RNA–Protein interactions for RNA: ENST00000579880.5

NDEL1-206, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-206ENST00000579880 NISCHQ9Y2I1 1504 aa42.79■■■■■ 4.44
NDEL1-206ENST00000579880 CCDC180Q9P1Z9 1646 aa38.25■■■■□ 3.71
NDEL1-206ENST00000579880 ABCC9O60706 1549 aa37.96■■■■□ 3.67
NDEL1-206ENST00000579880 RB1CC1Q8TDY2 1594 aa36.27■■■■□ 3.4
NDEL1-206ENST00000579880 NACADO15069 1562 aa36.1■■■■□ 3.37
NDEL1-206ENST00000579880 DCAF8L2P0C7V8 631 aa35.99■■■■□ 3.35
NDEL1-206ENST00000579880 MYO15BQ96JP2 1530 aa35.72■■■■□ 3.31
NDEL1-206ENST00000579880 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
NDEL1-206ENST00000579880 PABPN1Q86U42 306 aaKnown RBP eCLIP35.39■■■■□ 3.26
NDEL1-206ENST00000579880 UNC13AQ9UPW8 1703 aa35.38■■■■□ 3.25
NDEL1-206ENST00000579880 DCAF1Q9Y4B6 1507 aa35.37■■■■□ 3.25
NDEL1-206ENST00000579880 DNAJC5BQ9UF47 199 aa35.28■■■■□ 3.24
NDEL1-206ENST00000579880 BICRAQ9NZM4 1560 aa35.17■■■■□ 3.22
NDEL1-206ENST00000579880 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
NDEL1-206ENST00000579880 SHROOM4Q9ULL8 1493 aa34.78■■■■□ 3.16
NDEL1-206ENST00000579880 EIF4G1Q04637 1599 aaKnown RBP34.31■■■■□ 3.08
NDEL1-206ENST00000579880 CC2D2AQ9P2K1 1620 aa34.29■■■■□ 3.08
NDEL1-206ENST00000579880 CECR2Q9BXF3 1484 aa34.16■■■■□ 3.06
NDEL1-206ENST00000579880 NCAPD3P42695 1498 aa33.32■■■□□ 2.92
NDEL1-206ENST00000579880 SMARCA4P51532 1647 aa33.31■■■□□ 2.92
NDEL1-206ENST00000579880 ATAD2BQ9ULI0 1458 aa33.27■■■□□ 2.92
NDEL1-206ENST00000579880 BAZ1AQ9NRL2 1556 aaPredicted RBP33.21■■■□□ 2.91
NDEL1-206ENST00000579880 SMARCA2P51531 1590 aa33.2■■■□□ 2.91
NDEL1-206ENST00000579880 HMGXB3Q12766 1538 aa33.11■■■□□ 2.89
NDEL1-206ENST00000579880 PEG3Q9GZU2 1588 aa32.98■■■□□ 2.87
NDEL1-206ENST00000579880 MROH2BQ7Z745 1585 aa32.97■■■□□ 2.87
NDEL1-206ENST00000579880 BAZ1BQ9UIG0 1483 aaKnown RBP32.97■■■□□ 2.87
NDEL1-206ENST00000579880 ERCC6Q03468 1493 aa32.76■■■□□ 2.84
NDEL1-206ENST00000579880 NESP48681 1621 aa32.68■■■□□ 2.82
NDEL1-206ENST00000579880 CUX2O14529 1486 aa32.59■■■□□ 2.81
NDEL1-206ENST00000579880 WIZO95785 1651 aa32.58■■■□□ 2.81
NDEL1-206ENST00000579880 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
NDEL1-206ENST00000579880 RSF1Q96T23 1441 aaPredicted RBP32.42■■■□□ 2.78
NDEL1-206ENST00000579880 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
NDEL1-206ENST00000579880 CADPSQ9ULU8 1353 aa32.33■■■□□ 2.77
NDEL1-206ENST00000579880 THOC2Q8NI27 1593 aaKnown RBP32.29■■■□□ 2.76
NDEL1-206ENST00000579880 KIF21AQ7Z4S6 1674 aa32.25■■■□□ 2.75
NDEL1-206ENST00000579880 TOP2AP11388 1531 aaKnown RBP32.21■■■□□ 2.75
NDEL1-206ENST00000579880 DNAJC5Q9H3Z4 198 aa32.19■■■□□ 2.74
NDEL1-206ENST00000579880 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
NDEL1-206ENST00000579880 CFTRP13569 1480 aa32.03■■■□□ 2.72
NDEL1-206ENST00000579880 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
NDEL1-206ENST00000579880 FANCD2Q9BXW9 1451 aa31.97■■■□□ 2.71
NDEL1-206ENST00000579880 WDR62O43379 1518 aa31.94■■■□□ 2.7
NDEL1-206ENST00000579880 CCDC88BA6NC98 1476 aa31.84■■■□□ 2.69
NDEL1-206ENST00000579880 PRDM2Q13029 1718 aa31.69■■■□□ 2.66
NDEL1-206ENST00000579880 URB2Q14146 1524 aaKnown RBP31.67■■■□□ 2.66
NDEL1-206ENST00000579880 TOPBP1Q92547 1522 aa31.39■■■□□ 2.62
NDEL1-206ENST00000579880 ABCC8Q09428 1581 aa31.36■■■□□ 2.61
NDEL1-206ENST00000579880 IFT140Q96RY7 1462 aa31.33■■■□□ 2.61
NDEL1-206ENST00000579880 DNMBPQ6XZF7 1577 aa31.3■■■□□ 2.6
NDEL1-206ENST00000579880 SUPT5HO00267 1087 aaKnown RBP31.23■■■□□ 2.59
NDEL1-206ENST00000579880 ZNF608Q9ULD9 1512 aaPredicted RBP31.23■■■□□ 2.59
NDEL1-206ENST00000579880 OSCARQ8IYS5 282 aa31.15■■■□□ 2.58
NDEL1-206ENST00000579880 POLA1P09884 1462 aaPredicted RBP31.09■■■□□ 2.57
NDEL1-206ENST00000579880 TARBP1Q13395 1621 aaKnown RBP31.07■■■□□ 2.56
NDEL1-206ENST00000579880 EIF4G3O43432 1585 aaKnown RBP31.07■■■□□ 2.56
NDEL1-206ENST00000579880 AQRO60306 1485 aaKnown RBP eCLIP30.98■■■□□ 2.556e-9■■■■□ 20
NDEL1-206ENST00000579880 CUX1P39880 1505 aa30.97■■■□□ 2.55
NDEL1-206ENST00000579880 SOGA1O94964 1423 aa30.97■■■□□ 2.55
NDEL1-206ENST00000579880 RAD54L2Q9Y4B4 1467 aa30.96■■■□□ 2.55
NDEL1-206ENST00000579880 FGD5Q6ZNL6 1462 aa30.95■■■□□ 2.55
NDEL1-206ENST00000579880 TRIM41Q8WV44 630 aa30.92■■■□□ 2.54
NDEL1-206ENST00000579880 TDRD9Q8NDG6 1382 aaKnown RBP30.85■■■□□ 2.53
NDEL1-206ENST00000579880 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
NDEL1-206ENST00000579880 CHD1O14646 1710 aa30.76■■■□□ 2.51
NDEL1-206ENST00000579880 FBLN2P98095 1184 aa30.73■■■□□ 2.51
NDEL1-206ENST00000579880 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.5
NDEL1-206ENST00000579880 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
NDEL1-206ENST00000579880 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
NDEL1-206ENST00000579880 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
NDEL1-206ENST00000579880 GRIN2BQ13224 1484 aa30.67■■■□□ 2.5
NDEL1-206ENST00000579880 ARHGEF11O15085 1522 aa30.64■■■□□ 2.5
NDEL1-206ENST00000579880 MAGI1Q96QZ7 1491 aaPredicted RBP30.63■■■□□ 2.49
NDEL1-206ENST00000579880 ABCA10Q8WWZ4 1543 aa30.61■■■□□ 2.49
NDEL1-206ENST00000579880 GAPVD1Q14C86 1478 aa30.59■■■□□ 2.49
NDEL1-206ENST00000579880 WRNQ14191 1432 aaPredicted RBP eCLIP30.59■■■□□ 2.49
NDEL1-206ENST00000579880 CHMP7Q8WUX9 453 aaPredicted RBP30.57■■■□□ 2.48
NDEL1-206ENST00000579880 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
NDEL1-206ENST00000579880 BIVM-ERCC5R4GMW8 1640 aa30.55■■■□□ 2.48
NDEL1-206ENST00000579880 PBRM1Q86U86 1689 aa30.53■■■□□ 2.48
NDEL1-206ENST00000579880 ABCA5Q8WWZ7 1642 aa30.53■■■□□ 2.48
NDEL1-206ENST00000579880 SYNJ1O43426 1573 aa30.53■■■□□ 2.48
NDEL1-206ENST00000579880 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
NDEL1-206ENST00000579880 CLASP1Q7Z460 1538 aa30.44■■■□□ 2.46
NDEL1-206ENST00000579880 CYB5RLQ6IPT4 315 aa30.4■■■□□ 2.46
NDEL1-206ENST00000579880 ARAP1Q96P48 1450 aa30.37■■■□□ 2.45
NDEL1-206ENST00000579880 ADAMTS12P58397 1594 aa30.28■■■□□ 2.44
NDEL1-206ENST00000579880 GRIN2AQ12879 1464 aa30.26■■■□□ 2.44
NDEL1-206ENST00000579880 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
NDEL1-206ENST00000579880 FHAD1B1AJZ9 1412 aa30.22■■■□□ 2.43
NDEL1-206ENST00000579880 NUP160Q12769 1436 aa30.15■■■□□ 2.42
NDEL1-206ENST00000579880 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
NDEL1-206ENST00000579880 KIF27Q86VH2 1401 aa29.99■■■□□ 2.39
NDEL1-206ENST00000579880 ERCC6L2Q5T890 1561 aa29.98■■■□□ 2.39
NDEL1-206ENST00000579880 TRHP20396 242 aaPredicted RBP29.97■■■□□ 2.39
NDEL1-206ENST00000579880 SHROOM2Q13796 1616 aa29.96■■■□□ 2.39
NDEL1-206ENST00000579880 IGF1RP08069 1367 aa29.92■■■□□ 2.38
NDEL1-206ENST00000579880 CUL7Q14999 1698 aa29.86■■■□□ 2.37
NDEL1-206ENST00000579880 JPH4Q96JJ6 628 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms