Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TMEFF1Q8IYR6 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEFF1Q8IYR6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEFF1Q8IYR6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
TMEFF1Q8IYR6 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEFF1Q8IYR6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.08■□□□□ 0.96
TMEFF1Q8IYR6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMEFF1Q8IYR6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TMEFF1Q8IYR6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TMEFF1Q8IYR6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 AC010980.2-201ENST00000587099 1412 ntBASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 POU5F1P4-201ENST00000413175 1085 ntBASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 AC091874.3-201ENST00000512672 1195 ntBASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 AP006294.2-201ENST00000641667 209 ntBASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
TMEFF1Q8IYR6 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 GCSHP5-201ENST00000443090 522 ntBASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 AL158047.1-201ENST00000445918 881 ntBASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 AL591742.1-201ENST00000604433 565 ntBASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 AC006058.3-201ENST00000606217 1069 ntBASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TMEFF1Q8IYR6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 C9orf163-202ENST00000624034 2573 ntBASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.05■□□□□ 0.96
TMEFF1Q8IYR6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 RBM17P2-201ENST00000616397 1405 ntBASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.04■□□□□ 0.96
TMEFF1Q8IYR6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms