RNA–Protein interactions for RNA: ENST00000536932.5

CHFR-214, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 584 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-214ENST00000536932 NISCHQ9Y2I1 1504 aa38.06■■■■□ 3.68
CHFR-214ENST00000536932 ABCC9O60706 1549 aa34.9■■■■□ 3.18
CHFR-214ENST00000536932 CCDC180Q9P1Z9 1646 aa34.3■■■■□ 3.08
CHFR-214ENST00000536932 DNAJC5BQ9UF47 199 aa33.25■■■□□ 2.91
CHFR-214ENST00000536932 RB1CC1Q8TDY2 1594 aa32.93■■■□□ 2.86
CHFR-214ENST00000536932 NACADO15069 1562 aa32.59■■■□□ 2.81
CHFR-214ENST00000536932 PABPN1Q86U42 306 aaKnown RBP eCLIP32.45■■■□□ 2.79
CHFR-214ENST00000536932 DCAF8L2P0C7V8 631 aa32.39■■■□□ 2.78
CHFR-214ENST00000536932 UNC13AQ9UPW8 1703 aa32.12■■■□□ 2.73
CHFR-214ENST00000536932 BICRAQ9NZM4 1560 aa32.02■■■□□ 2.72
CHFR-214ENST00000536932 MYO15BQ96JP2 1530 aa31.98■■■□□ 2.71
CHFR-214ENST00000536932 SHROOM4Q9ULL8 1493 aa31.51■■■□□ 2.63
CHFR-214ENST00000536932 CECR2Q9BXF3 1484 aa31.48■■■□□ 2.63
CHFR-214ENST00000536932 CC2D2AQ9P2K1 1620 aa31.46■■■□□ 2.63
CHFR-214ENST00000536932 ZCCHC6Q5VYS8 1495 aaKnown RBP31.43■■■□□ 2.62
CHFR-214ENST00000536932 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.61
CHFR-214ENST00000536932 EIF4G1Q04637 1599 aaKnown RBP31.28■■■□□ 2.6
CHFR-214ENST00000536932 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
CHFR-214ENST00000536932 DNAJC5Q9H3Z4 198 aa30.88■■■□□ 2.53
CHFR-214ENST00000536932 CUX2O14529 1486 aa30.26■■■□□ 2.44
CHFR-214ENST00000536932 NCAPD3P42695 1498 aa30.14■■■□□ 2.42
CHFR-214ENST00000536932 ERCC6Q03468 1493 aa30.14■■■□□ 2.42
CHFR-214ENST00000536932 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
CHFR-214ENST00000536932 NESP48681 1621 aa29.84■■■□□ 2.37
CHFR-214ENST00000536932 HMGXB3Q12766 1538 aa29.83■■■□□ 2.37
CHFR-214ENST00000536932 SMARCA2P51531 1590 aa29.81■■■□□ 2.36
CHFR-214ENST00000536932 SMARCA4P51532 1647 aa29.77■■■□□ 2.36
CHFR-214ENST00000536932 BAZ1BQ9UIG0 1483 aaKnown RBP29.63■■■□□ 2.33
CHFR-214ENST00000536932 THOC2Q8NI27 1593 aaKnown RBP29.6■■■□□ 2.33
CHFR-214ENST00000536932 BAZ1AQ9NRL2 1556 aaPredicted RBP29.56■■■□□ 2.32
CHFR-214ENST00000536932 PEG3Q9GZU2 1588 aa29.49■■■□□ 2.31
CHFR-214ENST00000536932 LAMC3Q9Y6N6 1575 aa29.49■■■□□ 2.31
CHFR-214ENST00000536932 PDS5BQ9NTI5 1447 aa29.37■■■□□ 2.29
CHFR-214ENST00000536932 KIF21AQ7Z4S6 1674 aa29.35■■■□□ 2.29
CHFR-214ENST00000536932 MROH2BQ7Z745 1585 aa29.33■■■□□ 2.29
CHFR-214ENST00000536932 TRIM41Q8WV44 630 aa29.31■■■□□ 2.28
CHFR-214ENST00000536932 CADPSQ9ULU8 1353 aa29.21■■■□□ 2.27
CHFR-214ENST00000536932 MRC2Q9UBG0 1479 aa29.15■■■□□ 2.26
CHFR-214ENST00000536932 WDR62O43379 1518 aa29.09■■■□□ 2.25
CHFR-214ENST00000536932 CEP164Q9UPV0 1460 aa28.92■■■□□ 2.22
CHFR-214ENST00000536932 WIZO95785 1651 aa28.92■■■□□ 2.22
CHFR-214ENST00000536932 FANCD2Q9BXW9 1451 aa28.86■■■□□ 2.21
CHFR-214ENST00000536932 OSCARQ8IYS5 282 aa28.82■■■□□ 2.2
CHFR-214ENST00000536932 CFTRP13569 1480 aa28.76■■■□□ 2.19
CHFR-214ENST00000536932 URB2Q14146 1524 aaKnown RBP28.66■■■□□ 2.18
CHFR-214ENST00000536932 RSF1Q96T23 1441 aaPredicted RBP28.55■■■□□ 2.16
CHFR-214ENST00000536932 TOP2AP11388 1531 aaKnown RBP28.53■■■□□ 2.16
CHFR-214ENST00000536932 RIMBP3CA6NJZ7 1639 aa28.46■■■□□ 2.15
CHFR-214ENST00000536932 RIMBP3BA6NNM3 1639 aa28.46■■■□□ 2.15
CHFR-214ENST00000536932 RIMBP3Q9UFD9 1639 aa28.46■■■□□ 2.15
CHFR-214ENST00000536932 ZNF608Q9ULD9 1512 aaPredicted RBP28.41■■■□□ 2.14
CHFR-214ENST00000536932 IFT140Q96RY7 1462 aa28.37■■■□□ 2.13
CHFR-214ENST00000536932 ARHGEF11O15085 1522 aa28.35■■■□□ 2.13
CHFR-214ENST00000536932 PRDM2Q13029 1718 aa28.27■■■□□ 2.12
CHFR-214ENST00000536932 TOPBP1Q92547 1522 aa28.25■■■□□ 2.11
CHFR-214ENST00000536932 CCDC88BA6NC98 1476 aa28.24■■■□□ 2.11
CHFR-214ENST00000536932 CYB5RLQ6IPT4 315 aa28.2■■■□□ 2.1
CHFR-214ENST00000536932 EIF4G3O43432 1585 aaKnown RBP28.17■■■□□ 2.1
CHFR-214ENST00000536932 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
CHFR-214ENST00000536932 AQRO60306 1485 aaKnown RBP eCLIP28.09■■■□□ 2.09
CHFR-214ENST00000536932 DNMBPQ6XZF7 1577 aa28.07■■■□□ 2.08
CHFR-214ENST00000536932 ARAP1Q96P48 1450 aa28.05■■■□□ 2.08
CHFR-214ENST00000536932 TRHP20396 242 aaPredicted RBP28.04■■■□□ 2.08
CHFR-214ENST00000536932 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
CHFR-214ENST00000536932 CHD1O14646 1710 aa28.01■■■□□ 2.07
CHFR-214ENST00000536932 FBLN2P98095 1184 aa28■■■□□ 2.07
CHFR-214ENST00000536932 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
CHFR-214ENST00000536932 RAD54L2Q9Y4B4 1467 aa27.87■■■□□ 2.05
CHFR-214ENST00000536932 TDRD9Q8NDG6 1382 aaKnown RBP27.84■■■□□ 2.05
CHFR-214ENST00000536932 SOGA1O94964 1423 aa27.81■■■□□ 2.04
CHFR-214ENST00000536932 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.04
CHFR-214ENST00000536932 CLASP1Q7Z460 1538 aa27.75■■■□□ 2.03
CHFR-214ENST00000536932 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.02
CHFR-214ENST00000536932 FGD5Q6ZNL6 1462 aa27.69■■■□□ 2.02
CHFR-214ENST00000536932 WDR97A6NE52 1622 aa27.66■■■□□ 2.02
CHFR-214ENST00000536932 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
CHFR-214ENST00000536932 MAGI1Q96QZ7 1491 aaPredicted RBP27.64■■■□□ 2.02
CHFR-214ENST00000536932 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
CHFR-214ENST00000536932 CUX1P39880 1505 aa27.58■■■□□ 2.01
CHFR-214ENST00000536932 AEBP2Q6ZN18 517 aaPredicted RBP27.58■■■□□ 2.01
CHFR-214ENST00000536932 SYNJ2O15056 1496 aa27.57■■■□□ 2
CHFR-214ENST00000536932 GAPVD1Q14C86 1478 aa27.51■■□□□ 1.99
CHFR-214ENST00000536932 PBRM1Q86U86 1689 aa27.39■■□□□ 1.97
CHFR-214ENST00000536932 ABCA10Q8WWZ4 1543 aa27.34■■□□□ 1.97
CHFR-214ENST00000536932 ABCA5Q8WWZ7 1642 aa27.31■■□□□ 1.96
CHFR-214ENST00000536932 ERCC6L2Q5T890 1561 aa27.31■■□□□ 1.96
CHFR-214ENST00000536932 GRIN2AQ12879 1464 aa27.25■■□□□ 1.95
CHFR-214ENST00000536932 SUPT5HO00267 1087 aaKnown RBP27.2■■□□□ 1.94
CHFR-214ENST00000536932 NUP160Q12769 1436 aa27.2■■□□□ 1.94
CHFR-214ENST00000536932 CEP170Q5SW79 1584 aa27.2■■□□□ 1.94
CHFR-214ENST00000536932 ADAMTS12P58397 1594 aa27.16■■□□□ 1.94
CHFR-214ENST00000536932 WRNQ14191 1432 aaPredicted RBP eCLIP27.13■■□□□ 1.931e-6■■■■■ 52.5
CHFR-214ENST00000536932 SHROOM2Q13796 1616 aa27.09■■□□□ 1.93
CHFR-214ENST00000536932 FHAD1B1AJZ9 1412 aa27.08■■□□□ 1.93
CHFR-214ENST00000536932 PRG4Q92954 1404 aaPredicted RBP26.99■■□□□ 1.91
CHFR-214ENST00000536932 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
CHFR-214ENST00000536932 KIF13AQ9H1H9 1805 aa26.97■■□□□ 1.91
CHFR-214ENST00000536932 ERICH3Q5RHP9 1530 aa26.96■■□□□ 1.91
CHFR-214ENST00000536932 BIVM-ERCC5R4GMW8 1640 aa26.95■■□□□ 1.91
CHFR-214ENST00000536932 JPH4Q96JJ6 628 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms