Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 NDEL1-206ENST00000579880 551 ntTSL 217.52■□□□□ 0.44e-14■□□□□ 8.4
DDX3XO00571 KIDINS220-211ENST00000496725 562 ntTSL 417■□□□□ 0.312e-7■□□□□ 8.4
DDX3XO00571 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC14.08□□□□□ -0.164e-14■□□□□ 8.4
DDX3XO00571 TRAF4-214ENST00000580073 449 ntTSL 313.58□□□□□ -0.242e-7■□□□□ 8.4
DDX3XO00571 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.32e-7■□□□□ 8.4
DDX3XO00571 RPS10-203ENST00000464218 615 ntTSL 513.14□□□□□ -0.312e-7■□□□□ 8.4
DDX3XO00571 AC022384.1-201ENST00000437082 2270 ntAPPRIS P5 TSL 211.84□□□□□ -0.512e-7■□□□□ 8.4
DDX3XO00571 RPS10-204ENST00000467531 777 ntTSL 211.7□□□□□ -0.542e-7■□□□□ 8.4
DDX3XO00571 NDEL1-208ENST00000580237 577 ntTSL 411.18□□□□□ -0.624e-14■□□□□ 8.4
DDX3XO00571 NDEL1-214ENST00000582665 555 ntTSL 310.56□□□□□ -0.724e-14■□□□□ 8.4
DDX3XO00571 RPS10-202ENST00000344700 650 ntTSL 3 BASIC10.12□□□□□ -0.792e-7■□□□□ 8.4
DDX3XO00571 NDEL1-215ENST00000582812 588 ntTSL 49.16□□□□□ -0.944e-14■□□□□ 8.4
DDX3XO00571 KIDINS220-202ENST00000319688 3765 ntTSL 1 (best) BASIC8.75□□□□□ -1.012e-7■□□□□ 8.4
DDX3XO00571 KIDINS220-209ENST00000489024 4084 ntTSL 58.68□□□□□ -1.022e-7■□□□□ 8.4
DDX3XO00571 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.092e-7■□□□□ 8.4
DDX3XO00571 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC7.6□□□□□ -1.192e-7■□□□□ 8.4
DDX3XO00571 KIDINS220-208ENST00000488729 5988 ntTSL 1 (best)6.18□□□□□ -1.422e-7■□□□□ 8.4
DDX3XO00571 KIDINS220-212ENST00000569008 8735 ntTSL 56.07□□□□□ -1.442e-7■□□□□ 8.4
DDX3XO00571 NDEL1-213ENST00000582490 602 ntTSL 45.52□□□□□ -1.534e-14■□□□□ 8.4
DDX3XO00571 AES-211ENST00000592330 275 ntTSL 54.61□□□□□ -1.672e-7■□□□□ 8.4
DDX3XO00571 INSIG2-207ENST00000488995 518 ntTSL 34.43□□□□□ -1.72e-7■□□□□ 8.4
DDX3XO00571 CHFR-218ENST00000540963 875 ntTSL 226.42■■□□□ 1.821e-6■□□□□ 8.4
DDX3XO00571 CHFR-206ENST00000499045 505 ntTSL 226.1■■□□□ 1.771e-6■□□□□ 8.4
DDX3XO00571 EPB41L4A-AS1-202ENST00000427306 1367 ntTSL 224.82■■□□□ 1.568e-15■□□□□ 8.4
DDX3XO00571 VDAC1-204ENST00000425992 703 ntTSL 324.3■■□□□ 1.483e-10■□□□□ 8.4
DDX3XO00571 CHFR-215ENST00000537551 596 ntTSL 223.95■■□□□ 1.421e-6■□□□□ 8.4
DDX3XO00571 CCNL2-216ENST00000488340 1598 ntTSL 223.42■■□□□ 1.347e-8■□□□□ 8.4
DDX3XO00571 CHFR-209ENST00000535181 753 ntTSL 221.44■■□□□ 1.021e-6■□□□□ 8.4
DDX3XO00571 CHFR-212ENST00000536196 597 ntTSL 421.36■■□□□ 1.011e-6■□□□□ 8.4
DDX3XO00571 CHFR-217ENST00000540537 913 ntTSL 321.29■■□□□ 11e-6■□□□□ 8.4
DDX3XO00571 CCNL2-205ENST00000425598 661 ntTSL 521.22■□□□□ 0.997e-8■□□□□ 8.4
DDX3XO00571 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.897e-8■□□□□ 8.4
DDX3XO00571 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.42■□□□□ 0.865e-9■□□□□ 8.4
DDX3XO00571 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.29■□□□□ 0.841e-6■□□□□ 8.4
DDX3XO00571 ALDH9A1-202ENST00000461664 899 ntTSL 320.12■□□□□ 0.817e-8■□□□□ 8.4
DDX3XO00571 CCNL2-213ENST00000481223 2815 ntTSL 220.08■□□□□ 0.817e-8■□□□□ 8.4
DDX3XO00571 ALDH9A1-204ENST00000471457 568 ntTSL 220.02■□□□□ 0.87e-8■□□□□ 8.4
DDX3XO00571 JUP-204ENST00000420370 915 ntTSL 319.47■□□□□ 0.712e-19■□□□□ 8.4
DDX3XO00571 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.665e-9■□□□□ 8.4
DDX3XO00571 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.72■□□□□ 0.595e-9■□□□□ 8.4
DDX3XO00571 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.565e-9■□□□□ 8.4
DDX3XO00571 PDXK-218ENST00000498040 888 ntTSL 518.3■□□□□ 0.521e-13■□□□□ 8.4
DDX3XO00571 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.51e-6■□□□□ 8.4
DDX3XO00571 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.88■□□□□ 0.455e-9■□□□□ 8.4
DDX3XO00571 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.73■□□□□ 0.435e-9■□□□□ 8.4
DDX3XO00571 EPB41L4A-AS1-203ENST00000442823 578 ntTSL 217.47■□□□□ 0.398e-15■□□□□ 8.4
DDX3XO00571 FAM32A-203ENST00000587351 401 ntTSL 517.44■□□□□ 0.381e-6■□□□□ 8.4
DDX3XO00571 JUP-208ENST00000449889 1069 ntTSL 317.4■□□□□ 0.382e-19■□□□□ 8.4
DDX3XO00571 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.22■□□□□ 0.357e-8■□□□□ 8.4
DDX3XO00571 PDXK-204ENST00000398078 1069 ntTSL 217.21■□□□□ 0.351e-13■□□□□ 8.4
DDX3XO00571 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.08■□□□□ 0.328e-15■□□□□ 8.4
DDX3XO00571 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.07■□□□□ 0.321e-6■□□□□ 8.4
DDX3XO00571 DHX9-206ENST00000483416 814 ntTSL 516.81■□□□□ 0.287e-8■□□□□ 8.4
DDX3XO00571 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.245e-9■□□□□ 8.4
DDX3XO00571 RCHY1-203ENST00000504085 1123 ntTSL 1 (best)16.3■□□□□ 0.21e-6■□□□□ 8.4
DDX3XO00571 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.3■□□□□ 0.21e-6■□□□□ 8.4
DDX3XO00571 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.09■□□□□ 0.171e-6■□□□□ 8.4
DDX3XO00571 RCHY1-213ENST00000514589 2443 ntTSL 215.99■□□□□ 0.151e-6■□□□□ 8.4
DDX3XO00571 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.141e-6■□□□□ 8.4
DDX3XO00571 CHFR-214ENST00000536932 584 ntTSL 415.9■□□□□ 0.141e-6■□□□□ 8.4
DDX3XO00571 SUGP2-211ENST00000598240 3235 ntTSL 215.28■□□□□ 0.047e-8■□□□□ 8.4
DDX3XO00571 EPB41L4A-AS1-204ENST00000508590 292 ntTSL 315.27■□□□□ 0.048e-15■□□□□ 8.4
DDX3XO00571 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.21■□□□□ 0.031e-6■□□□□ 8.4
DDX3XO00571 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.15■□□□□ 0.021e-6■□□□□ 8.4
DDX3XO00571 WDR36-202ENST00000505303 2126 ntTSL 515.04■□□□□ -05e-16■□□□□ 8.4
DDX3XO00571 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.99□□□□□ -0.011e-6■□□□□ 8.4
DDX3XO00571 RAB3GAP2-201ENST00000237724 821 ntTSL 314.95□□□□□ -0.022e-11■□□□□ 8.4
DDX3XO00571 WBP2-216ENST00000591831 1406 ntTSL 514.94□□□□□ -0.025e-9■□□□□ 8.4
DDX3XO00571 VWDE-202ENST00000326715 1394 ntTSL 514.92□□□□□ -0.021e-6■□□□□ 8.4
DDX3XO00571 WBP2-208ENST00000588373 1374 ntTSL 214.83□□□□□ -0.045e-9■□□□□ 8.4
DDX3XO00571 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.7□□□□□ -0.065e-9■□□□□ 8.4
DDX3XO00571 CCNL2-218ENST00000496007 4452 ntTSL 214.66□□□□□ -0.067e-8■□□□□ 8.4
DDX3XO00571 HK1-205ENST00000436817 1042 ntTSL 514.65□□□□□ -0.063e-18■□□□□ 8.4
DDX3XO00571 PDXK-217ENST00000490666 577 ntTSL 514.52□□□□□ -0.091e-13■□□□□ 8.4
DDX3XO00571 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.097e-8■□□□□ 8.4
DDX3XO00571 WDYHV1-205ENST00000522194 341 ntTSL 214.44□□□□□ -0.11e-6■□□□□ 8.4
DDX3XO00571 PDXK-203ENST00000343528 1101 ntTSL 1 (best)14.29□□□□□ -0.121e-13■□□□□ 8.4
DDX3XO00571 CHFR-221ENST00000542714 542 ntTSL 414.23□□□□□ -0.131e-6■□□□□ 8.4
DDX3XO00571 TRNAU1AP-206ENST00000484775 1008 ntTSL 514.12□□□□□ -0.151e-6■□□□□ 8.4
DDX3XO00571 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC13.98□□□□□ -0.175e-9■□□□□ 8.4
DDX3XO00571 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.197e-8■□□□□ 8.4
DDX3XO00571 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.215e-16■□□□□ 8.4
DDX3XO00571 WBP2-214ENST00000590450 573 ntTSL 413.6□□□□□ -0.235e-9■□□□□ 8.4
DDX3XO00571 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC13.59□□□□□ -0.235e-9■□□□□ 8.4
DDX3XO00571 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.261e-6■□□□□ 8.4
DDX3XO00571 WBP2-202ENST00000416574 987 ntTSL 213.4□□□□□ -0.265e-9■□□□□ 8.4
DDX3XO00571 PRKAG1-204ENST00000547125 527 ntTSL 513.32□□□□□ -0.285e-9■□□□□ 8.4
DDX3XO00571 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.282e-19■□□□□ 8.4
DDX3XO00571 JUP-209ENST00000465293 432 ntTSL 513.22□□□□□ -0.292e-19■□□□□ 8.4
DDX3XO00571 VCL-205ENST00000478896 727 ntTSL 513.2□□□□□ -0.33e-26■□□□□ 8.4
DDX3XO00571 ADH5-210ENST00000512621 1475 ntTSL 213.07□□□□□ -0.321e-6■□□□□ 8.4
DDX3XO00571 DPM2-204ENST00000473360 744 ntTSL 513.01□□□□□ -0.332e-12■□□□□ 8.4
DDX3XO00571 PRKAG1-202ENST00000546531 1679 ntTSL 512.97□□□□□ -0.335e-9■□□□□ 8.4
DDX3XO00571 WBP2-212ENST00000589834 591 ntTSL 212.88□□□□□ -0.355e-9■□□□□ 8.4
DDX3XO00571 RCHY1-201ENST00000324439 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.411e-6■□□□□ 8.4
DDX3XO00571 MAPK9-205ENST00000397072 1416 ntTSL 1 (best) BASIC12.46□□□□□ -0.417e-8■□□□□ 8.4
DDX3XO00571 FAM32A-202ENST00000585831 896 ntTSL 212.44□□□□□ -0.421e-6■□□□□ 8.4
DDX3XO00571 CENPC-205ENST00000510189 2917 ntTSL 1 (best)12.41□□□□□ -0.427e-8■□□□□ 8.4
DDX3XO00571 WDR36-205ENST00000515784 562 ntTSL 212.31□□□□□ -0.445e-16■□□□□ 8.4
DDX3XO00571 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC12.2□□□□□ -0.461e-6■□□□□ 8.4
Retrieved 100 of 47,714 protein–RNA pairs in 4200.9 ms