Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 PMM2-212ENST00000566604 986 ntTSL 215.94■□□□□ 0.146e-6■□□□□ 8.9
DDX3XO00571 MKS1-210ENST00000581180 899 ntTSL 215.88■□□□□ 0.136e-6■□□□□ 8.9
DDX3XO00571 MKS1-211ENST00000581761 812 ntTSL 315.78■□□□□ 0.126e-6■□□□□ 8.9
DDX3XO00571 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.77■□□□□ 0.126e-6■□□□□ 8.9
DDX3XO00571 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.74■□□□□ 0.116e-6■□□□□ 8.9
DDX3XO00571 MKS1-203ENST00000393120 1926 ntTSL 215.56■□□□□ 0.086e-6■□□□□ 8.9
DDX3XO00571 PHF23-204ENST00000570899 649 ntTSL 315.31■□□□□ 0.046e-6■□□□□ 8.9
DDX3XO00571 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.25■□□□□ 0.036e-6■□□□□ 8.9
DDX3XO00571 MUTYH-212ENST00000461495 965 ntTSL 515.21■□□□□ 0.036e-6■□□□□ 8.9
DDX3XO00571 PMM2-203ENST00000562318 931 ntTSL 215.18■□□□□ 0.026e-6■□□□□ 8.9
DDX3XO00571 MUTYH-224ENST00000481139 1051 ntTSL 215.08■□□□□ 06e-6■□□□□ 8.9
DDX3XO00571 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.04■□□□□ -06e-6■□□□□ 8.9
DDX3XO00571 MKS1-207ENST00000578789 568 ntTSL 414.94□□□□□ -0.026e-6■□□□□ 8.9
DDX3XO00571 ATF6B-217ENST00000495579 1176 ntTSL 1 (best)14.33□□□□□ -0.124e-11■□□□□ 8.9
DDX3XO00571 PTPN7-215ENST00000492451 560 ntTSL 514.3□□□□□ -0.121e-6■□□□□ 8.9
DDX3XO00571 PTPN7-218ENST00000496197 1463 ntTSL 214.26□□□□□ -0.131e-6■□□□□ 8.9
DDX3XO00571 PTPN7-217ENST00000495688 2689 ntTSL 1 (best)14.22□□□□□ -0.131e-6■□□□□ 8.9
DDX3XO00571 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC14.21□□□□□ -0.136e-6■□□□□ 8.9
DDX3XO00571 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.174e-11■□□□□ 8.9
DDX3XO00571 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.174e-11■□□□□ 8.9
DDX3XO00571 THOC5-205ENST00000414902 484 ntTSL 513.87□□□□□ -0.196e-6■□□□□ 8.9
DDX3XO00571 MUTYH-217ENST00000467940 989 ntTSL 513.87□□□□□ -0.196e-6■□□□□ 8.9
DDX3XO00571 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.216e-13■□□□□ 8.9
DDX3XO00571 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC13.76□□□□□ -0.216e-6■□□□□ 8.9
DDX3XO00571 PTPN7-203ENST00000435759 575 ntTSL 413.71□□□□□ -0.211e-6■□□□□ 8.9
DDX3XO00571 MUTYH-233ENST00000525160 670 ntTSL 513.48□□□□□ -0.256e-6■□□□□ 8.9
DDX3XO00571 PTPN7-202ENST00000367279 3265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.261e-6■□□□□ 8.9
DDX3XO00571 PTPN7-212ENST00000480836 1189 ntTSL 213.34□□□□□ -0.271e-6■□□□□ 8.9
DDX3XO00571 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC13.22□□□□□ -0.296e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.36e-6■□□□□ 8.9
DDX3XO00571 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.36e-6■□□□□ 8.9
DDX3XO00571 PTPN7-205ENST00000464870 542 ntTSL 413.07□□□□□ -0.321e-6■□□□□ 8.9
DDX3XO00571 PTPN7-207ENST00000468385 1061 ntTSL 212.94□□□□□ -0.341e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.346e-6■□□□□ 8.9
DDX3XO00571 MUTYH-223ENST00000479746 971 ntTSL 312.88□□□□□ -0.356e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-204ENST00000356767 1404 ntTSL 1 (best) BASIC12.71□□□□□ -0.386e-6■□□□□ 8.9
DDX3XO00571 CAV2-214ENST00000495841 787 ntTSL 212.69□□□□□ -0.384e-11■□□□□ 8.9
DDX3XO00571 THOC5-207ENST00000428374 729 ntTSL 212.61□□□□□ -0.396e-6■□□□□ 8.9
DDX3XO00571 PTPN7-210ENST00000477625 673 ntTSL 512.53□□□□□ -0.41e-6■□□□□ 8.9
DDX3XO00571 SEC23IP-205ENST00000470478 285 ntTSL 212.48□□□□□ -0.416e-6■□□□□ 8.9
DDX3XO00571 PTPN7-214ENST00000491584 573 ntTSL 212.44□□□□□ -0.421e-6■□□□□ 8.9
DDX3XO00571 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.426e-6■□□□□ 8.9
DDX3XO00571 PTPN7-211ENST00000479092 545 ntTSL 512.39□□□□□ -0.431e-6■□□□□ 8.9
DDX3XO00571 CTDSP2-206ENST00000550144 544 ntTSL 412.32□□□□□ -0.446e-6■□□□□ 8.9
DDX3XO00571 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC12.24□□□□□ -0.456e-6■□□□□ 8.9
DDX3XO00571 ATF6B-212ENST00000468502 564 ntTSL 212.21□□□□□ -0.454e-11■□□□□ 8.9
DDX3XO00571 MUTYH-218ENST00000470256 839 ntTSL 312.2□□□□□ -0.466e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-211ENST00000432958 2588 ntTSL 5 BASIC12.18□□□□□ -0.466e-6■□□□□ 8.9
DDX3XO00571 PTPN7-219ENST00000629151 437 ntTSL 5 BASIC12.15□□□□□ -0.461e-6■□□□□ 8.9
DDX3XO00571 PTPN7-201ENST00000309017 3765 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.481e-6■□□□□ 8.9
DDX3XO00571 PMM2-216ENST00000569958 698 ntTSL 2 BASIC11.72□□□□□ -0.536e-6■□□□□ 8.9
DDX3XO00571 PMM2-207ENST00000565221 793 ntTSL 1 (best)11.7□□□□□ -0.546e-6■□□□□ 8.9
DDX3XO00571 MUTYH-221ENST00000476789 932 ntTSL 211.66□□□□□ -0.546e-6■□□□□ 8.9
DDX3XO00571 MYL6B-209ENST00000551834 562 ntTSL 411.59□□□□□ -0.556e-6■□□□□ 8.9
DDX3XO00571 PMM2-218ENST00000570134 573 ntTSL 511.58□□□□□ -0.566e-6■□□□□ 8.9
DDX3XO00571 MRPS18B-208ENST00000472267 1610 ntTSL 1 (best)11.57□□□□□ -0.564e-16■□□□□ 8.9
DDX3XO00571 THOC5-204ENST00000397873 2374 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.576e-6■□□□□ 8.9
DDX3XO00571 MRPS18B-206ENST00000259873 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.584e-16■□□□□ 8.9
DDX3XO00571 PTPN7-204ENST00000462815 1147 ntTSL 211.1□□□□□ -0.631e-6■□□□□ 8.9
DDX3XO00571 PTPN7-206ENST00000467283 577 ntTSL 411.1□□□□□ -0.631e-6■□□□□ 8.9
DDX3XO00571 PMM2-205ENST00000564030 1036 ntTSL 210.69□□□□□ -0.76e-6■□□□□ 8.9
DDX3XO00571 GTPBP4-205ENST00000491635 2220 ntTSL 210.66□□□□□ -0.76e-13■□□□□ 8.9
DDX3XO00571 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC10.66□□□□□ -0.76e-6■□□□□ 8.9
DDX3XO00571 THOC5-206ENST00000418021 738 ntTSL 310.62□□□□□ -0.716e-6■□□□□ 8.9
DDX3XO00571 PMM2-204ENST00000562448 583 ntTSL 210.33□□□□□ -0.766e-6■□□□□ 8.9
DDX3XO00571 PMM2-210ENST00000566196 531 ntTSL 410.05□□□□□ -0.86e-6■□□□□ 8.9
DDX3XO00571 PTPN7-208ENST00000476061 550 ntTSL 49.96□□□□□ -0.821e-6■□□□□ 8.9
DDX3XO00571 PMM2-213ENST00000566983 907 ntTSL 5 BASIC9.87□□□□□ -0.836e-6■□□□□ 8.9
DDX3XO00571 MRPS18B-209ENST00000492316 512 ntTSL 29.85□□□□□ -0.834e-16■□□□□ 8.9
DDX3XO00571 THOC5-209ENST00000442555 3012 ntTSL 29.79□□□□□ -0.846e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-212ENST00000445809 2324 ntTSL 29.47□□□□□ -0.896e-6■□□□□ 8.9
DDX3XO00571 MRPS18B-207ENST00000472229 1409 ntTSL 39.38□□□□□ -0.914e-16■□□□□ 8.9
DDX3XO00571 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC9.28□□□□□ -0.926e-6■□□□□ 8.9
DDX3XO00571 PTPN7-213ENST00000486116 551 ntTSL 49.09□□□□□ -0.951e-6■□□□□ 8.9
DDX3XO00571 RAB31-201ENST00000435762 518 ntTSL 39.06□□□□□ -0.966e-6■□□□□ 8.9
DDX3XO00571 PMM2-209ENST00000565896 514 ntTSL 48.92□□□□□ -0.986e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-213ENST00000454864 2242 ntTSL 28.74□□□□□ -1.016e-6■□□□□ 8.9
DDX3XO00571 RNMT-205ENST00000588457 1612 ntTSL 28.62□□□□□ -1.036e-6■□□□□ 8.9
DDX3XO00571 PMM2-217ENST00000570076 1002 ntTSL 28.62□□□□□ -1.036e-6■□□□□ 8.9
DDX3XO00571 THOC5-216ENST00000490103 4753 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.046e-6■□□□□ 8.9
DDX3XO00571 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.056e-6■□□□□ 8.9
DDX3XO00571 CENPH-202ENST00000502689 692 ntTSL 58.49□□□□□ -1.056e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.126e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-210ENST00000423416 2374 ntTSL 27.95□□□□□ -1.146e-6■□□□□ 8.9
DDX3XO00571 PMM2-215ENST00000568602 550 ntTSL 57.94□□□□□ -1.146e-6■□□□□ 8.9
DDX3XO00571 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC7.78□□□□□ -1.166e-6■□□□□ 8.9
DDX3XO00571 PMM2-206ENST00000564069 567 ntTSL 47.53□□□□□ -1.26e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-214ENST00000456463 2370 ntTSL 57.04□□□□□ -1.286e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.91□□□□□ -1.36e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.75□□□□□ -1.336e-6■□□□□ 8.9
DDX3XO00571 CTDSP2-208ENST00000552294 436 ntTSL 56.61□□□□□ -1.356e-6■□□□□ 8.9
DDX3XO00571 ZKSCAN1-203ENST00000432317 573 ntTSL 46.5□□□□□ -1.376e-6■□□□□ 8.9
DDX3XO00571 MUTYH-227ENST00000483127 788 ntTSL 56.44□□□□□ -1.386e-6■□□□□ 8.9
DDX3XO00571 MYB-233ENST00000531845 3230 ntTSL 25.78□□□□□ -1.484e-16■□□□□ 8.9
DDX3XO00571 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.496e-6■□□□□ 8.9
DDX3XO00571 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.56□□□□□ -1.526e-6■□□□□ 8.9
DDX3XO00571 RNMT-207ENST00000591746 572 ntTSL 35.4□□□□□ -1.546e-6■□□□□ 8.9
DDX3XO00571 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.556e-6■□□□□ 8.9
DDX3XO00571 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.24□□□□□ -1.576e-6■□□□□ 8.9
DDX3XO00571 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.636e-6■□□□□ 8.9
Retrieved 100 of 47,714 protein–RNA pairs in 3808.8 ms