Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YPS7YDR349C 1791 nt4.1□□□□□ -1.75
SSL2Q00578 KRI1YNL308C 1776 nt4.1□□□□□ -1.75
SSL2Q00578 TSR1YDL060W 2367 nt4.1□□□□□ -1.75
SSL2Q00578 snR5snR5 204 nt4.1□□□□□ -1.75
SSL2Q00578 snR9snR9 187 nt4.1□□□□□ -1.75
SSL2Q00578 VPS74YDR372C 1038 nt4.1□□□□□ -1.75
SSL2Q00578 BRR6YGL247W 594 nt4.1□□□□□ -1.75
SSL2Q00578 RPC37YKR025W 849 nt4.1□□□□□ -1.75
SSL2Q00578 ERP1YAR002C-A 660 nt4.1□□□□□ -1.75
SSL2Q00578 COQ9YLR201C 783 nt4.1□□□□□ -1.75
SSL2Q00578 DDP1YOR163W 567 nt4.1□□□□□ -1.75
SSL2Q00578 MCM16YPR046W 546 nt4.1□□□□□ -1.75
SSL2Q00578 SPN1YPR133C 1233 nt4.1□□□□□ -1.75
SSL2Q00578 snR24snR24 89 nt4.1□□□□□ -1.75
SSL2Q00578 UBX5YDR330W 1503 nt4.1□□□□□ -1.75
SSL2Q00578 MTL1YGR023W 1656 nt4.1□□□□□ -1.75
SSL2Q00578 GCD2YGR083C 1956 nt4.09□□□□□ -1.75
SSL2Q00578 YDL050CYDL050C 372 nt4.09□□□□□ -1.75
SSL2Q00578 YDR199WYDR199W 366 nt4.09□□□□□ -1.75
SSL2Q00578 NSA2YER126C 786 nt4.09□□□□□ -1.75
SSL2Q00578 AGA2YGL032C 264 nt4.09□□□□□ -1.75
SSL2Q00578 RPL17AYKL180W 555 nt4.09□□□□□ -1.75
SSL2Q00578 IRC19YLL033W 693 nt4.09□□□□□ -1.75
SSL2Q00578 YOL159C-AYOL159C-A 273 nt4.09□□□□□ -1.75
SSL2Q00578 FYV12YOR183W 390 nt4.09□□□□□ -1.75
SSL2Q00578 LEE1YPL054W 906 nt4.09□□□□□ -1.75
SSL2Q00578 YPR059CYPR059C 387 nt4.09□□□□□ -1.75
SSL2Q00578 AVT2YEL064C 1443 nt4.09□□□□□ -1.75
SSL2Q00578 ALA1YOR335C 2877 nt4.09□□□□□ -1.75
SSL2Q00578 PGS1YCL004W 1566 nt4.09□□□□□ -1.75
SSL2Q00578 MNT4YNR059W 1743 nt4.09□□□□□ -1.76
SSL2Q00578 MSW1YDR268W 1140 nt4.08□□□□□ -1.76
SSL2Q00578 GLC7YER133W 939 nt4.08□□□□□ -1.76
SSL2Q00578 SEC6YIL068C 2418 nt4.08□□□□□ -1.76
SSL2Q00578 RRN7YJL025W 1545 nt4.08□□□□□ -1.76
SSL2Q00578 NTA1YJR062C 1374 nt4.08□□□□□ -1.76
SSL2Q00578 LTV1YKL143W 1392 nt4.08□□□□□ -1.76
SSL2Q00578 IES3YLR052W 753 nt4.08□□□□□ -1.76
SSL2Q00578 RIM11YMR139W 1113 nt4.08□□□□□ -1.76
SSL2Q00578 YNL058CYNL058C 951 nt4.08□□□□□ -1.76
SSL2Q00578 PHR1YOR386W 1698 nt4.08□□□□□ -1.76
SSL2Q00578 PIN3YPR154W 648 nt4.08□□□□□ -1.76
SSL2Q00578 KAR4YCL055W 1008 nt4.08□□□□□ -1.76
SSL2Q00578 CST9YLR394W 1449 nt4.07□□□□□ -1.76
SSL2Q00578 KRE2YDR483W 1329 nt4.07□□□□□ -1.76
SSL2Q00578 YLR400WYLR400W 474 nt4.07□□□□□ -1.76
SSL2Q00578 YBL010CYBL010C 843 nt4.07□□□□□ -1.76
SSL2Q00578 MSN1YOL116W 1149 nt4.07□□□□□ -1.76
SSL2Q00578 CAF20YOR276W 486 nt4.07□□□□□ -1.76
SSL2Q00578 RPS11BYBR048W 471 nt4.07□□□□□ -1.76
SSL2Q00578 YBR103C-AYBR103C-A 144 nt4.07□□□□□ -1.76
SSL2Q00578 CUE3YGL110C 1875 nt4.07□□□□□ -1.76
SSL2Q00578 MRH4YGL064C 1686 nt4.06□□□□□ -1.76
SSL2Q00578 RDS1YCR106W 2499 nt4.06□□□□□ -1.76
SSL2Q00578 SDS23YGL056C 1584 nt4.06□□□□□ -1.76
SSL2Q00578 UBP12YJL197W 3765 nt4.06□□□□□ -1.76
SSL2Q00578 NOP12YOL041C 1380 nt4.06□□□□□ -1.76
SSL2Q00578 RRN6YBL014C 2685 nt4.06□□□□□ -1.76
SSL2Q00578 ESA1YOR244W 1338 nt4.06□□□□□ -1.76
SSL2Q00578 MRPL11YDL202W 750 nt4.06□□□□□ -1.76
SSL2Q00578 YDR526CYDR526C 471 nt4.06□□□□□ -1.76
SSL2Q00578 SLX9YGR081C 633 nt4.06□□□□□ -1.76
SSL2Q00578 YHR050W-AYHR050W-A 171 nt4.06□□□□□ -1.76
SSL2Q00578 YOL150CYOL150C 312 nt4.06□□□□□ -1.76
SSL2Q00578 YOR105WYOR105W 327 nt4.06□□□□□ -1.76
SSL2Q00578 RPS10AYOR293W 318 nt4.06□□□□□ -1.76
SSL2Q00578 CUR1YPR158W 759 nt4.06□□□□□ -1.76
SSL2Q00578 YPR170CYPR170C 336 nt4.06□□□□□ -1.76
SSL2Q00578 DER1YBR201W 636 nt4.06□□□□□ -1.76
SSL2Q00578 DAP2YHR028C 2457 nt4.06□□□□□ -1.76
SSL2Q00578 THR4YCR053W 1545 nt4.05□□□□□ -1.76
SSL2Q00578 MTR4YJL050W 3222 nt4.05□□□□□ -1.76
SSL2Q00578 YDR170W-AYDR170W-A 1323 nt4.05□□□□□ -1.76
SSL2Q00578 YMR046CYMR046C 1323 nt4.05□□□□□ -1.76
SSL2Q00578 YIL029CYIL029C 429 nt4.05□□□□□ -1.76
SSL2Q00578 YJR037WYJR037W 384 nt4.05□□□□□ -1.76
SSL2Q00578 OCA2YNL056W 594 nt4.05□□□□□ -1.76
SSL2Q00578 SWS2YNL081C 432 nt4.05□□□□□ -1.76
SSL2Q00578 TOM22YNL131W 459 nt4.05□□□□□ -1.76
SSL2Q00578 RHO5YNL180C 996 nt4.05□□□□□ -1.76
SSL2Q00578 YNL235CYNL235C 432 nt4.05□□□□□ -1.76
SSL2Q00578 YRO2YBR054W 1035 nt4.05□□□□□ -1.76
SSL2Q00578 YRM1YOR172W 2361 nt4.04□□□□□ -1.76
SSL2Q00578 YDL032WYDL032W 312 nt4.04□□□□□ -1.76
SSL2Q00578 MIG3YER028C 1185 nt4.04□□□□□ -1.76
SSL2Q00578 TAM41YGR046W 1158 nt4.04□□□□□ -1.76
SSL2Q00578 YGR161W-CYGR161W-C 279 nt4.04□□□□□ -1.76
SSL2Q00578 MPC3YGR243W 441 nt4.04□□□□□ -1.76
SSL2Q00578 YAR075WYAR075W 474 nt4.04□□□□□ -1.76
SSL2Q00578 IMP1YMR150C 573 nt4.04□□□□□ -1.76
SSL2Q00578 ATG3YNR007C 933 nt4.04□□□□□ -1.76
SSL2Q00578 ERG11YHR007C 1593 nt4.04□□□□□ -1.76
SSL2Q00578 RIM4YHL024W 2142 nt4.04□□□□□ -1.76
SSL2Q00578 YOR365CYOR365C 2112 nt4.04□□□□□ -1.76
SSL2Q00578 MSS4YDR208W 2340 nt4.04□□□□□ -1.76
SSL2Q00578 DSN1YIR010W 1731 nt4.04□□□□□ -1.76
SSL2Q00578 MSD1YPL104W 1977 nt4.03□□□□□ -1.76
SSL2Q00578 GPI10YGL142C 1851 nt4.03□□□□□ -1.76
SSL2Q00578 ULP1YPL020C 1866 nt4.03□□□□□ -1.76
SSL2Q00578 YCT1YLL055W 1596 nt4.03□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 56.9 ms