RNA–Protein interactions for RNA: ENST00000554401.1

HSP90AA1-204, Transcript of heat shock protein 90 alpha family class A member 1, humanhuman

TSL 1 (best)

Gene HSP90AA1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSP90AA1-204ENST00000554401 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
HSP90AA1-204ENST00000554401 CCDC180Q9P1Z9 1646 aa18.33■□□□□ 0.53
HSP90AA1-204ENST00000554401 ABCC9O60706 1549 aa17.89■□□□□ 0.45
HSP90AA1-204ENST00000554401 ZCCHC6Q5VYS8 1495 aaKnown RBP17.28■□□□□ 0.36
HSP90AA1-204ENST00000554401 DCAF8L2P0C7V8 631 aa17.24■□□□□ 0.35
HSP90AA1-204ENST00000554401 NACADO15069 1562 aa17.23■□□□□ 0.35
HSP90AA1-204ENST00000554401 RB1CC1Q8TDY2 1594 aa17.21■□□□□ 0.35
HSP90AA1-204ENST00000554401 MYO15BQ96JP2 1530 aa17.16■□□□□ 0.34
HSP90AA1-204ENST00000554401 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
HSP90AA1-204ENST00000554401 UNC13AQ9UPW8 1703 aa16.84■□□□□ 0.29
HSP90AA1-204ENST00000554401 SCRIBQ14160 1630 aa16.76■□□□□ 0.27
HSP90AA1-204ENST00000554401 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
HSP90AA1-204ENST00000554401 BICRAQ9NZM4 1560 aa16.74■□□□□ 0.27
HSP90AA1-204ENST00000554401 SHROOM4Q9ULL8 1493 aa16.52■□□□□ 0.23
HSP90AA1-204ENST00000554401 DNAJC5BQ9UF47 199 aa16.39■□□□□ 0.21
HSP90AA1-204ENST00000554401 EIF4G1Q04637 1599 aaKnown RBP16.27■□□□□ 0.19
HSP90AA1-204ENST00000554401 CC2D2AQ9P2K1 1620 aa16.17■□□□□ 0.18
HSP90AA1-204ENST00000554401 CECR2Q9BXF3 1484 aa16.15■□□□□ 0.18
HSP90AA1-204ENST00000554401 AEBP2Q6ZN18 517 aaPredicted RBP16.14■□□□□ 0.17
HSP90AA1-204ENST00000554401 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
HSP90AA1-204ENST00000554401 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.16
HSP90AA1-204ENST00000554401 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
HSP90AA1-204ENST00000554401 ATAD2BQ9ULI0 1458 aa15.94■□□□□ 0.14
HSP90AA1-204ENST00000554401 NCAPD3P42695 1498 aa15.92■□□□□ 0.14
HSP90AA1-204ENST00000554401 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
HSP90AA1-204ENST00000554401 PEG3Q9GZU2 1588 aa15.89■□□□□ 0.13
HSP90AA1-204ENST00000554401 HMGXB3Q12766 1538 aa15.83■□□□□ 0.12
HSP90AA1-204ENST00000554401 RSF1Q96T23 1441 aaPredicted RBP15.83■□□□□ 0.12
HSP90AA1-204ENST00000554401 BAZ1BQ9UIG0 1483 aaKnown RBP15.79■□□□□ 0.12
HSP90AA1-204ENST00000554401 WIZO95785 1651 aa15.79■□□□□ 0.12
HSP90AA1-204ENST00000554401 CHIC1Q5VXU3 224 aa15.79■□□□□ 0.12
HSP90AA1-204ENST00000554401 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
HSP90AA1-204ENST00000554401 NESP48681 1621 aa15.52■□□□□ 0.08
HSP90AA1-204ENST00000554401 SUPT5HO00267 1087 aaKnown RBP15.47■□□□□ 0.07
HSP90AA1-204ENST00000554401 CCDC88BA6NC98 1476 aa15.46■□□□□ 0.06
HSP90AA1-204ENST00000554401 CADPSQ9ULU8 1353 aa15.46■□□□□ 0.06
HSP90AA1-204ENST00000554401 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.06
HSP90AA1-204ENST00000554401 CFTRP13569 1480 aa15.38■□□□□ 0.05
HSP90AA1-204ENST00000554401 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
HSP90AA1-204ENST00000554401 PDS5BQ9NTI5 1447 aa15.35■□□□□ 0.05
HSP90AA1-204ENST00000554401 KIF21AQ7Z4S6 1674 aa15.3■□□□□ 0.04
HSP90AA1-204ENST00000554401 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
HSP90AA1-204ENST00000554401 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
HSP90AA1-204ENST00000554401 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
HSP90AA1-204ENST00000554401 PRDM2Q13029 1718 aa15.23■□□□□ 0.03
HSP90AA1-204ENST00000554401 MRC2Q9UBG0 1479 aa15.2■□□□□ 0.02
HSP90AA1-204ENST00000554401 CUX2O14529 1486 aa15.19■□□□□ 0.02
HSP90AA1-204ENST00000554401 WDR62O43379 1518 aa15.15■□□□□ 0.02
HSP90AA1-204ENST00000554401 URB2Q14146 1524 aaKnown RBP15.13■□□□□ 0.01
HSP90AA1-204ENST00000554401 TOPBP1Q92547 1522 aa15.04■□□□□ -0
HSP90AA1-204ENST00000554401 ABCC8Q09428 1581 aa15.02□□□□□ -0.01
HSP90AA1-204ENST00000554401 DNMBPQ6XZF7 1577 aa15.02□□□□□ -0.01
HSP90AA1-204ENST00000554401 CUX1P39880 1505 aa14.98□□□□□ -0.01
HSP90AA1-204ENST00000554401 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
HSP90AA1-204ENST00000554401 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
HSP90AA1-204ENST00000554401 FGD5Q6ZNL6 1462 aa14.91□□□□□ -0.02
HSP90AA1-204ENST00000554401 WRNQ14191 1432 aaPredicted RBP eCLIP14.9□□□□□ -0.02
HSP90AA1-204ENST00000554401 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
HSP90AA1-204ENST00000554401 SYNJ1O43426 1573 aa14.87□□□□□ -0.03
HSP90AA1-204ENST00000554401 ZNF608Q9ULD9 1512 aaPredicted RBP14.87□□□□□ -0.03
HSP90AA1-204ENST00000554401 RAD54L2Q9Y4B4 1467 aa14.87□□□□□ -0.03
HSP90AA1-204ENST00000554401 SOGA1O94964 1423 aa14.86□□□□□ -0.03
HSP90AA1-204ENST00000554401 TOP2BQ02880 1626 aa14.85□□□□□ -0.03
HSP90AA1-204ENST00000554401 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
HSP90AA1-204ENST00000554401 EIF4G3O43432 1585 aaKnown RBP14.79□□□□□ -0.04
HSP90AA1-204ENST00000554401 AQRO60306 1485 aaKnown RBP eCLIP14.78□□□□□ -0.041e-13■■■□□ 15.6
HSP90AA1-204ENST00000554401 TDRD9Q8NDG6 1382 aaKnown RBP14.78□□□□□ -0.04
HSP90AA1-204ENST00000554401 WDR97A6NE52 1622 aa14.76□□□□□ -0.05
HSP90AA1-204ENST00000554401 ABCA10Q8WWZ4 1543 aa14.75□□□□□ -0.05
HSP90AA1-204ENST00000554401 ABCA5Q8WWZ7 1642 aa14.69□□□□□ -0.06
HSP90AA1-204ENST00000554401 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
HSP90AA1-204ENST00000554401 GRIN2BQ13224 1484 aa14.67□□□□□ -0.06
HSP90AA1-204ENST00000554401 SNAPC4Q5SXM2 1469 aa14.65□□□□□ -0.06
HSP90AA1-204ENST00000554401 DNAJC5Q9H3Z4 198 aa14.65□□□□□ -0.06
HSP90AA1-204ENST00000554401 PBRM1Q86U86 1689 aa14.63□□□□□ -0.07
HSP90AA1-204ENST00000554401 MAGI1Q96QZ7 1491 aaPredicted RBP14.61□□□□□ -0.07
HSP90AA1-204ENST00000554401 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
HSP90AA1-204ENST00000554401 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
HSP90AA1-204ENST00000554401 CHD1O14646 1710 aa14.58□□□□□ -0.08
HSP90AA1-204ENST00000554401 ERICH3Q5RHP9 1530 aa14.57□□□□□ -0.08
HSP90AA1-204ENST00000554401 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
HSP90AA1-204ENST00000554401 FBLN2P98095 1184 aa14.56□□□□□ -0.08
HSP90AA1-204ENST00000554401 SYNJ2O15056 1496 aa14.56□□□□□ -0.08
HSP90AA1-204ENST00000554401 ADAMTS12P58397 1594 aa14.54□□□□□ -0.08
HSP90AA1-204ENST00000554401 CHMP7Q8WUX9 453 aaPredicted RBP14.54□□□□□ -0.08
HSP90AA1-204ENST00000554401 IGF1RP08069 1367 aa14.53□□□□□ -0.08
HSP90AA1-204ENST00000554401 FHAD1B1AJZ9 1412 aa14.52□□□□□ -0.08
HSP90AA1-204ENST00000554401 RUSC2Q8N2Y8 1516 aa14.52□□□□□ -0.09
HSP90AA1-204ENST00000554401 GRIN2AQ12879 1464 aa14.48□□□□□ -0.09
HSP90AA1-204ENST00000554401 CUL7Q14999 1698 aa14.44□□□□□ -0.1
HSP90AA1-204ENST00000554401 CLASP1Q7Z460 1538 aa14.44□□□□□ -0.1
HSP90AA1-204ENST00000554401 CARMIL1Q5VZK9 1371 aa14.43□□□□□ -0.1
HSP90AA1-204ENST00000554401 NUP160Q12769 1436 aa14.43□□□□□ -0.1
HSP90AA1-204ENST00000554401 CEP170Q5SW79 1584 aa14.42□□□□□ -0.1
HSP90AA1-204ENST00000554401 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
HSP90AA1-204ENST00000554401 RIMBP3CA6NJZ7 1639 aa14.35□□□□□ -0.11
HSP90AA1-204ENST00000554401 RIMBP3BA6NNM3 1639 aa14.35□□□□□ -0.11
HSP90AA1-204ENST00000554401 RIMBP3Q9UFD9 1639 aa14.35□□□□□ -0.11
HSP90AA1-204ENST00000554401 RAPGEF2Q9Y4G8 1499 aa14.34□□□□□ -0.11
HSP90AA1-204ENST00000554401 EEA1Q15075 1411 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms