RNA–Protein interactions for RNA: ENST00000402554.7

NDEL1-203, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-203ENST00000402554 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
NDEL1-203ENST00000402554 CCDC180Q9P1Z9 1646 aa27.09■■□□□ 1.93
NDEL1-203ENST00000402554 ABCC9O60706 1549 aa26.54■■□□□ 1.84
NDEL1-203ENST00000402554 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
NDEL1-203ENST00000402554 RB1CC1Q8TDY2 1594 aa25.47■■□□□ 1.67
NDEL1-203ENST00000402554 NACADO15069 1562 aa25.42■■□□□ 1.66
NDEL1-203ENST00000402554 ZCCHC6Q5VYS8 1495 aaKnown RBP25.41■■□□□ 1.66
NDEL1-203ENST00000402554 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.63
NDEL1-203ENST00000402554 DCAF1Q9Y4B6 1507 aa25.14■■□□□ 1.62
NDEL1-203ENST00000402554 UNC13AQ9UPW8 1703 aa25.02■■□□□ 1.6
NDEL1-203ENST00000402554 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
NDEL1-203ENST00000402554 PABPN1Q86U42 306 aaKnown RBP eCLIP24.78■■□□□ 1.56
NDEL1-203ENST00000402554 BICRAQ9NZM4 1560 aa24.75■■□□□ 1.55
NDEL1-203ENST00000402554 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
NDEL1-203ENST00000402554 DNAJC5BQ9UF47 199 aa24.3■■□□□ 1.48
NDEL1-203ENST00000402554 EIF4G1Q04637 1599 aaKnown RBP24.08■■□□□ 1.45
NDEL1-203ENST00000402554 CC2D2AQ9P2K1 1620 aa24■■□□□ 1.43
NDEL1-203ENST00000402554 CECR2Q9BXF3 1484 aa23.79■■□□□ 1.4
NDEL1-203ENST00000402554 SMARCA4P51532 1647 aa23.68■■□□□ 1.38
NDEL1-203ENST00000402554 BAZ1AQ9NRL2 1556 aaPredicted RBP23.6■■□□□ 1.37
NDEL1-203ENST00000402554 MROH2BQ7Z745 1585 aa23.54■■□□□ 1.36
NDEL1-203ENST00000402554 ATAD2BQ9ULI0 1458 aa23.5■■□□□ 1.35
NDEL1-203ENST00000402554 SMARCA2P51531 1590 aa23.45■■□□□ 1.34
NDEL1-203ENST00000402554 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
NDEL1-203ENST00000402554 PEG3Q9GZU2 1588 aa23.38■■□□□ 1.33
NDEL1-203ENST00000402554 HMGXB3Q12766 1538 aa23.36■■□□□ 1.33
NDEL1-203ENST00000402554 WIZO95785 1651 aa23.33■■□□□ 1.33
NDEL1-203ENST00000402554 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
NDEL1-203ENST00000402554 RSF1Q96T23 1441 aaPredicted RBP23.23■■□□□ 1.31
NDEL1-203ENST00000402554 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
NDEL1-203ENST00000402554 TOP2AP11388 1531 aaKnown RBP23.01■■□□□ 1.27
NDEL1-203ENST00000402554 NESP48681 1621 aa22.99■■□□□ 1.27
NDEL1-203ENST00000402554 LAMC3Q9Y6N6 1575 aa22.85■■□□□ 1.25
NDEL1-203ENST00000402554 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
NDEL1-203ENST00000402554 CADPSQ9ULU8 1353 aa22.76■■□□□ 1.23
NDEL1-203ENST00000402554 KIF21AQ7Z4S6 1674 aa22.75■■□□□ 1.23
NDEL1-203ENST00000402554 CCDC88BA6NC98 1476 aa22.74■■□□□ 1.23
NDEL1-203ENST00000402554 CFTRP13569 1480 aa22.65■■□□□ 1.22
NDEL1-203ENST00000402554 PDS5BQ9NTI5 1447 aa22.65■■□□□ 1.22
NDEL1-203ENST00000402554 THOC2Q8NI27 1593 aaKnown RBP22.63■■□□□ 1.21
NDEL1-203ENST00000402554 PRDM2Q13029 1718 aa22.58■■□□□ 1.21
NDEL1-203ENST00000402554 FANCD2Q9BXW9 1451 aa22.55■■□□□ 1.2
NDEL1-203ENST00000402554 CEP164Q9UPV0 1460 aa22.52■■□□□ 1.2
NDEL1-203ENST00000402554 CUX2O14529 1486 aa22.51■■□□□ 1.19
NDEL1-203ENST00000402554 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
NDEL1-203ENST00000402554 WDR62O43379 1518 aa22.41■■□□□ 1.18
NDEL1-203ENST00000402554 URB2Q14146 1524 aaKnown RBP22.36■■□□□ 1.17
NDEL1-203ENST00000402554 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
NDEL1-203ENST00000402554 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
NDEL1-203ENST00000402554 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
NDEL1-203ENST00000402554 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
NDEL1-203ENST00000402554 CUX1P39880 1505 aa22.08■■□□□ 1.13
NDEL1-203ENST00000402554 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
NDEL1-203ENST00000402554 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
NDEL1-203ENST00000402554 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
NDEL1-203ENST00000402554 FGD5Q6ZNL6 1462 aa21.99■■□□□ 1.11
NDEL1-203ENST00000402554 TARBP1Q13395 1621 aaKnown RBP21.98■■□□□ 1.11
NDEL1-203ENST00000402554 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
NDEL1-203ENST00000402554 SYNJ1O43426 1573 aa21.93■■□□□ 1.1
NDEL1-203ENST00000402554 EIF4G3O43432 1585 aaKnown RBP21.93■■□□□ 1.1
NDEL1-203ENST00000402554 BIVM-ERCC5R4GMW8 1640 aa21.89■■□□□ 1.09
NDEL1-203ENST00000402554 SOGA1O94964 1423 aa21.89■■□□□ 1.09
NDEL1-203ENST00000402554 WRNQ14191 1432 aaPredicted RBP eCLIP21.89■■□□□ 1.09
NDEL1-203ENST00000402554 TOP2BQ02880 1626 aa21.87■■□□□ 1.09
NDEL1-203ENST00000402554 WDR97A6NE52 1622 aa21.85■■□□□ 1.09
NDEL1-203ENST00000402554 AQRO60306 1485 aaKnown RBP eCLIP21.85■■□□□ 1.096e-9■■■■□ 20
NDEL1-203ENST00000402554 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
NDEL1-203ENST00000402554 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
NDEL1-203ENST00000402554 ABCA10Q8WWZ4 1543 aa21.73■■□□□ 1.07
NDEL1-203ENST00000402554 PBRM1Q86U86 1689 aa21.71■■□□□ 1.07
NDEL1-203ENST00000402554 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
NDEL1-203ENST00000402554 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
NDEL1-203ENST00000402554 CHD1O14646 1710 aa21.68■■□□□ 1.06
NDEL1-203ENST00000402554 SNAPC4Q5SXM2 1469 aa21.66■■□□□ 1.06
NDEL1-203ENST00000402554 GAPVD1Q14C86 1478 aa21.65■■□□□ 1.06
NDEL1-203ENST00000402554 GRIN2BQ13224 1484 aa21.63■■□□□ 1.05
NDEL1-203ENST00000402554 FBLN2P98095 1184 aa21.57■■□□□ 1.04
NDEL1-203ENST00000402554 MAGI1Q96QZ7 1491 aaPredicted RBP21.56■■□□□ 1.04
NDEL1-203ENST00000402554 OSCARQ8IYS5 282 aa21.56■■□□□ 1.04
NDEL1-203ENST00000402554 ADAMTS12P58397 1594 aa21.5■■□□□ 1.03
NDEL1-203ENST00000402554 SYNJ2O15056 1496 aa21.49■■□□□ 1.03
NDEL1-203ENST00000402554 ERICH3Q5RHP9 1530 aa21.46■■□□□ 1.03
NDEL1-203ENST00000402554 CHMP7Q8WUX9 453 aaPredicted RBP21.45■■□□□ 1.02
NDEL1-203ENST00000402554 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
NDEL1-203ENST00000402554 GRIN2AQ12879 1464 aa21.38■■□□□ 1.01
NDEL1-203ENST00000402554 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
NDEL1-203ENST00000402554 CLASP1Q7Z460 1538 aa21.37■■□□□ 1.01
NDEL1-203ENST00000402554 RIMBP3CA6NJZ7 1639 aa21.35■■□□□ 1.01
NDEL1-203ENST00000402554 RIMBP3BA6NNM3 1639 aa21.35■■□□□ 1.01
NDEL1-203ENST00000402554 RIMBP3Q9UFD9 1639 aa21.35■■□□□ 1.01
NDEL1-203ENST00000402554 RUSC2Q8N2Y8 1516 aa21.34■■□□□ 1.01
NDEL1-203ENST00000402554 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
NDEL1-203ENST00000402554 CEP170Q5SW79 1584 aa21.33■■□□□ 1.01
NDEL1-203ENST00000402554 IGF1RP08069 1367 aa21.32■■□□□ 1
NDEL1-203ENST00000402554 FAM9AQ8IZU1 332 aaPredicted RBP21.32■■□□□ 1
NDEL1-203ENST00000402554 CUL7Q14999 1698 aa21.31■■□□□ 1
NDEL1-203ENST00000402554 ARHGEF11O15085 1522 aa21.31■■□□□ 1
NDEL1-203ENST00000402554 NUP160Q12769 1436 aa21.26■□□□□ 0.99
NDEL1-203ENST00000402554 CARMIL1Q5VZK9 1371 aa21.2■□□□□ 0.98
NDEL1-203ENST00000402554 ARAP1Q96P48 1450 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms