Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC62Q6P9F0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 AC098934.4-201ENST00000564127 592 ntBASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC62Q6P9F0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC62Q6P9F0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.83■■□□□ 1.4
CCDC62Q6P9F0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.83■■□□□ 1.4
CCDC62Q6P9F0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.83■■□□□ 1.4
CCDC62Q6P9F0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CCDC62Q6P9F0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC62Q6P9F0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
CCDC62Q6P9F0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 AC120498.10-201ENST00000621827 505 ntBASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC62Q6P9F0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 AC133041.1-202ENST00000642053 222 ntBASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 AC092053.2-201ENST00000640557 1818 ntBASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 KRT16P2-201ENST00000414673 1423 ntBASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC62Q6P9F0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 RBM17P2-201ENST00000616397 1405 ntBASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 OR10C1-204ENST00000622521 1039 ntBASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCDC62Q6P9F0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 AC080038.3-201ENST00000623346 1952 ntBASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC62Q6P9F0 AC061975.6-201ENST00000579045 1553 ntBASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 AL512625.2-201ENST00000417533 625 ntBASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 C1orf229-201ENST00000623686 2258 ntBASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 AC127496.7-201ENST00000625110 1798 ntBASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC62Q6P9F0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC62Q6P9F0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms