Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 PMT4YJR143C 2289 nt2.73□□□□□ -1.97
TY1B-JR1P47098 DIT1YDR403W 1611 nt2.73□□□□□ -1.97
TY1B-JR1P47098 SLX8YER116C 825 nt2.72□□□□□ -1.97
TY1B-JR1P47098 YHL006W-AYHL006W-A 354 nt2.72□□□□□ -1.97
TY1B-JR1P47098 YIL024CYIL024C 570 nt2.72□□□□□ -1.97
TY1B-JR1P47098 YVH1YIR026C 1095 nt2.72□□□□□ -1.97
TY1B-JR1P47098 YMR194C-AYMR194C-A 225 nt2.72□□□□□ -1.97
TY1B-JR1P47098 IDH2YOR136W 1110 nt2.72□□□□□ -1.97
TY1B-JR1P47098 MRM1YOR201C 1239 nt2.72□□□□□ -1.97
TY1B-JR1P47098 GRR1YJR090C 3456 nt2.72□□□□□ -1.97
TY1B-JR1P47098 YLR230WYLR230W 306 nt2.72□□□□□ -1.97
TY1B-JR1P47098 YBL012CYBL012C 402 nt2.72□□□□□ -1.97
TY1B-JR1P47098 RPL27BYDR471W 411 nt2.71□□□□□ -1.98
TY1B-JR1P47098 YAL026C-AYAL026C-A 438 nt2.71□□□□□ -1.98
TY1B-JR1P47098 POS5YPL188W 1245 nt2.71□□□□□ -1.98
TY1B-JR1P47098 ADY4YLR227C 1482 nt2.71□□□□□ -1.98
TY1B-JR1P47098 OST6YML019W 999 nt2.7□□□□□ -1.98
TY1B-JR1P47098 TRM7YBR061C 933 nt2.7□□□□□ -1.98
TY1B-JR1P47098 YAR1YPL239W 603 nt2.7□□□□□ -1.98
TY1B-JR1P47098 ECM29YHL030W 5607 nt2.7□□□□□ -1.98
TY1B-JR1P47098 SCH9YHR205W 2475 nt2.7□□□□□ -1.98
TY1B-JR1P47098 LYS9YNR050C 1341 nt2.7□□□□□ -1.98
TY1B-JR1P47098 GLO3YER122C 1482 nt2.69□□□□□ -1.98
TY1B-JR1P47098 HYP2YEL034W 474 nt2.69□□□□□ -1.98
TY1B-JR1P47098 FAF1YIL019W 1041 nt2.69□□□□□ -1.98
TY1B-JR1P47098 PCD1YLR151C 1023 nt2.69□□□□□ -1.98
TY1B-JR1P47098 YLR154C-HYLR154C-H 132 nt2.69□□□□□ -1.98
TY1B-JR1P47098 YLR156C-AYLR156C-A 132 nt2.69□□□□□ -1.98
TY1B-JR1P47098 YLR157C-CYLR157C-C 132 nt2.69□□□□□ -1.98
TY1B-JR1P47098 YLR159C-AYLR159C-A 132 nt2.69□□□□□ -1.98
TY1B-JR1P47098 YBT1YLL048C 4986 nt2.69□□□□□ -1.98
TY1B-JR1P47098 STF2YGR008C 255 nt2.69□□□□□ -1.98
TY1B-JR1P47098 FRE2YKL220C 2136 nt2.69□□□□□ -1.98
TY1B-JR1P47098 GPB1YOR371C 2694 nt2.68□□□□□ -1.98
TY1B-JR1P47098 MMM1YLL006W 1281 nt2.68□□□□□ -1.98
TY1B-JR1P47098 SSU72YNL222W 621 nt2.68□□□□□ -1.98
TY1B-JR1P47098 RAD50YNL250W 3939 nt2.68□□□□□ -1.98
TY1B-JR1P47098 VHR2YER064C 1518 nt2.68□□□□□ -1.98
TY1B-JR1P47098 ECM7YLR443W 1347 nt2.67□□□□□ -1.98
TY1B-JR1P47098 AML1YGR001C 747 nt2.67□□□□□ -1.98
TY1B-JR1P47098 YLR428CYLR428C 345 nt2.67□□□□□ -1.98
TY1B-JR1P47098 TPT1YOL102C 693 nt2.67□□□□□ -1.98
TY1B-JR1P47098 YPR077CYPR077C 372 nt2.67□□□□□ -1.98
TY1B-JR1P47098 UTP14YML093W 2700 nt2.67□□□□□ -1.98
TY1B-JR1P47098 IOC3YFR013W 2364 nt2.67□□□□□ -1.98
TY1B-JR1P47098 SWD2YKL018W 990 nt2.66□□□□□ -1.98
TY1B-JR1P47098 YSA1YBR111C 696 nt2.66□□□□□ -1.98
TY1B-JR1P47098 NUM1YDR150W 8247 nt2.66□□□□□ -1.98
TY1B-JR1P47098 THI22YPR121W 1719 nt2.66□□□□□ -1.98
TY1B-JR1P47098 SPR28YDR218C 1272 nt2.66□□□□□ -1.98
TY1B-JR1P47098 ORM1YGR038W 669 nt2.66□□□□□ -1.98
TY1B-JR1P47098 YOR392WYOR392W 444 nt2.66□□□□□ -1.98
TY1B-JR1P47098 YBR287WYBR287W 1284 nt2.66□□□□□ -1.98
TY1B-JR1P47098 SNU114YKL173W 3027 nt2.66□□□□□ -1.98
TY1B-JR1P47098 ERT1YBR239C 1590 nt2.65□□□□□ -1.98
TY1B-JR1P47098 SNM1YDR478W 597 nt2.65□□□□□ -1.99
TY1B-JR1P47098 TWF1YGR080W 999 nt2.65□□□□□ -1.99
TY1B-JR1P47098 SGM1YJR134C 2124 nt2.65□□□□□ -1.99
TY1B-JR1P47098 YLL047WYLL047W 384 nt2.65□□□□□ -1.99
TY1B-JR1P47098 YHC1YLR298C 696 nt2.65□□□□□ -1.99
TY1B-JR1P47098 CUS2YNL286W 858 nt2.65□□□□□ -1.99
TY1B-JR1P47098 YOR034C-AYOR034C-A 243 nt2.65□□□□□ -1.99
TY1B-JR1P47098 SAC3YDR159W 3906 nt2.65□□□□□ -1.99
TY1B-JR1P47098 TRM732YMR259C 4263 nt2.64□□□□□ -1.99
TY1B-JR1P47098 MSN4YKL062W 1893 nt2.64□□□□□ -1.99
TY1B-JR1P47098 FAB1YFR019W 6837 nt2.64□□□□□ -1.99
TY1B-JR1P47098 ADK1YDR226W 669 nt2.64□□□□□ -1.99
TY1B-JR1P47098 PIB1YDR313C 861 nt2.64□□□□□ -1.99
TY1B-JR1P47098 YIL046W-AYIL046W-A 165 nt2.64□□□□□ -1.99
TY1B-JR1P47098 JJJ3YJR097W 519 nt2.64□□□□□ -1.99
TY1B-JR1P47098 MUD1YBR119W 897 nt2.64□□□□□ -1.99
TY1B-JR1P47098 LTE1YAL024C 4308 nt2.63□□□□□ -1.99
TY1B-JR1P47098 ATG29YPL166W 642 nt2.63□□□□□ -1.99
TY1B-JR1P47098 SNX41YDR425W 1878 nt2.63□□□□□ -1.99
TY1B-JR1P47098 RKM3YBR030W 1659 nt2.62□□□□□ -1.99
TY1B-JR1P47098 SKN7YHR206W 1869 nt2.62□□□□□ -1.99
TY1B-JR1P47098 MDM20YOL076W 2391 nt2.62□□□□□ -1.99
TY1B-JR1P47098 RTS3YGR161C 792 nt2.62□□□□□ -1.99
TY1B-JR1P47098 AIM39YOL053W 1188 nt2.62□□□□□ -1.99
TY1B-JR1P47098 HEM4YOR278W 828 nt2.62□□□□□ -1.99
TY1B-JR1P47098 BTS1YPL069C 1008 nt2.61□□□□□ -1.99
TY1B-JR1P47098 SPC72YAL047C 1869 nt2.61□□□□□ -1.99
TY1B-JR1P47098 SAE2YGL175C 1038 nt2.61□□□□□ -1.99
TY1B-JR1P47098 ERV29YGR284C 933 nt2.61□□□□□ -1.99
TY1B-JR1P47098 KOG1YHR186C 4674 nt2.61□□□□□ -1.99
TY1B-JR1P47098 GCD7YLR291C 1146 nt2.61□□□□□ -1.99
TY1B-JR1P47098 TMA16YOR252W 537 nt2.61□□□□□ -1.99
TY1B-JR1P47098 PRT1YOR361C 2292 nt2.6□□□□□ -1.99
TY1B-JR1P47098 DSL1YNL258C 2265 nt2.6□□□□□ -1.99
TY1B-JR1P47098 YOS1YER074W-A 258 nt2.6□□□□□ -1.99
TY1B-JR1P47098 UBP12YJL197W 3765 nt2.6□□□□□ -1.99
TY1B-JR1P47098 CHS1YNL192W 3396 nt2.59□□□□□ -1.99
TY1B-JR1P47098 snR37snR37 386 nt2.59□□□□□ -1.99
TY1B-JR1P47098 NCB2YDR397C 441 nt2.59□□□□□ -2
TY1B-JR1P47098 SEC28YIL076W 891 nt2.59□□□□□ -2
TY1B-JR1P47098 SEC7YDR170C 6030 nt2.58□□□□□ -2
TY1B-JR1P47098 NAT1YDL040C 2565 nt2.58□□□□□ -2
TY1B-JR1P47098 IML1YJR138W 4755 nt2.58□□□□□ -2
TY1B-JR1P47098 YJL181WYJL181W 1836 nt2.58□□□□□ -2
TY1B-JR1P47098 YDL041WYDL041W 354 nt2.58□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 28.3 ms