Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SHCBP1LQ9BZQ2 LINC01521-201ENST00000504184 1943 ntBASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 LINC01006-201ENST00000333319 2292 ntBASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SHCBP1LQ9BZQ2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 OXCT2P1-201ENST00000447263 1535 ntBASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHCBP1LQ9BZQ2 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 DUX4L19-201ENST00000557448 1267 ntBASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SHCBP1LQ9BZQ2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 AC003102.1-202ENST00000563394 1796 ntBASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 AP004607.7-201ENST00000527152 1677 ntBASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 AL121603.2-201ENST00000557373 2117 ntBASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 SERBP1P1-201ENST00000396021 1160 ntBASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHCBP1LQ9BZQ2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.77■□□□□ 0.91
SHCBP1LQ9BZQ2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SHCBP1LQ9BZQ2 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.77■□□□□ 0.91
SHCBP1LQ9BZQ2 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SHCBP1LQ9BZQ2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHCBP1LQ9BZQ2 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHCBP1LQ9BZQ2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 AL138724.1-201ENST00000606771 1088 ntBASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SHCBP1LQ9BZQ2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms