Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 YNR071CYNR071C 1029 nt2.87□□□□□ -1.95
TY1B-HO13535 RPC40YPR110C 1008 nt2.87□□□□□ -1.95
TY1B-HO13535 YBR197CYBR197C 654 nt2.87□□□□□ -1.95
TY1B-HO13535 BSD2YBR290W 966 nt2.87□□□□□ -1.95
TY1B-HO13535 VPH1YOR270C 2523 nt2.86□□□□□ -1.95
TY1B-HO13535 YDR089WYDR089W 2610 nt2.86□□□□□ -1.95
TY1B-HO13535 MIF2YKL089W 1650 nt2.86□□□□□ -1.95
TY1B-HO13535 YJL147CYJL147C 1149 nt2.86□□□□□ -1.95
TY1B-HO13535 BOS1YLR078C 735 nt2.86□□□□□ -1.95
TY1B-HO13535 YLR326WYLR326W 723 nt2.86□□□□□ -1.95
TY1B-HO13535 ADI1YMR009W 540 nt2.86□□□□□ -1.95
TY1B-HO13535 COA6YMR244C-A 315 nt2.86□□□□□ -1.95
TY1B-HO13535 NUF2YOL069W 1356 nt2.86□□□□□ -1.95
TY1B-HO13535 SXM1YDR395W 2835 nt2.86□□□□□ -1.95
TY1B-HO13535 YCR050CYCR050C 309 nt2.85□□□□□ -1.95
TY1B-HO13535 YHR073W-AYHR073W-A 177 nt2.85□□□□□ -1.95
TY1B-HO13535 PEX17YNL214W 600 nt2.85□□□□□ -1.95
TY1B-HO13535 MMS1YPR164W 4224 nt2.85□□□□□ -1.95
TY1B-HO13535 TPD3YAL016W 1908 nt2.85□□□□□ -1.95
TY1B-HO13535 TOF1YNL273W 3717 nt2.85□□□□□ -1.95
TY1B-HO13535 INA17YPL099C 549 nt2.84□□□□□ -1.95
TY1B-HO13535 YJR039WYJR039W 3366 nt2.84□□□□□ -1.95
TY1B-HO13535 IBA57YJR122W 1494 nt2.84□□□□□ -1.95
TY1B-HO13535 MDS3YGL197W 4464 nt2.84□□□□□ -1.95
TY1B-HO13535 GLO3YER122C 1482 nt2.84□□□□□ -1.96
TY1B-HO13535 YCR013CYCR013C 648 nt2.84□□□□□ -1.96
TY1B-HO13535 YEL018C-AYEL018C-A 534 nt2.84□□□□□ -1.96
TY1B-HO13535 YLR154C-HYLR154C-H 132 nt2.84□□□□□ -1.96
TY1B-HO13535 YLR156C-AYLR156C-A 132 nt2.84□□□□□ -1.96
TY1B-HO13535 YLR157C-CYLR157C-C 132 nt2.84□□□□□ -1.96
TY1B-HO13535 YLR159C-AYLR159C-A 132 nt2.84□□□□□ -1.96
TY1B-HO13535 ELO3YLR372W 1038 nt2.84□□□□□ -1.96
TY1B-HO13535 ESC1YMR219W 4977 nt2.84□□□□□ -1.96
TY1B-HO13535 SMI1YGR229C 1518 nt2.83□□□□□ -1.96
TY1B-HO13535 BRR6YGL247W 594 nt2.83□□□□□ -1.96
TY1B-HO13535 YVH1YIR026C 1095 nt2.83□□□□□ -1.96
TY1B-HO13535 MMM1YLL006W 1281 nt2.83□□□□□ -1.96
TY1B-HO13535 YOR333CYOR333C 417 nt2.83□□□□□ -1.96
TY1B-HO13535 MGR3YMR115W 1506 nt2.83□□□□□ -1.96
TY1B-HO13535 SKI3YPR189W 4299 nt2.83□□□□□ -1.96
TY1B-HO13535 JSN1YJR091C 3276 nt2.83□□□□□ -1.96
TY1B-HO13535 YDR131CYDR131C 1671 nt2.83□□□□□ -1.96
TY1B-HO13535 NFI1YOR156C 2181 nt2.83□□□□□ -1.96
TY1B-HO13535 CNM67YNL225C 1746 nt2.82□□□□□ -1.96
TY1B-HO13535 TIF35YDR429C 825 nt2.82□□□□□ -1.96
TY1B-HO13535 YER165C-AYER165C-A 357 nt2.82□□□□□ -1.96
TY1B-HO13535 SPS4YOR313C 1017 nt2.82□□□□□ -1.96
TY1B-HO13535 SAS4YDR181C 1446 nt2.82□□□□□ -1.96
TY1B-HO13535 TTI1YKL033W 3117 nt2.82□□□□□ -1.96
TY1B-HO13535 IOC3YFR013W 2364 nt2.82□□□□□ -1.96
TY1B-HO13535 ALY1YKR021W 2748 nt2.81□□□□□ -1.96
TY1B-HO13535 TRM13YOL125W 1431 nt2.81□□□□□ -1.96
TY1B-HO13535 JID1YPR061C 906 nt2.81□□□□□ -1.96
TY1B-HO13535 NRP1YDL167C 2160 nt2.8□□□□□ -1.96
TY1B-HO13535 PCD1YLR151C 1023 nt2.8□□□□□ -1.96
TY1B-HO13535 YMR310CYMR310C 954 nt2.8□□□□□ -1.96
TY1B-HO13535 PHO81YGR233C 3537 nt2.8□□□□□ -1.96
TY1B-HO13535 HDA2YDR295C 2025 nt2.8□□□□□ -1.96
TY1B-HO13535 DOT6YER088C 2013 nt2.8□□□□□ -1.96
TY1B-HO13535 STH1YIL126W 4080 nt2.79□□□□□ -1.96
TY1B-HO13535 OCT1YKL134C 2319 nt2.79□□□□□ -1.96
TY1B-HO13535 YDL162CYDL162C 357 nt2.79□□□□□ -1.96
TY1B-HO13535 PET191YJR034W 327 nt2.79□□□□□ -1.96
TY1B-HO13535 SLH1YGR271W 5904 nt2.78□□□□□ -1.96
TY1B-HO13535 CDC73YLR418C 1182 nt2.78□□□□□ -1.96
TY1B-HO13535 TOP1YOL006C 2310 nt2.78□□□□□ -1.96
TY1B-HO13535 GIS1YDR096W 2685 nt2.78□□□□□ -1.96
TY1B-HO13535 YEL043WYEL043W 2871 nt2.77□□□□□ -1.97
TY1B-HO13535 EXO84YBR102C 2262 nt2.77□□□□□ -1.97
TY1B-HO13535 GUK1YDR454C 564 nt2.77□□□□□ -1.97
TY1B-HO13535 SOL3YHR163W 750 nt2.77□□□□□ -1.97
TY1B-HO13535 ARF3YOR094W 552 nt2.77□□□□□ -1.97
TY1B-HO13535 YKR078WYKR078W 1758 nt2.77□□□□□ -1.97
TY1B-HO13535 PEX10YDR265W 1014 nt2.77□□□□□ -1.97
TY1B-HO13535 PSR1YLL010C 1284 nt2.76□□□□□ -1.97
TY1B-HO13535 MEI5YPL121C 669 nt2.76□□□□□ -1.97
TY1B-HO13535 PSK1YAL017W 4071 nt2.76□□□□□ -1.97
TY1B-HO13535 CDC55YGL190C 1581 nt2.76□□□□□ -1.97
TY1B-HO13535 MSH6YDR097C 3729 nt2.75□□□□□ -1.97
TY1B-HO13535 CPR8YNR028W 927 nt2.75□□□□□ -1.97
TY1B-HO13535 MIH1YMR036C 1665 nt2.74□□□□□ -1.97
TY1B-HO13535 SEN54YPL083C 1404 nt2.74□□□□□ -1.97
TY1B-HO13535 YIR040CYIR040C 333 nt2.74□□□□□ -1.97
TY1B-HO13535 RUF21RUF21 707 nt2.74□□□□□ -1.97
TY1B-HO13535 RGA1YOR127W 3024 nt2.74□□□□□ -1.97
TY1B-HO13535 VPS34YLR240W 2628 nt2.74□□□□□ -1.97
TY1B-HO13535 YDL242WYDL242W 354 nt2.73□□□□□ -1.97
TY1B-HO13535 YRB1YDR002W 606 nt2.73□□□□□ -1.97
TY1B-HO13535 YHI9YHR029C 885 nt2.73□□□□□ -1.97
TY1B-HO13535 SPS2YDR522C 1509 nt2.73□□□□□ -1.97
TY1B-HO13535 GPB1YOR371C 2694 nt2.73□□□□□ -1.97
TY1B-HO13535 RPS18AYDR450W 441 nt2.72□□□□□ -1.97
TY1B-HO13535 YHL006W-AYHL006W-A 354 nt2.72□□□□□ -1.97
TY1B-HO13535 YIL024CYIL024C 570 nt2.72□□□□□ -1.97
TY1B-HO13535 YMR194C-AYMR194C-A 225 nt2.72□□□□□ -1.97
TY1B-HO13535 NAT1YDL040C 2565 nt2.72□□□□□ -1.97
TY1B-HO13535 YLR345WYLR345W 1530 nt2.72□□□□□ -1.97
TY1B-HO13535 GRR1YJR090C 3456 nt2.72□□□□□ -1.97
TY1B-HO13535 YLR230WYLR230W 306 nt2.72□□□□□ -1.97
TY1B-HO13535 YBL012CYBL012C 402 nt2.72□□□□□ -1.97
Retrieved 100 of 7,029 protein–RNA pairs in 51 ms