Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL1A2P08123 AC026471.6-201ENST00000622954 1905 ntBASIC23.34■■□□□ 1.33
COL1A2P08123 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
COL1A2P08123 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
COL1A2P08123 AL162412.1-201ENST00000567129 965 ntBASIC23.34■■□□□ 1.33
COL1A2P08123 AC105036.2-201ENST00000569468 176 ntBASIC23.34■■□□□ 1.33
COL1A2P08123 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.34■■□□□ 1.33
COL1A2P08123 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
COL1A2P08123 OR10C1-204ENST00000622521 1039 ntBASIC23.34■■□□□ 1.33
COL1A2P08123 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL1A2P08123 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL1A2P08123 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
COL1A2P08123 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL1A2P08123 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
COL1A2P08123 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
COL1A2P08123 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL1A2P08123 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
COL1A2P08123 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
COL1A2P08123 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
COL1A2P08123 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
COL1A2P08123 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.32■■□□□ 1.32
COL1A2P08123 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.32■■□□□ 1.32
COL1A2P08123 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.32■■□□□ 1.32
COL1A2P08123 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL1A2P08123 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL1A2P08123 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.32■■□□□ 1.32
COL1A2P08123 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC23.32■■□□□ 1.32
COL1A2P08123 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL1A2P08123 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
COL1A2P08123 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
COL1A2P08123 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.32■■□□□ 1.32
COL1A2P08123 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL1A2P08123 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
COL1A2P08123 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL1A2P08123 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL1A2P08123 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.31■■□□□ 1.32
COL1A2P08123 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
COL1A2P08123 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL1A2P08123 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL1A2P08123 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.31■■□□□ 1.32
COL1A2P08123 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.31■■□□□ 1.32
COL1A2P08123 AC069236.1-201ENST00000604339 616 ntBASIC23.31■■□□□ 1.32
COL1A2P08123 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.31■■□□□ 1.32
COL1A2P08123 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
COL1A2P08123 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL1A2P08123 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL1A2P08123 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL1A2P08123 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC23.31■■□□□ 1.32
COL1A2P08123 AC242852.2-201ENST00000615738 1807 ntBASIC23.31■■□□□ 1.32
COL1A2P08123 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.31■■□□□ 1.32
COL1A2P08123 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.31■■□□□ 1.32
COL1A2P08123 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
COL1A2P08123 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
COL1A2P08123 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL1A2P08123 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
COL1A2P08123 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.3■■□□□ 1.32
COL1A2P08123 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
COL1A2P08123 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL1A2P08123 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.3■■□□□ 1.32
COL1A2P08123 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.3■■□□□ 1.32
COL1A2P08123 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.3■■□□□ 1.32
COL1A2P08123 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC23.3■■□□□ 1.32
COL1A2P08123 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
COL1A2P08123 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.3■■□□□ 1.32
COL1A2P08123 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.3■■□□□ 1.32
COL1A2P08123 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
COL1A2P08123 AC010542.4-201ENST00000563151 1910 ntBASIC23.3■■□□□ 1.32
COL1A2P08123 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.3■■□□□ 1.32
COL1A2P08123 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL1A2P08123 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
COL1A2P08123 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
COL1A2P08123 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
COL1A2P08123 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL1A2P08123 AL512625.2-201ENST00000417533 625 ntBASIC23.29■■□□□ 1.32
COL1A2P08123 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.29■■□□□ 1.32
COL1A2P08123 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.29■■□□□ 1.32
COL1A2P08123 AL138781.1-201ENST00000566567 1274 ntBASIC23.29■■□□□ 1.32
COL1A2P08123 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL1A2P08123 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
COL1A2P08123 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.29■■□□□ 1.32
COL1A2P08123 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL1A2P08123 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
COL1A2P08123 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
COL1A2P08123 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL1A2P08123 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
COL1A2P08123 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
COL1A2P08123 AC073210.2-201ENST00000430369 194 ntBASIC23.28■■□□□ 1.32
COL1A2P08123 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL1A2P08123 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.28■■□□□ 1.32
COL1A2P08123 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.28■■□□□ 1.32
COL1A2P08123 AL591742.1-201ENST00000604433 565 ntBASIC23.28■■□□□ 1.32
COL1A2P08123 AC008694.1-202ENST00000636953 945 ntBASIC23.28■■□□□ 1.32
COL1A2P08123 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL1A2P08123 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.28■■□□□ 1.32
COL1A2P08123 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
COL1A2P08123 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL1A2P08123 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
COL1A2P08123 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
COL1A2P08123 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
COL1A2P08123 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms