RNA–Protein interactions for RNA: ENST00000532541.5

LINC00958-206, long intergenic non-protein coding RNA 958, humanhuman

TSL 3

Gene LINC00958, Length 1,124 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-206ENST00000532541 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
LINC00958-206ENST00000532541 ABCC9O60706 1549 aa17.99■□□□□ 0.47
LINC00958-206ENST00000532541 CCDC180Q9P1Z9 1646 aa17.83■□□□□ 0.44
LINC00958-206ENST00000532541 RB1CC1Q8TDY2 1594 aa17.02■□□□□ 0.32
LINC00958-206ENST00000532541 DCAF8L2P0C7V8 631 aa17.01■□□□□ 0.31
LINC00958-206ENST00000532541 NACADO15069 1562 aa16.85■□□□□ 0.29
LINC00958-206ENST00000532541 DNAJC5BQ9UF47 199 aa16.85■□□□□ 0.29
LINC00958-206ENST00000532541 PABPN1Q86U42 306 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00958-206ENST00000532541 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
LINC00958-206ENST00000532541 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
LINC00958-206ENST00000532541 BICRAQ9NZM4 1560 aa16.5■□□□□ 0.23
LINC00958-206ENST00000532541 ZCCHC6Q5VYS8 1495 aaKnown RBP16.45■□□□□ 0.22
LINC00958-206ENST00000532541 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
LINC00958-206ENST00000532541 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
LINC00958-206ENST00000532541 CC2D2AQ9P2K1 1620 aa16.19■□□□□ 0.18
LINC00958-206ENST00000532541 SHROOM4Q9ULL8 1493 aa16.19■□□□□ 0.18
LINC00958-206ENST00000532541 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
LINC00958-206ENST00000532541 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
LINC00958-206ENST00000532541 ERCC6Q03468 1493 aa15.55■□□□□ 0.08
LINC00958-206ENST00000532541 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
LINC00958-206ENST00000532541 SMARCA4P51532 1647 aa15.54■□□□□ 0.08
LINC00958-206ENST00000532541 ATAD2BQ9ULI0 1458 aa15.53■□□□□ 0.08
LINC00958-206ENST00000532541 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
LINC00958-206ENST00000532541 DNAJC5Q9H3Z4 198 aa15.46■□□□□ 0.07
LINC00958-206ENST00000532541 HMGXB3Q12766 1538 aa15.44■□□□□ 0.06
LINC00958-206ENST00000532541 BAZ1BQ9UIG0 1483 aaKnown RBP15.44■□□□□ 0.06
LINC00958-206ENST00000532541 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
LINC00958-206ENST00000532541 NESP48681 1621 aa15.43■□□□□ 0.06
LINC00958-206ENST00000532541 CUX2O14529 1486 aa15.41■□□□□ 0.06
LINC00958-206ENST00000532541 MROH2BQ7Z745 1585 aa15.36■□□□□ 0.05
LINC00958-206ENST00000532541 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
LINC00958-206ENST00000532541 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
LINC00958-206ENST00000532541 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
LINC00958-206ENST00000532541 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
LINC00958-206ENST00000532541 WIZO95785 1651 aa15.2■□□□□ 0.02
LINC00958-206ENST00000532541 PDS5BQ9NTI5 1447 aa15.17■□□□□ 0.02
LINC00958-206ENST00000532541 CADPSQ9ULU8 1353 aa15.11■□□□□ 0.01
LINC00958-206ENST00000532541 MRC2Q9UBG0 1479 aa15.06■□□□□ 0
LINC00958-206ENST00000532541 CEP164Q9UPV0 1460 aa15.01□□□□□ -0.01
LINC00958-206ENST00000532541 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
LINC00958-206ENST00000532541 WDR62O43379 1518 aa14.99□□□□□ -0.01
LINC00958-206ENST00000532541 FANCD2Q9BXW9 1451 aa14.98□□□□□ -0.01
LINC00958-206ENST00000532541 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.02
LINC00958-206ENST00000532541 TRIM41Q8WV44 630 aa14.95□□□□□ -0.02
LINC00958-206ENST00000532541 CFTRP13569 1480 aa14.91□□□□□ -0.02
LINC00958-206ENST00000532541 URB2Q14146 1524 aaKnown RBP14.85□□□□□ -0.03
LINC00958-206ENST00000532541 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
LINC00958-206ENST00000532541 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
LINC00958-206ENST00000532541 OSCARQ8IYS5 282 aa14.76□□□□□ -0.05
LINC00958-206ENST00000532541 ZNF608Q9ULD9 1512 aaPredicted RBP14.7□□□□□ -0.06
LINC00958-206ENST00000532541 TOPBP1Q92547 1522 aa14.68□□□□□ -0.06
LINC00958-206ENST00000532541 IFT140Q96RY7 1462 aa14.68□□□□□ -0.06
LINC00958-206ENST00000532541 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
LINC00958-206ENST00000532541 EIF4G3O43432 1585 aaKnown RBP14.61□□□□□ -0.07
LINC00958-206ENST00000532541 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
LINC00958-206ENST00000532541 FBLN2P98095 1184 aa14.59□□□□□ -0.07
LINC00958-206ENST00000532541 RIMBP3CA6NJZ7 1639 aa14.59□□□□□ -0.07
LINC00958-206ENST00000532541 RIMBP3BA6NNM3 1639 aa14.59□□□□□ -0.07
LINC00958-206ENST00000532541 RIMBP3Q9UFD9 1639 aa14.59□□□□□ -0.07
LINC00958-206ENST00000532541 AQRO60306 1485 aaKnown RBP eCLIP14.57□□□□□ -0.08
LINC00958-206ENST00000532541 CHD1O14646 1710 aa14.53□□□□□ -0.08
LINC00958-206ENST00000532541 POLA1P09884 1462 aaPredicted RBP14.53□□□□□ -0.08
LINC00958-206ENST00000532541 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.08
LINC00958-206ENST00000532541 RAD54L2Q9Y4B4 1467 aa14.52□□□□□ -0.08
LINC00958-206ENST00000532541 ARHGEF11O15085 1522 aa14.51□□□□□ -0.09
LINC00958-206ENST00000532541 TDRD9Q8NDG6 1382 aaKnown RBP14.49□□□□□ -0.09
LINC00958-206ENST00000532541 SUPT5HO00267 1087 aaKnown RBP14.49□□□□□ -0.09
LINC00958-206ENST00000532541 CYB5RLQ6IPT4 315 aa14.49□□□□□ -0.09
LINC00958-206ENST00000532541 SOGA1O94964 1423 aa14.49□□□□□ -0.09
LINC00958-206ENST00000532541 FGD5Q6ZNL6 1462 aa14.46□□□□□ -0.09
LINC00958-206ENST00000532541 SNAPC4Q5SXM2 1469 aa14.43□□□□□ -0.1
LINC00958-206ENST00000532541 CUX1P39880 1505 aa14.42□□□□□ -0.1
LINC00958-206ENST00000532541 TRHP20396 242 aaPredicted RBP14.4□□□□□ -0.1
LINC00958-206ENST00000532541 CHMP7Q8WUX9 453 aaPredicted RBP14.4□□□□□ -0.1
LINC00958-206ENST00000532541 ARAP1Q96P48 1450 aa14.38□□□□□ -0.11
LINC00958-206ENST00000532541 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
LINC00958-206ENST00000532541 SYNJ1O43426 1573 aa14.33□□□□□ -0.12
LINC00958-206ENST00000532541 MAGI1Q96QZ7 1491 aaPredicted RBP14.32□□□□□ -0.12
LINC00958-206ENST00000532541 WDR97A6NE52 1622 aa14.32□□□□□ -0.12
LINC00958-206ENST00000532541 PBRM1Q86U86 1689 aa14.32□□□□□ -0.12
LINC00958-206ENST00000532541 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
LINC00958-206ENST00000532541 SYNJ2O15056 1496 aa14.29□□□□□ -0.12
LINC00958-206ENST00000532541 CLASP1Q7Z460 1538 aa14.29□□□□□ -0.12
LINC00958-206ENST00000532541 ABCA10Q8WWZ4 1543 aa14.24□□□□□ -0.13
LINC00958-206ENST00000532541 ABCA5Q8WWZ7 1642 aa14.23□□□□□ -0.13
LINC00958-206ENST00000532541 WRNQ14191 1432 aaPredicted RBP eCLIP14.21□□□□□ -0.13
LINC00958-206ENST00000532541 GRIN2AQ12879 1464 aa14.17□□□□□ -0.14
LINC00958-206ENST00000532541 TOP2BQ02880 1626 aa14.16□□□□□ -0.14
LINC00958-206ENST00000532541 ADAMTS12P58397 1594 aa14.16□□□□□ -0.14
LINC00958-206ENST00000532541 BIVM-ERCC5R4GMW8 1640 aa14.15□□□□□ -0.14
LINC00958-206ENST00000532541 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
LINC00958-206ENST00000532541 CEP170Q5SW79 1584 aa14.13□□□□□ -0.15
LINC00958-206ENST00000532541 FHAD1B1AJZ9 1412 aa14.1□□□□□ -0.15
LINC00958-206ENST00000532541 NUP160Q12769 1436 aa14.07□□□□□ -0.16
LINC00958-206ENST00000532541 ERICH3Q5RHP9 1530 aa14.05□□□□□ -0.16
LINC00958-206ENST00000532541 SHROOM2Q13796 1616 aa14.01□□□□□ -0.17
LINC00958-206ENST00000532541 PRG4Q92954 1404 aaPredicted RBP14.01□□□□□ -0.17
LINC00958-206ENST00000532541 AEBP2Q6ZN18 517 aaPredicted RBP14□□□□□ -0.17
LINC00958-206ENST00000532541 JPH4Q96JJ6 628 aa13.99□□□□□ -0.17
LINC00958-206ENST00000532541 TTBK1Q5TCY1 1321 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms