RNA–Protein interactions for RNA: ENST00000526388.1

LINC00958-202, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 607 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-202ENST00000526388 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
LINC00958-202ENST00000526388 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
LINC00958-202ENST00000526388 NISCHQ9Y2I1 1504 aa19.61■□□□□ 0.73
LINC00958-202ENST00000526388 SENP3Q9H4L4 574 aaPredicted RBP18.75■□□□□ 0.59
LINC00958-202ENST00000526388 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
LINC00958-202ENST00000526388 CCDC180Q9P1Z9 1646 aa17.67■□□□□ 0.42
LINC00958-202ENST00000526388 ABCC9O60706 1549 aa17.49■□□□□ 0.39
LINC00958-202ENST00000526388 PLPPR3Q6T4P5 718 aa17.35■□□□□ 0.37
LINC00958-202ENST00000526388 FOXD1Q16676 465 aa17.34■□□□□ 0.37
LINC00958-202ENST00000526388 RB1CC1Q8TDY2 1594 aa16.72■□□□□ 0.27
LINC00958-202ENST00000526388 NACADO15069 1562 aa16.61■□□□□ 0.25
LINC00958-202ENST00000526388 ADRA2BP18089 450 aa16.57■□□□□ 0.24
LINC00958-202ENST00000526388 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
LINC00958-202ENST00000526388 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
LINC00958-202ENST00000526388 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
LINC00958-202ENST00000526388 MYO15BQ96JP2 1530 aa16.39■□□□□ 0.21
LINC00958-202ENST00000526388 PIAS4Q8N2W9 510 aaPredicted RBP16.37■□□□□ 0.21
LINC00958-202ENST00000526388 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
LINC00958-202ENST00000526388 BICRAQ9NZM4 1560 aa16.22■□□□□ 0.19
LINC00958-202ENST00000526388 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
LINC00958-202ENST00000526388 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
LINC00958-202ENST00000526388 DNAJC5BQ9UF47 199 aa16.21■□□□□ 0.19
LINC00958-202ENST00000526388 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
LINC00958-202ENST00000526388 MSH5O43196 834 aa16.13■□□□□ 0.17
LINC00958-202ENST00000526388 SCRIBQ14160 1630 aa16.08■□□□□ 0.17
LINC00958-202ENST00000526388 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
LINC00958-202ENST00000526388 CC2D2AQ9P2K1 1620 aa15.84■□□□□ 0.13
LINC00958-202ENST00000526388 EIF4G1Q04637 1599 aaKnown RBP15.83■□□□□ 0.12
LINC00958-202ENST00000526388 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
LINC00958-202ENST00000526388 SMARCA4P51532 1647 aa15.34■□□□□ 0.05
LINC00958-202ENST00000526388 SCAF1Q9H7N4 1312 aaKnown RBP15.28■□□□□ 0.04
LINC00958-202ENST00000526388 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
LINC00958-202ENST00000526388 NCAPD3P42695 1498 aa15.27■□□□□ 0.03
LINC00958-202ENST00000526388 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
LINC00958-202ENST00000526388 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
LINC00958-202ENST00000526388 BAZ1AQ9NRL2 1556 aaPredicted RBP15.24■□□□□ 0.03
LINC00958-202ENST00000526388 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
LINC00958-202ENST00000526388 PEG3Q9GZU2 1588 aa15.16■□□□□ 0.02
LINC00958-202ENST00000526388 BAZ1BQ9UIG0 1483 aaKnown RBP15.15■□□□□ 0.02
LINC00958-202ENST00000526388 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
LINC00958-202ENST00000526388 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
LINC00958-202ENST00000526388 CUX2O14529 1486 aa15.06■□□□□ 0
LINC00958-202ENST00000526388 MAPK8IP2Q13387 824 aaPredicted RBP15.05■□□□□ -0
LINC00958-202ENST00000526388 NESP48681 1621 aa15.04■□□□□ -0
LINC00958-202ENST00000526388 LAMC3Q9Y6N6 1575 aa14.99□□□□□ -0.01
LINC00958-202ENST00000526388 WIZO95785 1651 aa14.97□□□□□ -0.01
LINC00958-202ENST00000526388 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
LINC00958-202ENST00000526388 THOC2Q8NI27 1593 aaKnown RBP14.96□□□□□ -0.01
LINC00958-202ENST00000526388 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
LINC00958-202ENST00000526388 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
LINC00958-202ENST00000526388 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
LINC00958-202ENST00000526388 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
LINC00958-202ENST00000526388 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
LINC00958-202ENST00000526388 TOP2AP11388 1531 aaKnown RBP14.79□□□□□ -0.04
LINC00958-202ENST00000526388 CADPSQ9ULU8 1353 aa14.79□□□□□ -0.04
LINC00958-202ENST00000526388 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
LINC00958-202ENST00000526388 MRC2Q9UBG0 1479 aa14.76□□□□□ -0.05
LINC00958-202ENST00000526388 WDR62O43379 1518 aa14.74□□□□□ -0.05
LINC00958-202ENST00000526388 PRDM2Q13029 1718 aa14.72□□□□□ -0.05
LINC00958-202ENST00000526388 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
LINC00958-202ENST00000526388 KCNA4P22459 653 aa14.71□□□□□ -0.05
LINC00958-202ENST00000526388 CFTRP13569 1480 aa14.68□□□□□ -0.06
LINC00958-202ENST00000526388 FANCD2Q9BXW9 1451 aa14.68□□□□□ -0.06
LINC00958-202ENST00000526388 RNF216Q9NWF9 866 aaPredicted RBP14.61□□□□□ -0.07
LINC00958-202ENST00000526388 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
LINC00958-202ENST00000526388 URB2Q14146 1524 aaKnown RBP14.56□□□□□ -0.08
LINC00958-202ENST00000526388 HOXD11P31277 338 aaPredicted RBP14.55□□□□□ -0.08
LINC00958-202ENST00000526388 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
LINC00958-202ENST00000526388 TOPBP1Q92547 1522 aa14.42□□□□□ -0.1
LINC00958-202ENST00000526388 DNMBPQ6XZF7 1577 aa14.42□□□□□ -0.1
LINC00958-202ENST00000526388 IFT140Q96RY7 1462 aa14.39□□□□□ -0.11
LINC00958-202ENST00000526388 EIF4G3O43432 1585 aaKnown RBP14.38□□□□□ -0.11
LINC00958-202ENST00000526388 ABCC8Q09428 1581 aa14.38□□□□□ -0.11
LINC00958-202ENST00000526388 ZNF608Q9ULD9 1512 aaPredicted RBP14.36□□□□□ -0.11
LINC00958-202ENST00000526388 TARBP1Q13395 1621 aaKnown RBP14.33□□□□□ -0.12
LINC00958-202ENST00000526388 DCAF8L1A6NGE4 600 aa14.3□□□□□ -0.12
LINC00958-202ENST00000526388 CHD1O14646 1710 aa14.28□□□□□ -0.12
LINC00958-202ENST00000526388 POLA1P09884 1462 aaPredicted RBP14.28□□□□□ -0.12
LINC00958-202ENST00000526388 OSCARQ8IYS5 282 aa14.27□□□□□ -0.13
LINC00958-202ENST00000526388 TRIM41Q8WV44 630 aa14.27□□□□□ -0.13
LINC00958-202ENST00000526388 RIMBP3CA6NJZ7 1639 aa14.23□□□□□ -0.13
LINC00958-202ENST00000526388 RIMBP3BA6NNM3 1639 aa14.23□□□□□ -0.13
LINC00958-202ENST00000526388 RIMBP3Q9UFD9 1639 aa14.23□□□□□ -0.13
LINC00958-202ENST00000526388 CUX1P39880 1505 aa14.21□□□□□ -0.13
LINC00958-202ENST00000526388 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.13
LINC00958-202ENST00000526388 AQRO60306 1485 aaKnown RBP eCLIP14.2□□□□□ -0.14
LINC00958-202ENST00000526388 WDR97A6NE52 1622 aa14.2□□□□□ -0.14
LINC00958-202ENST00000526388 RAD54L2Q9Y4B4 1467 aa14.19□□□□□ -0.14
LINC00958-202ENST00000526388 ARHGEF11O15085 1522 aa14.16□□□□□ -0.14
LINC00958-202ENST00000526388 SOGA1O94964 1423 aa14.15□□□□□ -0.14
LINC00958-202ENST00000526388 PBRM1Q86U86 1689 aa14.14□□□□□ -0.15
LINC00958-202ENST00000526388 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
LINC00958-202ENST00000526388 SNAPC4Q5SXM2 1469 aa14.12□□□□□ -0.15
LINC00958-202ENST00000526388 TDRD9Q8NDG6 1382 aaKnown RBP14.11□□□□□ -0.15
LINC00958-202ENST00000526388 MAGI1Q96QZ7 1491 aaPredicted RBP14.09□□□□□ -0.15
LINC00958-202ENST00000526388 ABCA5Q8WWZ7 1642 aa14.08□□□□□ -0.16
LINC00958-202ENST00000526388 FBLN2P98095 1184 aa14.07□□□□□ -0.16
LINC00958-202ENST00000526388 GRIN2BQ13224 1484 aa14.06□□□□□ -0.16
LINC00958-202ENST00000526388 BIVM-ERCC5R4GMW8 1640 aa14.06□□□□□ -0.16
LINC00958-202ENST00000526388 CLASP1Q7Z460 1538 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms