Protein–RNA interactions for Protein: Q8TA86

RP9, Retinitis pigmentosa 9 protein, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP9Q8TA86 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.32■□□□□ 0.84
RP9Q8TA86 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RP9Q8TA86 AC003102.1-202ENST00000563394 1796 ntBASIC20.32■□□□□ 0.84
RP9Q8TA86 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.32■□□□□ 0.84
RP9Q8TA86 AL034346.1-201ENST00000568244 1277 ntBASIC20.32■□□□□ 0.84
RP9Q8TA86 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
RP9Q8TA86 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RP9Q8TA86 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RP9Q8TA86 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.31■□□□□ 0.84
RP9Q8TA86 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.31■□□□□ 0.84
RP9Q8TA86 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RP9Q8TA86 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RP9Q8TA86 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
RP9Q8TA86 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RP9Q8TA86 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RP9Q8TA86 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.31■□□□□ 0.84
RP9Q8TA86 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RP9Q8TA86 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RP9Q8TA86 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RP9Q8TA86 AC087239.1-201ENST00000622671 572 ntBASIC20.3■□□□□ 0.84
RP9Q8TA86 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.3■□□□□ 0.84
RP9Q8TA86 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.3■□□□□ 0.84
RP9Q8TA86 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.3■□□□□ 0.84
RP9Q8TA86 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.3■□□□□ 0.84
RP9Q8TA86 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RP9Q8TA86 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RP9Q8TA86 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RP9Q8TA86 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RP9Q8TA86 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.29■□□□□ 0.84
RP9Q8TA86 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.29■□□□□ 0.84
RP9Q8TA86 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RP9Q8TA86 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
RP9Q8TA86 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RP9Q8TA86 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RP9Q8TA86 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RP9Q8TA86 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RP9Q8TA86 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.29■□□□□ 0.84
RP9Q8TA86 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.29■□□□□ 0.84
RP9Q8TA86 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RP9Q8TA86 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
RP9Q8TA86 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RP9Q8TA86 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RP9Q8TA86 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RP9Q8TA86 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.29■□□□□ 0.84
RP9Q8TA86 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RP9Q8TA86 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RP9Q8TA86 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.28■□□□□ 0.84
RP9Q8TA86 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RP9Q8TA86 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RP9Q8TA86 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.28■□□□□ 0.84
RP9Q8TA86 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
RP9Q8TA86 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RP9Q8TA86 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RP9Q8TA86 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.28■□□□□ 0.84
RP9Q8TA86 AL117332.1-201ENST00000622628 974 ntBASIC20.28■□□□□ 0.84
RP9Q8TA86 AC012354.3-201ENST00000623734 483 ntBASIC20.28■□□□□ 0.84
RP9Q8TA86 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RP9Q8TA86 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RP9Q8TA86 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RP9Q8TA86 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.28■□□□□ 0.84
RP9Q8TA86 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RP9Q8TA86 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RP9Q8TA86 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RP9Q8TA86 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.27■□□□□ 0.84
RP9Q8TA86 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RP9Q8TA86 PLK5-205ENST00000642079 1969 ntBASIC20.27■□□□□ 0.84
RP9Q8TA86 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RP9Q8TA86 AL033527.3-201ENST00000566366 1196 ntBASIC20.27■□□□□ 0.84
RP9Q8TA86 pRNA.6-201ENST00000610482 90 ntBASIC20.27■□□□□ 0.84
RP9Q8TA86 pRNA.5-201ENST00000612139 90 ntBASIC20.27■□□□□ 0.84
RP9Q8TA86 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RP9Q8TA86 pRNA.11-201ENST00000618423 90 ntBASIC20.27■□□□□ 0.84
RP9Q8TA86 pRNA.13-201ENST00000619112 90 ntBASIC20.27■□□□□ 0.84
RP9Q8TA86 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RP9Q8TA86 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.27■□□□□ 0.84
RP9Q8TA86 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms