RNA–Protein interactions for RNA: ENST00000551625.5

MCRS1-213, Transcript of microspherule protein 1, humanhuman

TSL 1 (best)

Gene MCRS1, Length 2,450 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCRS1-213ENST00000551625 PELP1Q8IZL8 1130 aaKnown RBP28.49■■■□□ 2.15
MCRS1-213ENST00000551625 NISCHQ9Y2I1 1504 aa28.18■■■□□ 2.1
MCRS1-213ENST00000551625 MYT1Q01538 1121 aa28■■■□□ 2.07
MCRS1-213ENST00000551625 HRCP23327 699 aa27.17■■□□□ 1.94
MCRS1-213ENST00000551625 TTBK1Q5TCY1 1321 aaPredicted RBP27.12■■□□□ 1.93
MCRS1-213ENST00000551625 SCAF1Q9H7N4 1312 aaKnown RBP26.26■■□□□ 1.79
MCRS1-213ENST00000551625 PPARGC1BQ86YN6 1023 aaKnown RBP26.1■■□□□ 1.77
MCRS1-213ENST00000551625 PRKCSHP14314 528 aaPredicted RBP25.99■■□□□ 1.75
MCRS1-213ENST00000551625 SLC24A1O60721 1099 aa25.85■■□□□ 1.73
MCRS1-213ENST00000551625 ERICH6Q7L0X2 663 aa25.79■■□□□ 1.72
MCRS1-213ENST00000551625 APLP2Q06481 763 aa25.7■■□□□ 1.7
MCRS1-213ENST00000551625 PCGF6Q9BYE7 350 aa25.63■■□□□ 1.69
MCRS1-213ENST00000551625 BCL11AQ9H165 835 aa25.44■■□□□ 1.66
MCRS1-213ENST00000551625 ABCC9O60706 1549 aa25.44■■□□□ 1.66
MCRS1-213ENST00000551625 CCDC180Q9P1Z9 1646 aa25.39■■□□□ 1.66
MCRS1-213ENST00000551625 ACIN1Q9UKV3 1341 aaKnown RBP25.35■■□□□ 1.65
MCRS1-213ENST00000551625 MYO15BQ96JP2 1530 aa25.23■■□□□ 1.63
MCRS1-213ENST00000551625 ZEB1P37275 1124 aaPredicted RBP25.23■■□□□ 1.63
MCRS1-213ENST00000551625 CENPBP07199 599 aaPredicted RBP25.22■■□□□ 1.63
MCRS1-213ENST00000551625 FAM9AQ8IZU1 332 aaPredicted RBP25.12■■□□□ 1.61
MCRS1-213ENST00000551625 DCAF1Q9Y4B6 1507 aa25.1■■□□□ 1.61
MCRS1-213ENST00000551625 NEUROD1Q13562 356 aa25.04■■□□□ 1.6
MCRS1-213ENST00000551625 GTF3C3Q9Y5Q9 886 aa25.03■■□□□ 1.6
MCRS1-213ENST00000551625 DAXXQ9UER7 740 aaPredicted RBP24.8■■□□□ 1.56
MCRS1-213ENST00000551625 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
MCRS1-213ENST00000551625 ANP32EQ9BTT0 268 aa24.68■■□□□ 1.54
MCRS1-213ENST00000551625 CHIC1Q5VXU3 224 aa24.44■■□□□ 1.5
MCRS1-213ENST00000551625 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
MCRS1-213ENST00000551625 RB1CC1Q8TDY2 1594 aa24.22■■□□□ 1.47
MCRS1-213ENST00000551625 DIEXFQ68CQ4 756 aaKnown RBP24.11■■□□□ 1.45
MCRS1-213ENST00000551625 EIF5BO60841 1220 aaKnown RBP24.08■■□□□ 1.45
MCRS1-213ENST00000551625 SUPT5HO00267 1087 aaKnown RBP24.04■■□□□ 1.44
MCRS1-213ENST00000551625 NACADO15069 1562 aa24.03■■□□□ 1.44
MCRS1-213ENST00000551625 CLSPNQ9HAW4 1339 aa24.02■■□□□ 1.44
MCRS1-213ENST00000551625 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
MCRS1-213ENST00000551625 TSHZ2Q9NRE2 1034 aa23.89■■□□□ 1.41
MCRS1-213ENST00000551625 DCAF8L2P0C7V8 631 aa23.75■■□□□ 1.39
MCRS1-213ENST00000551625 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
MCRS1-213ENST00000551625 LOC105371045A0A1W2PR82 267 aa23.72■■□□□ 1.39
MCRS1-213ENST00000551625 UNC13AQ9UPW8 1703 aa23.65■■□□□ 1.38
MCRS1-213ENST00000551625 PABPN1Q86U42 306 aaKnown RBP eCLIP23.64■■□□□ 1.37
MCRS1-213ENST00000551625 UBE2Q2Q8WVN8 375 aa23.64■■□□□ 1.37
MCRS1-213ENST00000551625 SUPT16HQ9Y5B9 1047 aaKnown RBP23.62■■□□□ 1.37
MCRS1-213ENST00000551625 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
MCRS1-213ENST00000551625 ANO8Q9HCE9 1232 aaPredicted RBP23.56■■□□□ 1.36
MCRS1-213ENST00000551625 MYT1LQ9UL68 1186 aa23.54■■□□□ 1.36
MCRS1-213ENST00000551625 YTHDC1Q96MU7 727 aaKnown RBP23.53■■□□□ 1.36
MCRS1-213ENST00000551625 BICRAQ9NZM4 1560 aa23.49■■□□□ 1.35
MCRS1-213ENST00000551625 ZNF316A6NFI3 1004 aaPredicted RBP23.42■■□□□ 1.34
MCRS1-213ENST00000551625 ERICH6BQ5W0A0 696 aa23.41■■□□□ 1.34
MCRS1-213ENST00000551625 CCER1Q8TC90 406 aaPredicted RBP23.38■■□□□ 1.33
MCRS1-213ENST00000551625 ZCCHC6Q5VYS8 1495 aaKnown RBP23.32■■□□□ 1.32
MCRS1-213ENST00000551625 MIER1Q8N108 512 aa23.29■■□□□ 1.32
MCRS1-213ENST00000551625 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.26■■□□□ 1.31
MCRS1-213ENST00000551625 PLEKHG5O94827 1062 aa23.26■■□□□ 1.31
MCRS1-213ENST00000551625 RBM19Q9Y4C8 960 aaKnown RBP23.18■■□□□ 1.3
MCRS1-213ENST00000551625 SALL2Q9Y467 1007 aaPredicted RBP23.17■■□□□ 1.3
MCRS1-213ENST00000551625 PODXL2Q9NZ53 605 aa23.1■■□□□ 1.29
MCRS1-213ENST00000551625 DEKP35659 375 aaKnown RBP23.08■■□□□ 1.29
MCRS1-213ENST00000551625 MSH5O43196 834 aa23.07■■□□□ 1.28
MCRS1-213ENST00000551625 SCRIBQ14160 1630 aa23.05■■□□□ 1.28
MCRS1-213ENST00000551625 FANCIQ9NVI1 1328 aa23.03■■□□□ 1.28
MCRS1-213ENST00000551625 CC2D2AQ9P2K1 1620 aa23■■□□□ 1.27
MCRS1-213ENST00000551625 PKNOX2Q96KN3 472 aa22.97■■□□□ 1.27
MCRS1-213ENST00000551625 CECR2Q9BXF3 1484 aa22.95■■□□□ 1.26
MCRS1-213ENST00000551625 NCBP3Q53F19 620 aaKnown RBP22.92■■□□□ 1.26
MCRS1-213ENST00000551625 EIF4G1Q04637 1599 aaKnown RBP22.92■■□□□ 1.26
MCRS1-213ENST00000551625 CCDC136Q96JN2 1154 aa22.9■■□□□ 1.26
MCRS1-213ENST00000551625 ARXQ96QS3 562 aa22.65■■□□□ 1.22
MCRS1-213ENST00000551625 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
MCRS1-213ENST00000551625 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.59■■□□□ 1.21
MCRS1-213ENST00000551625 FKBP8Q14318 412 aa22.59■■□□□ 1.21
MCRS1-213ENST00000551625 BCANQ96GW7 911 aa22.58■■□□□ 1.21
MCRS1-213ENST00000551625 NEFLP07196 543 aa22.54■■□□□ 1.2
MCRS1-213ENST00000551625 IL27Q8NEV9 243 aa22.5■■□□□ 1.19
MCRS1-213ENST00000551625 CDK11AQ9UQ88 783 aaPredicted RBP22.36■■□□□ 1.17
MCRS1-213ENST00000551625 WRNQ14191 1432 aaPredicted RBP eCLIP22.35■■□□□ 1.17
MCRS1-213ENST00000551625 C11orf95C9JLR9 678 aaPredicted RBP22.34■■□□□ 1.17
MCRS1-213ENST00000551625 GLIPR1L2Q4G1C9 344 aa22.34■■□□□ 1.17
MCRS1-213ENST00000551625 PDIA4P13667 645 aaKnown RBP22.33■■□□□ 1.16
MCRS1-213ENST00000551625 KLHL34Q8N239 644 aa22.32■■□□□ 1.16
MCRS1-213ENST00000551625 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
MCRS1-213ENST00000551625 RTN4Q9NQC3 1192 aaKnown RBP22.3■■□□□ 1.16
MCRS1-213ENST00000551625 ITGAEP38570 1179 aa22.28■■□□□ 1.16
MCRS1-213ENST00000551625 PDE4CQ08493 712 aa22.28■■□□□ 1.16
MCRS1-213ENST00000551625 RTL5Q5HYW3 569 aaPredicted RBP22.25■■□□□ 1.15
MCRS1-213ENST00000551625 NBR1Q14596 966 aa22.22■■□□□ 1.15
MCRS1-213ENST00000551625 RSPH6AQ9H0K4 717 aa22.21■■□□□ 1.15
MCRS1-213ENST00000551625 NCAPD3P42695 1498 aa22.17■■□□□ 1.14
MCRS1-213ENST00000551625 ZMYND15Q9H091 742 aa22.17■■□□□ 1.14
MCRS1-213ENST00000551625 WASHC2AQ641Q2 1341 aa22.16■■□□□ 1.14
MCRS1-213ENST00000551625 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
MCRS1-213ENST00000551625 WASHC2CQ9Y4E1 1318 aa22.12■■□□□ 1.13
MCRS1-213ENST00000551625 FGD1P98174 961 aa22.08■■□□□ 1.13
MCRS1-213ENST00000551625 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
MCRS1-213ENST00000551625 PAK3O75914 559 aaPredicted RBP22.05■■□□□ 1.12
MCRS1-213ENST00000551625 CUX2O14529 1486 aa22.05■■□□□ 1.12
MCRS1-213ENST00000551625 SMARCA2P51531 1590 aa22.02■■□□□ 1.12
MCRS1-213ENST00000551625 USP35Q9P2H5 1018 aa22.02■■□□□ 1.12
MCRS1-213ENST00000551625 SMARCA4P51532 1647 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms