RNA–Protein interactions for RNA: ENST00000582490.5

NDEL1-213, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-213ENST00000582490 AEBP2Q6ZN18 517 aaPredicted RBP19.36■□□□□ 0.69
NDEL1-213ENST00000582490 CHIC1Q5VXU3 224 aa18.36■□□□□ 0.53
NDEL1-213ENST00000582490 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
NDEL1-213ENST00000582490 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
NDEL1-213ENST00000582490 NISCHQ9Y2I1 1504 aa15.66■□□□□ 0.1
NDEL1-213ENST00000582490 FOXD1Q16676 465 aa15.41■□□□□ 0.06
NDEL1-213ENST00000582490 ABCC9O60706 1549 aa14.97□□□□□ -0.01
NDEL1-213ENST00000582490 DNAJC5BQ9UF47 199 aa14.76□□□□□ -0.05
NDEL1-213ENST00000582490 PLPPR3Q6T4P5 718 aa14.67□□□□□ -0.06
NDEL1-213ENST00000582490 MSH5O43196 834 aa14.47□□□□□ -0.09
NDEL1-213ENST00000582490 PIAS4Q8N2W9 510 aaPredicted RBP14.44□□□□□ -0.1
NDEL1-213ENST00000582490 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
NDEL1-213ENST00000582490 ADRA2BP18089 450 aa14.34□□□□□ -0.11
NDEL1-213ENST00000582490 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
NDEL1-213ENST00000582490 POTEDQ86YR6 584 aa14.18□□□□□ -0.14
NDEL1-213ENST00000582490 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
NDEL1-213ENST00000582490 RB1CC1Q8TDY2 1594 aa13.8□□□□□ -0.2
NDEL1-213ENST00000582490 DNAJC5Q9H3Z4 198 aa13.76□□□□□ -0.21
NDEL1-213ENST00000582490 UNC13AQ9UPW8 1703 aa13.73□□□□□ -0.21
NDEL1-213ENST00000582490 BICRAQ9NZM4 1560 aa13.62□□□□□ -0.23
NDEL1-213ENST00000582490 DCAF8L2P0C7V8 631 aa13.6□□□□□ -0.23
NDEL1-213ENST00000582490 NACADO15069 1562 aa13.55□□□□□ -0.24
NDEL1-213ENST00000582490 CECR2Q9BXF3 1484 aa13.47□□□□□ -0.25
NDEL1-213ENST00000582490 CC2D2AQ9P2K1 1620 aa13.45□□□□□ -0.26
NDEL1-213ENST00000582490 EIF4G1Q04637 1599 aaKnown RBP13.23□□□□□ -0.29
NDEL1-213ENST00000582490 MAPK8IP2Q13387 824 aaPredicted RBP13.17□□□□□ -0.3
NDEL1-213ENST00000582490 SCAF1Q9H7N4 1312 aaKnown RBP13.14□□□□□ -0.31
NDEL1-213ENST00000582490 DMRT2Q9Y5R5 561 aa13.11□□□□□ -0.31
NDEL1-213ENST00000582490 MYO15BQ96JP2 1530 aa13.09□□□□□ -0.31
NDEL1-213ENST00000582490 SCRIBQ14160 1630 aa13.07□□□□□ -0.32
NDEL1-213ENST00000582490 SHROOM4Q9ULL8 1493 aa13□□□□□ -0.33
NDEL1-213ENST00000582490 TRIM41Q8WV44 630 aa13□□□□□ -0.33
NDEL1-213ENST00000582490 CUX2O14529 1486 aa12.94□□□□□ -0.34
NDEL1-213ENST00000582490 PPP4R3CPQ6ZMV5 832 aa12.85□□□□□ -0.35
NDEL1-213ENST00000582490 ERCC6Q03468 1493 aa12.83□□□□□ -0.36
NDEL1-213ENST00000582490 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
NDEL1-213ENST00000582490 NESP48681 1621 aa12.77□□□□□ -0.37
NDEL1-213ENST00000582490 DCAF1Q9Y4B6 1507 aa12.76□□□□□ -0.37
NDEL1-213ENST00000582490 DCAF8L1A6NGE4 600 aa12.64□□□□□ -0.39
NDEL1-213ENST00000582490 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
NDEL1-213ENST00000582490 CNKSR2Q8WXI2 1034 aa12.62□□□□□ -0.39
NDEL1-213ENST00000582490 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
NDEL1-213ENST00000582490 NCAPD3P42695 1498 aa12.58□□□□□ -0.4
NDEL1-213ENST00000582490 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
NDEL1-213ENST00000582490 KIF21AQ7Z4S6 1674 aa12.52□□□□□ -0.4
NDEL1-213ENST00000582490 ATAD2BQ9ULI0 1458 aa12.52□□□□□ -0.41
NDEL1-213ENST00000582490 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
NDEL1-213ENST00000582490 CACNB1Q02641 598 aaPredicted RBP12.46□□□□□ -0.41
NDEL1-213ENST00000582490 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
NDEL1-213ENST00000582490 HMGXB3Q12766 1538 aa12.37□□□□□ -0.43
NDEL1-213ENST00000582490 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
NDEL1-213ENST00000582490 SMARCA4P51532 1647 aa12.35□□□□□ -0.43
NDEL1-213ENST00000582490 OSCARQ8IYS5 282 aa12.34□□□□□ -0.43
NDEL1-213ENST00000582490 LAMC3Q9Y6N6 1575 aa12.34□□□□□ -0.43
NDEL1-213ENST00000582490 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
NDEL1-213ENST00000582490 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
NDEL1-213ENST00000582490 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
NDEL1-213ENST00000582490 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
NDEL1-213ENST00000582490 BAZ1BQ9UIG0 1483 aaKnown RBP12.3□□□□□ -0.44
NDEL1-213ENST00000582490 PDS5BQ9NTI5 1447 aa12.27□□□□□ -0.45
NDEL1-213ENST00000582490 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
NDEL1-213ENST00000582490 WDR62O43379 1518 aa12.25□□□□□ -0.45
NDEL1-213ENST00000582490 TRHP20396 242 aaPredicted RBP12.2□□□□□ -0.46
NDEL1-213ENST00000582490 CYB5RLQ6IPT4 315 aa12.2□□□□□ -0.46
NDEL1-213ENST00000582490 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
NDEL1-213ENST00000582490 ARHGEF11O15085 1522 aa12.18□□□□□ -0.46
NDEL1-213ENST00000582490 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
NDEL1-213ENST00000582490 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
NDEL1-213ENST00000582490 NPM3O75607 178 aaKnown RBP12.15□□□□□ -0.46
NDEL1-213ENST00000582490 C1QBPQ07021 282 aaKnown RBP12.15□□□□□ -0.46
NDEL1-213ENST00000582490 URB2Q14146 1524 aaKnown RBP12.09□□□□□ -0.47
NDEL1-213ENST00000582490 CEP164Q9UPV0 1460 aa12.08□□□□□ -0.48
NDEL1-213ENST00000582490 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
NDEL1-213ENST00000582490 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
NDEL1-213ENST00000582490 FANCD2Q9BXW9 1451 aa12.07□□□□□ -0.48
NDEL1-213ENST00000582490 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.05□□□□□ -0.488e-10■■□□□ 12.4
NDEL1-213ENST00000582490 WIZO95785 1651 aa12.01□□□□□ -0.49
NDEL1-213ENST00000582490 CHD1O14646 1710 aa11.97□□□□□ -0.49
NDEL1-213ENST00000582490 ILDR1Q86SU0 546 aaPredicted RBP11.93□□□□□ -0.5
NDEL1-213ENST00000582490 CFTRP13569 1480 aa11.92□□□□□ -0.5
NDEL1-213ENST00000582490 KCNA4P22459 653 aa11.89□□□□□ -0.51
NDEL1-213ENST00000582490 FBLN2P98095 1184 aa11.87□□□□□ -0.51
NDEL1-213ENST00000582490 AQRO60306 1485 aaKnown RBP eCLIP11.87□□□□□ -0.516e-9■■■■□ 20
NDEL1-213ENST00000582490 EIF4G3O43432 1585 aaKnown RBP11.87□□□□□ -0.51
NDEL1-213ENST00000582490 IFT140Q96RY7 1462 aa11.83□□□□□ -0.52
NDEL1-213ENST00000582490 TOPBP1Q92547 1522 aa11.8□□□□□ -0.52
NDEL1-213ENST00000582490 RSF1Q96T23 1441 aaPredicted RBP11.78□□□□□ -0.52
NDEL1-213ENST00000582490 U3KPZ7 1027 aaPredicted RBP11.76□□□□□ -0.53
NDEL1-213ENST00000582490 TARBP1Q13395 1621 aaKnown RBP11.75□□□□□ -0.53
NDEL1-213ENST00000582490 PRDM2Q13029 1718 aa11.75□□□□□ -0.53
NDEL1-213ENST00000582490 CLASP1Q7Z460 1538 aa11.74□□□□□ -0.53
NDEL1-213ENST00000582490 RAD54L2Q9Y4B4 1467 aa11.71□□□□□ -0.53
NDEL1-213ENST00000582490 TDRD9Q8NDG6 1382 aaKnown RBP11.7□□□□□ -0.54
NDEL1-213ENST00000582490 KDM4FA0A1W2PPD8 638 aa11.7□□□□□ -0.54
NDEL1-213ENST00000582490 ERCC6L2Q5T890 1561 aa11.68□□□□□ -0.54
NDEL1-213ENST00000582490 TOP2AP11388 1531 aaKnown RBP11.66□□□□□ -0.54
NDEL1-213ENST00000582490 SNAPC4Q5SXM2 1469 aa11.66□□□□□ -0.54
NDEL1-213ENST00000582490 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.54
NDEL1-213ENST00000582490 GAPVD1Q14C86 1478 aa11.65□□□□□ -0.54
NDEL1-213ENST00000582490 POLA1P09884 1462 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms