Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D3FA6NER0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TBC1D3FA6NER0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.05■□□□□ 0.96
TBC1D3FA6NER0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TBC1D3FA6NER0 CD99P1-205ENST00000527459 561 ntBASIC21.05■□□□□ 0.96
TBC1D3FA6NER0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.05■□□□□ 0.96
TBC1D3FA6NER0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
TBC1D3FA6NER0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.05■□□□□ 0.96
TBC1D3FA6NER0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 AC069236.1-201ENST00000604339 616 ntBASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TBC1D3FA6NER0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 AC133041.1-202ENST00000642053 222 ntBASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.03■□□□□ 0.96
TBC1D3FA6NER0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 AC069152.1-201ENST00000438030 544 ntBASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 OR10C1-204ENST00000622521 1039 ntBASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 MKRN4P-201ENST00000444706 1521 ntBASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.02■□□□□ 0.96
TBC1D3FA6NER0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TBC1D3FA6NER0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
TBC1D3FA6NER0 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.02■□□□□ 0.95
TBC1D3FA6NER0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 KRT18P6-201ENST00000555540 1265 ntBASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 AC026471.6-201ENST00000622954 1905 ntBASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TBC1D3FA6NER0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3FA6NER0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3FA6NER0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3FA6NER0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3FA6NER0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3FA6NER0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3FA6NER0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3FA6NER0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3FA6NER0 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 RBM17P2-201ENST00000616397 1405 ntBASIC21■□□□□ 0.95
TBC1D3FA6NER0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TBC1D3FA6NER0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21■□□□□ 0.95
TBC1D3FA6NER0 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
TBC1D3FA6NER0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.99■□□□□ 0.95
TBC1D3FA6NER0 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TBC1D3FA6NER0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms