Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01549A6NIU2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01549A6NIU2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC01549A6NIU2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 AC129492.7-201ENST00000622992 756 ntBASIC14.89□□□□□ -0.03
LINC01549A6NIU2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC01549A6NIU2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms