Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CHCHD3Q9NX63 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHCHD3Q9NX63 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 BHLHE23-202ENST00000612929 1109 ntBASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 U85056.1-201ENST00000616429 682 ntBASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHCHD3Q9NX63 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 AC005082.1-201ENST00000413042 2259 ntBASIC19.48■□□□□ 0.71
CHCHD3Q9NX63 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CHCHD3Q9NX63 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHCHD3Q9NX63 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHCHD3Q9NX63 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 KRT18P60-201ENST00000312876 1297 ntBASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 DUX4L18-201ENST00000553347 1267 ntBASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 HCG11-201ENST00000411553 5696 ntBASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 Z98882.1-201ENST00000622160 2253 ntBASIC19.44■□□□□ 0.7
CHCHD3Q9NX63 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CHCHD3Q9NX63 AC020916.1-201ENST00000587762 1774 ntBASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms