RNA–Protein interactions for RNA: ENST00000409406.1

RBM4-205, Transcript of RNA binding motif protein 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RBM4, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM4-205ENST00000409406 NISCHQ9Y2I1 1504 aa28.69■■■□□ 2.18
RBM4-205ENST00000409406 CCDC180Q9P1Z9 1646 aa24.94■■□□□ 1.58
RBM4-205ENST00000409406 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
RBM4-205ENST00000409406 DCAF1Q9Y4B6 1507 aa23.69■■□□□ 1.38
RBM4-205ENST00000409406 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
RBM4-205ENST00000409406 ABCC9O60706 1549 aa23.57■■□□□ 1.36
RBM4-205ENST00000409406 SHROOM4Q9ULL8 1493 aa23.48■■□□□ 1.35
RBM4-205ENST00000409406 MYO15BQ96JP2 1530 aa23.37■■□□□ 1.33
RBM4-205ENST00000409406 NACADO15069 1562 aa23.21■■□□□ 1.31
RBM4-205ENST00000409406 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
RBM4-205ENST00000409406 SCRIBQ14160 1630 aa22.99■■□□□ 1.27
RBM4-205ENST00000409406 UNC13AQ9UPW8 1703 aa22.64■■□□□ 1.21
RBM4-205ENST00000409406 SUPT5HO00267 1087 aaKnown RBP22.62■■□□□ 1.21
RBM4-205ENST00000409406 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
RBM4-205ENST00000409406 CECR2Q9BXF3 1484 aa22.33■■□□□ 1.17
RBM4-205ENST00000409406 RSF1Q96T23 1441 aaPredicted RBP22.3■■□□□ 1.16
RBM4-205ENST00000409406 PABPN1Q86U42 306 aaKnown RBP eCLIP22.26■■□□□ 1.15
RBM4-205ENST00000409406 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
RBM4-205ENST00000409406 BAZ1AQ9NRL2 1556 aaPredicted RBP22.11■■□□□ 1.13
RBM4-205ENST00000409406 SMARCA4P51532 1647 aa22.03■■□□□ 1.12
RBM4-205ENST00000409406 WIZO95785 1651 aa22.03■■□□□ 1.12
RBM4-205ENST00000409406 PEG3Q9GZU2 1588 aa21.76■■□□□ 1.07
RBM4-205ENST00000409406 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
RBM4-205ENST00000409406 CHIC1Q5VXU3 224 aa21.71■■□□□ 1.07
RBM4-205ENST00000409406 EIF4G1Q04637 1599 aaKnown RBP21.66■■□□□ 1.06
RBM4-205ENST00000409406 ATAD2BQ9ULI0 1458 aa21.66■■□□□ 1.06
RBM4-205ENST00000409406 SMARCA2P51531 1590 aa21.61■■□□□ 1.05
RBM4-205ENST00000409406 CCDC88BA6NC98 1476 aa21.56■■□□□ 1.04
RBM4-205ENST00000409406 BAZ1BQ9UIG0 1483 aaKnown RBP21.51■■□□□ 1.03
RBM4-205ENST00000409406 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
RBM4-205ENST00000409406 HMGXB3Q12766 1538 aa21.4■■□□□ 1.02
RBM4-205ENST00000409406 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1.01
RBM4-205ENST00000409406 TRIM41Q8WV44 630 aa21.23■□□□□ 0.99
RBM4-205ENST00000409406 ABCC8Q09428 1581 aa21.15■□□□□ 0.98
RBM4-205ENST00000409406 HRCP23327 699 aa21.08■□□□□ 0.97
RBM4-205ENST00000409406 CFTRP13569 1480 aa21■□□□□ 0.95
RBM4-205ENST00000409406 WRNQ14191 1432 aaPredicted RBP eCLIP20.96■□□□□ 0.95
RBM4-205ENST00000409406 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
RBM4-205ENST00000409406 SYNJ1O43426 1573 aa20.9■□□□□ 0.94
RBM4-205ENST00000409406 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
RBM4-205ENST00000409406 PRDM2Q13029 1718 aa20.89■□□□□ 0.93
RBM4-205ENST00000409406 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.93
RBM4-205ENST00000409406 FAM9AQ8IZU1 332 aaPredicted RBP20.88■□□□□ 0.93
RBM4-205ENST00000409406 TOP2BQ02880 1626 aa20.79■□□□□ 0.92
RBM4-205ENST00000409406 SOGA1O94964 1423 aa20.77■□□□□ 0.92
RBM4-205ENST00000409406 BIVM-ERCC5R4GMW8 1640 aa20.77■□□□□ 0.91
RBM4-205ENST00000409406 NESP48681 1621 aa20.75■□□□□ 0.91
RBM4-205ENST00000409406 CUX1P39880 1505 aa20.74■□□□□ 0.91
RBM4-205ENST00000409406 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
RBM4-205ENST00000409406 LAMC3Q9Y6N6 1575 aa20.68■□□□□ 0.9
RBM4-205ENST00000409406 FANCD2Q9BXW9 1451 aa20.67■□□□□ 0.9
RBM4-205ENST00000409406 EEA1Q15075 1411 aa20.64■□□□□ 0.9
RBM4-205ENST00000409406 PELP1Q8IZL8 1130 aaKnown RBP20.64■□□□□ 0.89
RBM4-205ENST00000409406 EHMT2Q96KQ7 1210 aa20.61■□□□□ 0.89
RBM4-205ENST00000409406 CSRNP3Q8WYN3 585 aa20.59■□□□□ 0.89
RBM4-205ENST00000409406 PPARGC1BQ86YN6 1023 aaKnown RBP20.55■□□□□ 0.88
RBM4-205ENST00000409406 CEP164Q9UPV0 1460 aa20.51■□□□□ 0.87
RBM4-205ENST00000409406 PDS5BQ9NTI5 1447 aa20.51■□□□□ 0.87
RBM4-205ENST00000409406 DNMBPQ6XZF7 1577 aa20.49■□□□□ 0.87
RBM4-205ENST00000409406 KIF21AQ7Z4S6 1674 aa20.49■□□□□ 0.87
RBM4-205ENST00000409406 FGD5Q6ZNL6 1462 aa20.48■□□□□ 0.87
RBM4-205ENST00000409406 PCGF6Q9BYE7 350 aa20.47■□□□□ 0.87
RBM4-205ENST00000409406 TOPBP1Q92547 1522 aa20.47■□□□□ 0.87
RBM4-205ENST00000409406 URB2Q14146 1524 aaKnown RBP20.44■□□□□ 0.86
RBM4-205ENST00000409406 KIF21BO75037 1637 aa20.42■□□□□ 0.86
RBM4-205ENST00000409406 KIF27Q86VH2 1401 aa20.4■□□□□ 0.86
RBM4-205ENST00000409406 GOLGA3Q08378 1498 aa20.39■□□□□ 0.85
RBM4-205ENST00000409406 POLA1P09884 1462 aaPredicted RBP20.38■□□□□ 0.85
RBM4-205ENST00000409406 TNIKQ9UKE5 1360 aa20.36■□□□□ 0.85
RBM4-205ENST00000409406 CUX2O14529 1486 aa20.35■□□□□ 0.85
RBM4-205ENST00000409406 RAD54L2Q9Y4B4 1467 aa20.34■□□□□ 0.85
RBM4-205ENST00000409406 RAPGEF2Q9Y4G8 1499 aa20.33■□□□□ 0.85
RBM4-205ENST00000409406 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
RBM4-205ENST00000409406 UBTFP17480 764 aaKnown RBP20.31■□□□□ 0.84
RBM4-205ENST00000409406 ABCA10Q8WWZ4 1543 aa20.29■□□□□ 0.84
RBM4-205ENST00000409406 CEP162Q5TB80 1403 aa20.27■□□□□ 0.84
RBM4-205ENST00000409406 IGF1RP08069 1367 aa20.26■□□□□ 0.83
RBM4-205ENST00000409406 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
RBM4-205ENST00000409406 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
RBM4-205ENST00000409406 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
RBM4-205ENST00000409406 TARBP1Q13395 1621 aaKnown RBP20.18■□□□□ 0.82
RBM4-205ENST00000409406 WDR62O43379 1518 aa20.16■□□□□ 0.82
RBM4-205ENST00000409406 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
RBM4-205ENST00000409406 ABCA5Q8WWZ7 1642 aa20.13■□□□□ 0.81
RBM4-205ENST00000409406 CARMIL1Q5VZK9 1371 aa20.13■□□□□ 0.81
RBM4-205ENST00000409406 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
RBM4-205ENST00000409406 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
RBM4-205ENST00000409406 CLIP1P30622 1438 aa20.08■□□□□ 0.8
RBM4-205ENST00000409406 GAPVD1Q14C86 1478 aa20.07■□□□□ 0.8
RBM4-205ENST00000409406 CUL7Q14999 1698 aa20.05■□□□□ 0.8
RBM4-205ENST00000409406 SCAF1Q9H7N4 1312 aaKnown RBP20.02■□□□□ 0.8
RBM4-205ENST00000409406 IFT140Q96RY7 1462 aa20.01■□□□□ 0.79
RBM4-205ENST00000409406 RANGAP1P46060 587 aaPredicted RBP20■□□□□ 0.79
RBM4-205ENST00000409406 AQRO60306 1485 aaKnown RBP eCLIP19.99■□□□□ 0.793e-7■■■□□ 16.6
RBM4-205ENST00000409406 ZNF608Q9ULD9 1512 aaPredicted RBP19.97■□□□□ 0.79
RBM4-205ENST00000409406 PBRM1Q86U86 1689 aa19.97■□□□□ 0.79
RBM4-205ENST00000409406 MYT1Q01538 1121 aa19.95■□□□□ 0.78
RBM4-205ENST00000409406 TRIM26Q12899 539 aaPredicted RBP19.93■□□□□ 0.78
RBM4-205ENST00000409406 VPS8Q8N3P4 1428 aa19.92■□□□□ 0.78
RBM4-205ENST00000409406 ARAP1Q96P48 1450 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms