Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRGV1A0A0A0MS02 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRGV1A0A0A0MS02 ASL-203ENST00000380839 1765 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 AL136967.2-201ENST00000623968 743 ntBASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRGV1A0A0A0MS02 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 AL031432.3-201ENST00000607698 485 ntBASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRGV1A0A0A0MS02 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 TUB-203ENST00000534099 1759 ntTSL 2 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 AP006587.3-201ENST00000525742 1516 ntBASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRGV1A0A0A0MS02 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRGV1A0A0A0MS02 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms