Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MMAB-206ENST00000540016 945 ntTSL 3 BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 MMD2-204ENST00000612910 778 ntTSL 5 BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 NFE2L3P1-201ENST00000588207 1959 ntBASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
CDC42BPAQ5VT25 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 PBX1-209ENST00000485769 834 ntTSL 2 BASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 AC026366.1-201ENST00000488803 879 ntBASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
CDC42BPAQ5VT25 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC32.28■■■□□ 2.76
CDC42BPAQ5VT25 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC32.28■■■□□ 2.76
CDC42BPAQ5VT25 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC32.28■■■□□ 2.76
CDC42BPAQ5VT25 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CDC42BPAQ5VT25 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
CDC42BPAQ5VT25 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CDC42BPAQ5VT25 AC142381.4-202ENST00000563973 229 ntBASIC32.28■■■□□ 2.76
CDC42BPAQ5VT25 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC32.28■■■□□ 2.76
CDC42BPAQ5VT25 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC32.28■■■□□ 2.76
CDC42BPAQ5VT25 AC093323.1-202ENST00000635031 2045 ntBASIC32.27■■■□□ 2.76
CDC42BPAQ5VT25 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CDC42BPAQ5VT25 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CDC42BPAQ5VT25 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC32.27■■■□□ 2.76
CDC42BPAQ5VT25 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC32.27■■■□□ 2.76
CDC42BPAQ5VT25 AC060766.5-201ENST00000590539 871 ntBASIC32.27■■■□□ 2.76
CDC42BPAQ5VT25 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC32.27■■■□□ 2.76
CDC42BPAQ5VT25 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC32.27■■■□□ 2.76
CDC42BPAQ5VT25 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
CDC42BPAQ5VT25 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CDC42BPAQ5VT25 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC32.26■■■□□ 2.76
CDC42BPAQ5VT25 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC32.26■■■□□ 2.76
CDC42BPAQ5VT25 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CDC42BPAQ5VT25 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC32.26■■■□□ 2.75
CDC42BPAQ5VT25 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC32.26■■■□□ 2.75
CDC42BPAQ5VT25 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CDC42BPAQ5VT25 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
CDC42BPAQ5VT25 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CDC42BPAQ5VT25 LTK-203ENST00000453182 2412 ntTSL 2 BASIC32.26■■■□□ 2.75
CDC42BPAQ5VT25 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC32.25■■■□□ 2.75
CDC42BPAQ5VT25 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC32.25■■■□□ 2.75
CDC42BPAQ5VT25 GATS-209ENST00000454084 1030 ntTSL 3 BASIC32.25■■■□□ 2.75
CDC42BPAQ5VT25 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC32.25■■■□□ 2.75
CDC42BPAQ5VT25 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC32.25■■■□□ 2.75
CDC42BPAQ5VT25 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CDC42BPAQ5VT25 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CDC42BPAQ5VT25 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
CDC42BPAQ5VT25 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC32.24■■■□□ 2.75
CDC42BPAQ5VT25 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CDC42BPAQ5VT25 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC32.24■■■□□ 2.75
CDC42BPAQ5VT25 AC128676.1-201ENST00000454392 318 ntBASIC32.24■■■□□ 2.75
CDC42BPAQ5VT25 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
CDC42BPAQ5VT25 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
CDC42BPAQ5VT25 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 CYP2T3P-201ENST00000601990 817 ntBASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 FAM21FP-204ENST00000608637 956 ntBASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 AL158047.1-201ENST00000445918 881 ntBASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 USP36-216ENST00000589424 970 ntTSL 5 BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CDC42BPAQ5VT25 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CDC42BPAQ5VT25 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
CDC42BPAQ5VT25 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
CDC42BPAQ5VT25 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC32.22■■■□□ 2.75
CDC42BPAQ5VT25 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC32.22■■■□□ 2.75
CDC42BPAQ5VT25 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
CDC42BPAQ5VT25 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CDC42BPAQ5VT25 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC32.21■■■□□ 2.75
CDC42BPAQ5VT25 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CDC42BPAQ5VT25 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC32.21■■■□□ 2.75
CDC42BPAQ5VT25 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC32.21■■■□□ 2.75
CDC42BPAQ5VT25 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC32.21■■■□□ 2.75
CDC42BPAQ5VT25 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC32.21■■■□□ 2.75
CDC42BPAQ5VT25 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC32.21■■■□□ 2.75
CDC42BPAQ5VT25 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC32.2■■■□□ 2.75
CDC42BPAQ5VT25 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC32.2■■■□□ 2.75
CDC42BPAQ5VT25 UNC93B4-201ENST00000505679 747 ntBASIC32.2■■■□□ 2.75
CDC42BPAQ5VT25 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDC42BPAQ5VT25 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDC42BPAQ5VT25 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CDC42BPAQ5VT25 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC32.2■■■□□ 2.75
CDC42BPAQ5VT25 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC32.2■■■□□ 2.75
CDC42BPAQ5VT25 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CDC42BPAQ5VT25 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.74
CDC42BPAQ5VT25 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
CDC42BPAQ5VT25 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms