RNA–Protein interactions for RNA: ENST00000510189.5

CENPC-205, Transcript of centromere protein C, humanhuman

TSL 1 (best)

Gene CENPC, Length 2,917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPC-205ENST00000510189 NISCHQ9Y2I1 1504 aa22.63■■□□□ 1.21
CENPC-205ENST00000510189 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
CENPC-205ENST00000510189 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
CENPC-205ENST00000510189 HRCP23327 699 aa19.4■□□□□ 0.7
CENPC-205ENST00000510189 SUPT5HO00267 1087 aaKnown RBP19.38■□□□□ 0.69
CENPC-205ENST00000510189 PPARGC1BQ86YN6 1023 aaKnown RBP19.2■□□□□ 0.66
CENPC-205ENST00000510189 PCGF6Q9BYE7 350 aa19.18■□□□□ 0.66
CENPC-205ENST00000510189 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
CENPC-205ENST00000510189 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
CENPC-205ENST00000510189 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
CENPC-205ENST00000510189 DCAF1Q9Y4B6 1507 aa18.69■□□□□ 0.58
CENPC-205ENST00000510189 LOC105371045A0A1W2PR82 267 aa18.62■□□□□ 0.57
CENPC-205ENST00000510189 DCAF8L2P0C7V8 631 aa18.54■□□□□ 0.56
CENPC-205ENST00000510189 PELP1Q8IZL8 1130 aaKnown RBP18.51■□□□□ 0.55
CENPC-205ENST00000510189 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
CENPC-205ENST00000510189 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
CENPC-205ENST00000510189 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
CENPC-205ENST00000510189 EHMT2Q96KQ7 1210 aa18.04■□□□□ 0.48
CENPC-205ENST00000510189 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
CENPC-205ENST00000510189 NACADO15069 1562 aa18.02■□□□□ 0.48
CENPC-205ENST00000510189 ABCC9O60706 1549 aa18■□□□□ 0.47
CENPC-205ENST00000510189 FAM9AQ8IZU1 332 aaPredicted RBP17.99■□□□□ 0.47
CENPC-205ENST00000510189 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
CENPC-205ENST00000510189 ACIN1Q9UKV3 1341 aaKnown RBP17.91■□□□□ 0.46
CENPC-205ENST00000510189 GTF3C3Q9Y5Q9 886 aa17.85■□□□□ 0.45
CENPC-205ENST00000510189 TRIM41Q8WV44 630 aa17.82■□□□□ 0.44
CENPC-205ENST00000510189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
CENPC-205ENST00000510189 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
CENPC-205ENST00000510189 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
CENPC-205ENST00000510189 CCER1Q8TC90 406 aaPredicted RBP17.72■□□□□ 0.43
CENPC-205ENST00000510189 MYT1Q01538 1121 aa17.7■□□□□ 0.42
CENPC-205ENST00000510189 DIEXFQ68CQ4 756 aaKnown RBP17.68■□□□□ 0.42
CENPC-205ENST00000510189 CENPBP07199 599 aaPredicted RBP17.67■□□□□ 0.42
CENPC-205ENST00000510189 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
CENPC-205ENST00000510189 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
CENPC-205ENST00000510189 YTHDC1Q96MU7 727 aaKnown RBP17.54■□□□□ 0.4
CENPC-205ENST00000510189 MROH2BQ7Z745 1585 aa17.52■□□□□ 0.4
CENPC-205ENST00000510189 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
CENPC-205ENST00000510189 WIZO95785 1651 aa17.43■□□□□ 0.38
CENPC-205ENST00000510189 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
CENPC-205ENST00000510189 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
CENPC-205ENST00000510189 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
CENPC-205ENST00000510189 MIER1Q8N108 512 aa17.27■□□□□ 0.35
CENPC-205ENST00000510189 BICRAQ9NZM4 1560 aa17.25■□□□□ 0.35
CENPC-205ENST00000510189 TOP2AP11388 1531 aaKnown RBP17.22■□□□□ 0.35
CENPC-205ENST00000510189 EIF4G1Q04637 1599 aaKnown RBP17.17■□□□□ 0.34
CENPC-205ENST00000510189 PABPN1Q86U42 306 aaKnown RBP eCLIP17.09■□□□□ 0.33
CENPC-205ENST00000510189 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
CENPC-205ENST00000510189 CCDC88BA6NC98 1476 aa17.07■□□□□ 0.32
CENPC-205ENST00000510189 HNRNPUL2Q1KMD3 747 aaKnown RBP17.06■□□□□ 0.32
CENPC-205ENST00000510189 PEG3Q9GZU2 1588 aa17.05■□□□□ 0.32
CENPC-205ENST00000510189 CEP162Q5TB80 1403 aa16.99■□□□□ 0.31
CENPC-205ENST00000510189 UBTFP17480 764 aaKnown RBP16.97■□□□□ 0.31
CENPC-205ENST00000510189 SUPT16HQ9Y5B9 1047 aaKnown RBP16.94■□□□□ 0.3
CENPC-205ENST00000510189 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
CENPC-205ENST00000510189 ABCC8Q09428 1581 aa16.89■□□□□ 0.29
CENPC-205ENST00000510189 ATAD2BQ9ULI0 1458 aa16.88■□□□□ 0.29
CENPC-205ENST00000510189 TSHZ2Q9NRE2 1034 aa16.86■□□□□ 0.29
CENPC-205ENST00000510189 SOGA1O94964 1423 aa16.85■□□□□ 0.29
CENPC-205ENST00000510189 ANP32EQ9BTT0 268 aa16.83■□□□□ 0.29
CENPC-205ENST00000510189 BCL11AQ9H165 835 aa16.81■□□□□ 0.28
CENPC-205ENST00000510189 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
CENPC-205ENST00000510189 BAZ1BQ9UIG0 1483 aaKnown RBP16.81■□□□□ 0.28
CENPC-205ENST00000510189 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
CENPC-205ENST00000510189 RUSC2Q8N2Y8 1516 aa16.76■□□□□ 0.27
CENPC-205ENST00000510189 RANGAP1P46060 587 aaPredicted RBP16.76■□□□□ 0.27
CENPC-205ENST00000510189 BCANQ96GW7 911 aa16.76■□□□□ 0.27
CENPC-205ENST00000510189 EEA1Q15075 1411 aa16.69■□□□□ 0.26
CENPC-205ENST00000510189 KCNH8Q96L42 1107 aa16.67■□□□□ 0.26
CENPC-205ENST00000510189 CLSPNQ9HAW4 1339 aa16.66■□□□□ 0.26
CENPC-205ENST00000510189 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
CENPC-205ENST00000510189 APLP2Q06481 763 aa16.65■□□□□ 0.26
CENPC-205ENST00000510189 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
CENPC-205ENST00000510189 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
CENPC-205ENST00000510189 GOLGA3Q08378 1498 aa16.59■□□□□ 0.25
CENPC-205ENST00000510189 FKBP8Q14318 412 aa16.57■□□□□ 0.24
CENPC-205ENST00000510189 CLIP1P30622 1438 aa16.54■□□□□ 0.24
CENPC-205ENST00000510189 DHX57Q6P158 1386 aaKnown RBP16.52■□□□□ 0.23
CENPC-205ENST00000510189 TOP2BQ02880 1626 aa16.5■□□□□ 0.23
CENPC-205ENST00000510189 ITGAEP38570 1179 aa16.49■□□□□ 0.23
CENPC-205ENST00000510189 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
CENPC-205ENST00000510189 RBM19Q9Y4C8 960 aaKnown RBP16.48■□□□□ 0.23
CENPC-205ENST00000510189 KIF21BO75037 1637 aa16.47■□□□□ 0.23
CENPC-205ENST00000510189 VPS8Q8N3P4 1428 aa16.46■□□□□ 0.23
CENPC-205ENST00000510189 CEP164Q9UPV0 1460 aa16.44■□□□□ 0.22
CENPC-205ENST00000510189 CFTRP13569 1480 aa16.42■□□□□ 0.22
CENPC-205ENST00000510189 DDX10Q13206 875 aaKnown RBP16.39■□□□□ 0.21
CENPC-205ENST00000510189 PRDM2Q13029 1718 aa16.39■□□□□ 0.21
CENPC-205ENST00000510189 KANK4Q5T7N3 995 aaPredicted RBP16.38■□□□□ 0.21
CENPC-205ENST00000510189 NEFLP07196 543 aa16.38■□□□□ 0.21
CENPC-205ENST00000510189 TRIM52Q96A61 297 aa16.38■□□□□ 0.21
CENPC-205ENST00000510189 CUX1P39880 1505 aa16.35■□□□□ 0.21
CENPC-205ENST00000510189 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
CENPC-205ENST00000510189 MSH5O43196 834 aa16.34■□□□□ 0.21
CENPC-205ENST00000510189 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.21
CENPC-205ENST00000510189 CC2D2AQ9P2K1 1620 aa16.31■□□□□ 0.2
CENPC-205ENST00000510189 ERICH3Q5RHP9 1530 aa16.26■□□□□ 0.19
CENPC-205ENST00000510189 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
CENPC-205ENST00000510189 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
CENPC-205ENST00000510189 IRX6P78412 446 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms