Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 SUN2-207ENST00000433561 444 ntTSL 416.49■□□□□ 0.231e-10■□□□□ 8.3
DDX3XO00571 SUN2-210ENST00000452294 621 ntTSL 416.08■□□□□ 0.161e-10■□□□□ 8.3
DDX3XO00571 SUN2-204ENST00000417332 545 ntTSL 415.54■□□□□ 0.081e-10■□□□□ 8.3
DDX3XO00571 RAB17-205ENST00000411462 663 ntTSL 215.47■□□□□ 0.071e-10■□□□□ 8.3
DDX3XO00571 SUN2-209ENST00000439339 546 ntTSL 415.33■□□□□ 0.041e-10■□□□□ 8.3
DDX3XO00571 RAB17-207ENST00000416106 587 ntTSL 314.87□□□□□ -0.031e-10■□□□□ 8.3
DDX3XO00571 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.11e-10■□□□□ 8.3
DDX3XO00571 SUN2-218ENST00000494273 746 ntTSL 313.43□□□□□ -0.261e-10■□□□□ 8.3
DDX3XO00571 POLR3E-210ENST00000564256 449 ntTSL 312.41□□□□□ -0.421e-10■□□□□ 8.3
DDX3XO00571 COX5B-204ENST00000494306 738 ntTSL 212.1□□□□□ -0.472e-35■□□□□ 8.3
DDX3XO00571 COX5B-203ENST00000491989 611 ntTSL 38.83□□□□□ -12e-35■□□□□ 8.3
DDX3XO00571 METTL9-204ENST00000562961 785 ntTSL 26.38□□□□□ -1.391e-10■□□□□ 8.3
DDX3XO00571 METTL9-208ENST00000568826 376 ntTSL 34.47□□□□□ -1.691e-10■□□□□ 8.3
DDX3XO00571 VPS29-209ENST00000551655 766 ntTSL 513.74□□□□□ -0.211e-16■□□□□ 8.3
DDX3XO00571 VPS29-208ENST00000550267 810 ntTSL 210.19□□□□□ -0.781e-16■□□□□ 8.3
DDX3XO00571 TMEM74B-203ENST00000481747 582 ntTSL 228.98■■■□□ 2.239e-8■□□□□ 8.2
DDX3XO00571 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.249e-8■□□□□ 8.2
DDX3XO00571 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.369e-8■□□□□ 8.2
DDX3XO00571 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC27.08■■□□□ 1.931e-15■□□□□ 8.2
DDX3XO00571 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC25.24■■□□□ 1.631e-15■□□□□ 8.2
DDX3XO00571 TANGO2-222ENST00000479679 894 ntTSL 225.2■■□□□ 1.621e-15■□□□□ 8.2
DDX3XO00571 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.54■■□□□ 1.521e-15■□□□□ 8.2
DDX3XO00571 TANGO2-215ENST00000450019 1689 ntTSL 524.25■■□□□ 1.471e-15■□□□□ 8.2
DDX3XO00571 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.471e-15■□□□□ 8.2
DDX3XO00571 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.71■■□□□ 1.391e-15■□□□□ 8.2
DDX3XO00571 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.95■■□□□ 1.261e-15■□□□□ 8.2
DDX3XO00571 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.86■■□□□ 1.251e-15■□□□□ 8.2
DDX3XO00571 TANGO2-208ENST00000430807 733 ntTSL 322.75■■□□□ 1.231e-15■□□□□ 8.2
DDX3XO00571 TANGO2-206ENST00000411907 568 ntTSL 422.5■■□□□ 1.191e-15■□□□□ 8.2
DDX3XO00571 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.97■■□□□ 1.111e-15■□□□□ 8.2
DDX3XO00571 TANGO2-211ENST00000434168 862 ntTSL 318.65■□□□□ 0.581e-15■□□□□ 8.2
DDX3XO00571 TANGO2-203ENST00000399807 2241 ntTSL 517.47■□□□□ 0.391e-15■□□□□ 8.2
DDX3XO00571 TANGO2-216ENST00000450664 570 ntTSL 416.77■□□□□ 0.281e-15■□□□□ 8.2
DDX3XO00571 TANGO2-218ENST00000462579 649 ntTSL 416.01■□□□□ 0.151e-15■□□□□ 8.2
DDX3XO00571 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.87■□□□□ 0.131e-15■□□□□ 8.2
DDX3XO00571 TANGO2-219ENST00000471707 745 ntTSL 515.74■□□□□ 0.111e-15■□□□□ 8.2
DDX3XO00571 TANGO2-213ENST00000444651 847 ntTSL 314.54□□□□□ -0.081e-15■□□□□ 8.2
DDX3XO00571 TANGO2-220ENST00000475446 557 ntTSL 414.3□□□□□ -0.121e-15■□□□□ 8.2
DDX3XO00571 TANGO2-223ENST00000484373 3109 ntTSL 414.03□□□□□ -0.161e-15■□□□□ 8.2
DDX3XO00571 TANGO2-224ENST00000485715 617 ntTSL 513.69□□□□□ -0.221e-15■□□□□ 8.2
DDX3XO00571 TANGO2-209ENST00000432198 585 ntTSL 412.2□□□□□ -0.461e-15■□□□□ 8.2
DDX3XO00571 HSP90AA1-204ENST00000554401 1710 ntTSL 1 (best)9.22□□□□□ -0.938e-59■□□□□ 8.2
DDX3XO00571 BACH1-205ENST00000447177 751 ntTSL 213.47□□□□□ -0.252e-14■□□□□ 8.2
DDX3XO00571 BACH1-204ENST00000435072 692 ntTSL 313.42□□□□□ -0.262e-14■□□□□ 8.2
DDX3XO00571 LINC00958-201ENST00000504230 1558 ntTSL 2 BASIC11.52□□□□□ -0.572e-14■□□□□ 8.2
DDX3XO00571 LINC00958-203ENST00000527945 1121 ntTSL 2 BASIC9.59□□□□□ -0.872e-14■□□□□ 8.2
DDX3XO00571 BACH1-206ENST00000451655 777 ntTSL 38.86□□□□□ -0.992e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.72□□□□□ -1.012e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-210ENST00000529826 2423 ntTSL 58.66□□□□□ -1.022e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-208ENST00000528229 573 ntTSL 28.44□□□□□ -1.062e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-216ENST00000532384 3237 ntTSL 57.98□□□□□ -1.132e-14■□□□□ 8.2
DDX3XO00571 LINC00958-206ENST00000532541 1124 ntTSL 37.95□□□□□ -1.142e-14■□□□□ 8.2
DDX3XO00571 LINC00958-207ENST00000534477 888 ntTSL 37.95□□□□□ -1.142e-14■□□□□ 8.2
DDX3XO00571 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC7.86□□□□□ -1.152e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.78□□□□□ -1.482e-14■□□□□ 8.2
DDX3XO00571 LINC00958-205ENST00000531402 590 ntTSL 45.41□□□□□ -1.542e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.622e-14■□□□□ 8.2
DDX3XO00571 BACH1-212ENST00000548467 217 ntTSL 24.52□□□□□ -1.692e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-219ENST00000534269 4239 ntTSL 1 (best)4.46□□□□□ -1.72e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.72e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.762e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-212ENST00000530429 3167 ntTSL 53.79□□□□□ -1.82e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.43□□□□□ -1.862e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-206ENST00000527613 5640 ntTSL 1 (best)3.24□□□□□ -1.892e-14■□□□□ 8.2
DDX3XO00571 BCLAF1-224ENST00000640069 7719 ntTSL 51.6□□□□□ -2.152e-14■□□□□ 8.2
DDX3XO00571 FDPS-213ENST00000489003 976 ntTSL 215.85■□□□□ 0.131e-11■□□□□ 8.2
DDX3XO00571 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.041e-11■□□□□ 8.2
DDX3XO00571 FDPS-211ENST00000477057 741 ntTSL 213.1□□□□□ -0.311e-11■□□□□ 8.2
DDX3XO00571 CDHR3-213ENST00000488386 540 ntTSL 35.98□□□□□ -1.451e-11■□□□□ 8.2
DDX3XO00571 RPS4Y1-202ENST00000430575 811 ntTSL 35.59□□□□□ -1.511e-11■□□□□ 8.2
DDX3XO00571 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.561e-11■□□□□ 8.2
DDX3XO00571 FBLN1-211ENST00000451475 544 ntTSL 515.85■□□□□ 0.134e-23■□□□□ 8.2
DDX3XO00571 MLH1-208ENST00000442249 558 ntTSL 414.02□□□□□ -0.173e-13■□□□□ 8.2
DDX3XO00571 MLH1-214ENST00000457004 668 ntTSL 314.02□□□□□ -0.173e-13■□□□□ 8.2
DDX3XO00571 MLH1-211ENST00000454028 570 ntTSL 512.32□□□□□ -0.443e-13■□□□□ 8.2
DDX3XO00571 MLH1-205ENST00000432299 928 ntTSL 1 (best)11.01□□□□□ -0.653e-13■□□□□ 8.2
DDX3XO00571 MLH1-201ENST00000231790 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.73e-13■□□□□ 8.2
DDX3XO00571 MLH1-221ENST00000536378 2567 ntTSL 2 BASIC10.24□□□□□ -0.773e-13■□□□□ 8.2
DDX3XO00571 MLH1-213ENST00000456676 2230 ntTSL 1 (best)7.61□□□□□ -1.193e-13■□□□□ 8.2
DDX3XO00571 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.99■□□□□ 0.314e-46■□□□□ 8.2
DDX3XO00571 NEDD8-208ENST00000560427 654 ntTSL 213.53□□□□□ -0.241e-12■□□□□ 8.2
DDX3XO00571 NEDD8-205ENST00000527046 847 ntTSL 211.36□□□□□ -0.591e-12■□□□□ 8.2
DDX3XO00571 SMAD4-215ENST00000592911 475 ntTSL 58.38□□□□□ -1.071e-12■□□□□ 8.2
DDX3XO00571 DNAJC6-207ENST00000494710 1621 ntTSL 525.78■■□□□ 1.724e-12■□□□□ 8.2
DDX3XO00571 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.44e-12■□□□□ 8.2
DDX3XO00571 MCRS1-213ENST00000551625 2450 ntTSL 1 (best)17.03■□□□□ 0.324e-12■□□□□ 8.2
DDX3XO00571 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.254e-12■□□□□ 8.2
DDX3XO00571 MCRS1-206ENST00000548596 894 ntTSL 214.31□□□□□ -0.124e-12■□□□□ 8.2
DDX3XO00571 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.174e-12■□□□□ 8.2
DDX3XO00571 LENG8-205ENST00000439657 1073 ntTSL 513.8□□□□□ -0.24e-12■□□□□ 8.2
DDX3XO00571 MCRS1-210ENST00000549528 646 ntTSL 311.86□□□□□ -0.514e-12■□□□□ 8.2
DDX3XO00571 MCRS1-205ENST00000548334 876 ntTSL 311.36□□□□□ -0.594e-12■□□□□ 8.2
DDX3XO00571 LENG8-204ENST00000436479 320 ntTSL 510.39□□□□□ -0.754e-12■□□□□ 8.2
DDX3XO00571 DNAJC6-204ENST00000463018 546 ntTSL 36.04□□□□□ -1.444e-12■□□□□ 8.2
DDX3XO00571 SNRPG-208ENST00000482975 1093 ntTSL 1 (best) BASIC10.77□□□□□ -0.694e-11■□□□□ 8.2
DDX3XO00571 SNRPG-204ENST00000438261 515 ntTSL 2 BASIC9.47□□□□□ -0.894e-11■□□□□ 8.2
DDX3XO00571 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.71□□□□□ -1.824e-11■□□□□ 8.2
DDX3XO00571 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.71□□□□□ -1.824e-11■□□□□ 8.2
DDX3XO00571 SEC16A-203ENST00000313050 8806 ntAPPRIS P3 TSL 2 BASIC10.63□□□□□ -0.711e-13■□□□□ 8.2
DDX3XO00571 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)24.04■■□□□ 1.447e-32■□□□□ 8.2
Retrieved 100 of 47,714 protein–RNA pairs in 3425.3 ms