RNA–Protein interactions for RNA: ENST00000494306.1

COX5B-204, Transcript of cytochrome c oxidase subunit 5B, humanhuman

TSL 2

Gene COX5B, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX5B-204ENST00000494306 NISCHQ9Y2I1 1504 aa30.96■■■□□ 2.55
COX5B-204ENST00000494306 ABCC9O60706 1549 aa28.02■■■□□ 2.08
COX5B-204ENST00000494306 CCDC180Q9P1Z9 1646 aa27.79■■■□□ 2.04
COX5B-204ENST00000494306 RB1CC1Q8TDY2 1594 aa26.57■■□□□ 1.84
COX5B-204ENST00000494306 DNAJC5BQ9UF47 199 aa26.53■■□□□ 1.84
COX5B-204ENST00000494306 NACADO15069 1562 aa26.36■■□□□ 1.81
COX5B-204ENST00000494306 DCAF8L2P0C7V8 631 aa26.22■■□□□ 1.79
COX5B-204ENST00000494306 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.774e-8■□□□□ 9.7
COX5B-204ENST00000494306 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
COX5B-204ENST00000494306 UNC13AQ9UPW8 1703 aa25.94■■□□□ 1.74
COX5B-204ENST00000494306 BICRAQ9NZM4 1560 aa25.84■■□□□ 1.73
COX5B-204ENST00000494306 ZCCHC6Q5VYS8 1495 aaKnown RBP25.6■■□□□ 1.69
COX5B-204ENST00000494306 DCAF1Q9Y4B6 1507 aa25.57■■□□□ 1.68
COX5B-204ENST00000494306 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.66
COX5B-204ENST00000494306 CHIC1Q5VXU3 224 aa25.43■■□□□ 1.66
COX5B-204ENST00000494306 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
COX5B-204ENST00000494306 CC2D2AQ9P2K1 1620 aa25.29■■□□□ 1.64
COX5B-204ENST00000494306 CECR2Q9BXF3 1484 aa25.26■■□□□ 1.63
COX5B-204ENST00000494306 AEBP2Q6ZN18 517 aaPredicted RBP25.21■■□□□ 1.63
COX5B-204ENST00000494306 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
COX5B-204ENST00000494306 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
COX5B-204ENST00000494306 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
COX5B-204ENST00000494306 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
COX5B-204ENST00000494306 CUX2O14529 1486 aa24.21■■□□□ 1.47
COX5B-204ENST00000494306 ERCC6Q03468 1493 aa24.17■■□□□ 1.46
COX5B-204ENST00000494306 SMARCA4P51532 1647 aa24.16■■□□□ 1.46
COX5B-204ENST00000494306 SMARCA2P51531 1590 aa24.15■■□□□ 1.46
COX5B-204ENST00000494306 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
COX5B-204ENST00000494306 NESP48681 1621 aa24.04■■□□□ 1.44
COX5B-204ENST00000494306 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
COX5B-204ENST00000494306 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
COX5B-204ENST00000494306 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.42
COX5B-204ENST00000494306 MROH2BQ7Z745 1585 aa23.86■■□□□ 1.41
COX5B-204ENST00000494306 LAMC3Q9Y6N6 1575 aa23.8■■□□□ 1.4
COX5B-204ENST00000494306 THOC2Q8NI27 1593 aaKnown RBP23.78■■□□□ 1.4
COX5B-204ENST00000494306 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
COX5B-204ENST00000494306 KIF21AQ7Z4S6 1674 aa23.66■■□□□ 1.38
COX5B-204ENST00000494306 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
COX5B-204ENST00000494306 WIZO95785 1651 aa23.54■■□□□ 1.36
COX5B-204ENST00000494306 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
COX5B-204ENST00000494306 WDR62O43379 1518 aa23.43■■□□□ 1.34
COX5B-204ENST00000494306 CEP164Q9UPV0 1460 aa23.35■■□□□ 1.33
COX5B-204ENST00000494306 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
COX5B-204ENST00000494306 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
COX5B-204ENST00000494306 CFTRP13569 1480 aa23.31■■□□□ 1.32
COX5B-204ENST00000494306 TRIM41Q8WV44 630 aa23.27■■□□□ 1.32
COX5B-204ENST00000494306 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
COX5B-204ENST00000494306 URB2Q14146 1524 aaKnown RBP23.16■■□□□ 1.3
COX5B-204ENST00000494306 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
COX5B-204ENST00000494306 CCDC88BA6NC98 1476 aa23.01■■□□□ 1.27
COX5B-204ENST00000494306 PRDM2Q13029 1718 aa22.96■■□□□ 1.27
COX5B-204ENST00000494306 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
COX5B-204ENST00000494306 IFT140Q96RY7 1462 aa22.91■■□□□ 1.26
COX5B-204ENST00000494306 TOPBP1Q92547 1522 aa22.87■■□□□ 1.25
COX5B-204ENST00000494306 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
COX5B-204ENST00000494306 RIMBP3CA6NJZ7 1639 aa22.79■■□□□ 1.24
COX5B-204ENST00000494306 RIMBP3BA6NNM3 1639 aa22.79■■□□□ 1.24
COX5B-204ENST00000494306 RIMBP3Q9UFD9 1639 aa22.79■■□□□ 1.24
COX5B-204ENST00000494306 DNMBPQ6XZF7 1577 aa22.75■■□□□ 1.23
COX5B-204ENST00000494306 EIF4G3O43432 1585 aaKnown RBP22.72■■□□□ 1.23
COX5B-204ENST00000494306 ARHGEF11O15085 1522 aa22.71■■□□□ 1.23
COX5B-204ENST00000494306 AQRO60306 1485 aaKnown RBP eCLIP22.69■■□□□ 1.222e-10■□□□□ 10
COX5B-204ENST00000494306 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
COX5B-204ENST00000494306 POLA1P09884 1462 aaPredicted RBP22.63■■□□□ 1.21
COX5B-204ENST00000494306 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
COX5B-204ENST00000494306 CYB5RLQ6IPT4 315 aa22.59■■□□□ 1.21
COX5B-204ENST00000494306 RAD54L2Q9Y4B4 1467 aa22.57■■□□□ 1.2
COX5B-204ENST00000494306 CHD1O14646 1710 aa22.57■■□□□ 1.2
COX5B-204ENST00000494306 FBLN2P98095 1184 aa22.56■■□□□ 1.2
COX5B-204ENST00000494306 SOGA1O94964 1423 aa22.55■■□□□ 1.2
COX5B-204ENST00000494306 TDRD9Q8NDG6 1382 aaKnown RBP22.53■■□□□ 1.2
COX5B-204ENST00000494306 ARAP1Q96P48 1450 aa22.48■■□□□ 1.19
COX5B-204ENST00000494306 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
COX5B-204ENST00000494306 SNAPC4Q5SXM2 1469 aa22.42■■□□□ 1.18
COX5B-204ENST00000494306 CUX1P39880 1505 aa22.41■■□□□ 1.18
COX5B-204ENST00000494306 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
COX5B-204ENST00000494306 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
COX5B-204ENST00000494306 CHMP7Q8WUX9 453 aaPredicted RBP22.37■■□□□ 1.17
COX5B-204ENST00000494306 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
COX5B-204ENST00000494306 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
COX5B-204ENST00000494306 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
COX5B-204ENST00000494306 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
COX5B-204ENST00000494306 SYNJ2O15056 1496 aa22.29■■□□□ 1.16
COX5B-204ENST00000494306 GAPVD1Q14C86 1478 aa22.24■■□□□ 1.15
COX5B-204ENST00000494306 ABCA10Q8WWZ4 1543 aa22.2■■□□□ 1.14
COX5B-204ENST00000494306 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
COX5B-204ENST00000494306 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
COX5B-204ENST00000494306 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
COX5B-204ENST00000494306 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
COX5B-204ENST00000494306 GRIN2AQ12879 1464 aa22.05■■□□□ 1.12
COX5B-204ENST00000494306 ERCC6L2Q5T890 1561 aa22.01■■□□□ 1.11
COX5B-204ENST00000494306 NUP160Q12769 1436 aa22■■□□□ 1.11
COX5B-204ENST00000494306 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
COX5B-204ENST00000494306 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
COX5B-204ENST00000494306 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
COX5B-204ENST00000494306 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
COX5B-204ENST00000494306 FHAD1B1AJZ9 1412 aa21.97■■□□□ 1.11
COX5B-204ENST00000494306 ERICH3Q5RHP9 1530 aa21.9■■□□□ 1.1
COX5B-204ENST00000494306 SHROOM2Q13796 1616 aa21.9■■□□□ 1.1
COX5B-204ENST00000494306 JPH4Q96JJ6 628 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms