Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 AP006587.3-201ENST00000525742 1516 ntBASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHA13Q9Y5I0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.58■■□□□ 1.2
PCDHA13Q9Y5I0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
PCDHA13Q9Y5I0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 AC136469.2-201ENST00000623944 1028 ntBASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHA13Q9Y5I0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHA13Q9Y5I0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 DUX4L19-201ENST00000557448 1267 ntBASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.55■■□□□ 1.2
PCDHA13Q9Y5I0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 MIR4466-201ENST00000606121 54 ntBASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.54■■□□□ 1.2
PCDHA13Q9Y5I0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 AC011298.3-201ENST00000615796 283 ntBASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHA13Q9Y5I0 AC092667.1-201ENST00000434301 2586 ntBASIC22.52■■□□□ 1.2
PCDHA13Q9Y5I0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHA13Q9Y5I0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA13Q9Y5I0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHA13Q9Y5I0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHA13Q9Y5I0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
PCDHA13Q9Y5I0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHA13Q9Y5I0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHA13Q9Y5I0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms