1P04632 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CAPNS1P04632 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.88■□□□□ 0.93
CAPNS1P04632 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CAPNS1P04632 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 FAM99A-202ENST00000538190 1989 ntBASIC20.87■□□□□ 0.93
CAPNS1P04632 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.87■□□□□ 0.93
CAPNS1P04632 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.87■□□□□ 0.93
CAPNS1P04632 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CAPNS1P04632 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CAPNS1P04632 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
CAPNS1P04632 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
CAPNS1P04632 AC087742.1-201ENST00000575880 1738 ntBASIC20.87■□□□□ 0.93
CAPNS1P04632 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPNS1P04632 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CAPNS1P04632 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.86■□□□□ 0.93
CAPNS1P04632 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPNS1P04632 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPNS1P04632 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CAPNS1P04632 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CAPNS1P04632 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPNS1P04632 AL596275.1-201ENST00000423464 877 ntBASIC20.86■□□□□ 0.93
CAPNS1P04632 AC098590.1-201ENST00000468126 897 ntBASIC20.86■□□□□ 0.93
CAPNS1P04632 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.86■□□□□ 0.93
CAPNS1P04632 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPNS1P04632 AC010542.4-201ENST00000563151 1910 ntBASIC20.86■□□□□ 0.93
CAPNS1P04632 ALDH1A3-203ENST00000557963 1670 ntBASIC20.86■□□□□ 0.93
CAPNS1P04632 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPNS1P04632 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.86■□□□□ 0.93
CAPNS1P04632 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CAPNS1P04632 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CAPNS1P04632 FP325331.1-202ENST00000623531 1380 ntBASIC20.85■□□□□ 0.93
CAPNS1P04632 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPNS1P04632 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPNS1P04632 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.85■□□□□ 0.93
CAPNS1P04632 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
CAPNS1P04632 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPNS1P04632 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.85■□□□□ 0.93
CAPNS1P04632 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CAPNS1P04632 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.85■□□□□ 0.93
CAPNS1P04632 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CAPNS1P04632 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPNS1P04632 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPNS1P04632 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CAPNS1P04632 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.84■□□□□ 0.93
CAPNS1P04632 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPNS1P04632 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPNS1P04632 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.84■□□□□ 0.93
CAPNS1P04632 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPNS1P04632 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPNS1P04632 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.84■□□□□ 0.93
CAPNS1P04632 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.84■□□□□ 0.93
CAPNS1P04632 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CAPNS1P04632 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.84■□□□□ 0.93
CAPNS1P04632 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CAPNS1P04632 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPNS1P04632 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPNS1P04632 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CAPNS1P04632 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CAPNS1P04632 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
CAPNS1P04632 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CAPNS1P04632 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms