Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SFTPBP07988 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.23■□□□□ 0.51
SFTPBP07988 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.23■□□□□ 0.51
SFTPBP07988 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.23■□□□□ 0.51
SFTPBP07988 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.23■□□□□ 0.51
SFTPBP07988 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.23■□□□□ 0.51
SFTPBP07988 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.23■□□□□ 0.51
SFTPBP07988 AC233992.3-201ENST00000607491 485 ntBASIC18.23■□□□□ 0.51
SFTPBP07988 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SFTPBP07988 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.23■□□□□ 0.51
SFTPBP07988 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.23■□□□□ 0.51
SFTPBP07988 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SFTPBP07988 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
SFTPBP07988 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 AC005229.4-201ENST00000610085 2198 ntBASIC18.23■□□□□ 0.51
SFTPBP07988 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.22■□□□□ 0.51
SFTPBP07988 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.22■□□□□ 0.51
SFTPBP07988 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
SFTPBP07988 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SFTPBP07988 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
SFTPBP07988 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.22■□□□□ 0.51
SFTPBP07988 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SFTPBP07988 BX842568.3-201ENST00000418104 571 ntBASIC18.22■□□□□ 0.51
SFTPBP07988 SLC47A1P1-202ENST00000449666 945 ntBASIC18.22■□□□□ 0.51
SFTPBP07988 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.22■□□□□ 0.51
SFTPBP07988 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 AC138932.1-201ENST00000534164 6830 ntBASIC18.22■□□□□ 0.51
SFTPBP07988 Z98882.1-201ENST00000622160 2253 ntBASIC18.22■□□□□ 0.51
SFTPBP07988 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
SFTPBP07988 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
SFTPBP07988 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.22■□□□□ 0.51
SFTPBP07988 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SFTPBP07988 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.22■□□□□ 0.51
SFTPBP07988 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SFTPBP07988 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.21■□□□□ 0.51
SFTPBP07988 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SFTPBP07988 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SFTPBP07988 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SFTPBP07988 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SFTPBP07988 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SFTPBP07988 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.21■□□□□ 0.51
SFTPBP07988 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SFTPBP07988 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SFTPBP07988 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SFTPBP07988 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SFTPBP07988 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SFTPBP07988 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.21■□□□□ 0.5
SFTPBP07988 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.21■□□□□ 0.5
SFTPBP07988 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SFTPBP07988 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.2■□□□□ 0.5
SFTPBP07988 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SFTPBP07988 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.2■□□□□ 0.5
SFTPBP07988 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.2■□□□□ 0.5
SFTPBP07988 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SFTPBP07988 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SFTPBP07988 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.2■□□□□ 0.5
SFTPBP07988 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SFTPBP07988 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SFTPBP07988 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SFTPBP07988 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SFTPBP07988 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.2■□□□□ 0.5
SFTPBP07988 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.2■□□□□ 0.5
SFTPBP07988 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.2■□□□□ 0.5
SFTPBP07988 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.2■□□□□ 0.5
SFTPBP07988 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SFTPBP07988 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SFTPBP07988 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SFTPBP07988 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.19■□□□□ 0.5
SFTPBP07988 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.19■□□□□ 0.5
SFTPBP07988 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.19■□□□□ 0.5
SFTPBP07988 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SFTPBP07988 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SFTPBP07988 AC126544.1-201ENST00000580842 1059 ntBASIC18.19■□□□□ 0.5
SFTPBP07988 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SFTPBP07988 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SFTPBP07988 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.19■□□□□ 0.5
SFTPBP07988 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SFTPBP07988 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SFTPBP07988 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SFTPBP07988 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SFTPBP07988 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SFTPBP07988 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SFTPBP07988 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SFTPBP07988 AC073130.3-201ENST00000624389 2278 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms