RNA–Protein interactions for RNA: ENST00000492316.5

MRPS18B-209, Transcript of mitochondrial ribosomal protein S18B, humanhuman

TSL 2

Gene MRPS18B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18B-209ENST00000492316 NISCHQ9Y2I1 1504 aa23■■□□□ 1.27
MRPS18B-209ENST00000492316 CCDC180Q9P1Z9 1646 aa20.4■□□□□ 0.86
MRPS18B-209ENST00000492316 ABCC9O60706 1549 aa19.95■□□□□ 0.78
MRPS18B-209ENST00000492316 DCAF8L2P0C7V8 631 aa19.24■□□□□ 0.67
MRPS18B-209ENST00000492316 NACADO15069 1562 aa19.23■□□□□ 0.67
MRPS18B-209ENST00000492316 RB1CC1Q8TDY2 1594 aa19.23■□□□□ 0.67
MRPS18B-209ENST00000492316 MYO15BQ96JP2 1530 aa19.16■□□□□ 0.66
MRPS18B-209ENST00000492316 ZCCHC6Q5VYS8 1495 aaKnown RBP19.14■□□□□ 0.65
MRPS18B-209ENST00000492316 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
MRPS18B-209ENST00000492316 UNC13AQ9UPW8 1703 aa18.71■□□□□ 0.59
MRPS18B-209ENST00000492316 PABPN1Q86U42 306 aaKnown RBP eCLIP18.69■□□□□ 0.58
MRPS18B-209ENST00000492316 BICRAQ9NZM4 1560 aa18.62■□□□□ 0.57
MRPS18B-209ENST00000492316 SCRIBQ14160 1630 aa18.57■□□□□ 0.56
MRPS18B-209ENST00000492316 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
MRPS18B-209ENST00000492316 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
MRPS18B-209ENST00000492316 EIF4G1Q04637 1599 aaKnown RBP18.13■□□□□ 0.49
MRPS18B-209ENST00000492316 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
MRPS18B-209ENST00000492316 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
MRPS18B-209ENST00000492316 BAZ1AQ9NRL2 1556 aaPredicted RBP17.82■□□□□ 0.44
MRPS18B-209ENST00000492316 SMARCA4P51532 1647 aa17.8■□□□□ 0.44
MRPS18B-209ENST00000492316 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
MRPS18B-209ENST00000492316 ATAD2BQ9ULI0 1458 aa17.75■□□□□ 0.43
MRPS18B-209ENST00000492316 SMARCA2P51531 1590 aa17.73■□□□□ 0.43
MRPS18B-209ENST00000492316 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
MRPS18B-209ENST00000492316 PEG3Q9GZU2 1588 aa17.67■□□□□ 0.42
MRPS18B-209ENST00000492316 HMGXB3Q12766 1538 aa17.63■□□□□ 0.41
MRPS18B-209ENST00000492316 BAZ1BQ9UIG0 1483 aaKnown RBP17.58■□□□□ 0.41
MRPS18B-209ENST00000492316 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
MRPS18B-209ENST00000492316 WIZO95785 1651 aa17.48■□□□□ 0.39
MRPS18B-209ENST00000492316 TOP2AP11388 1531 aaKnown RBP17.31■□□□□ 0.36
MRPS18B-209ENST00000492316 CADPSQ9ULU8 1353 aa17.27■□□□□ 0.35
MRPS18B-209ENST00000492316 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
MRPS18B-209ENST00000492316 NESP48681 1621 aa17.25■□□□□ 0.35
MRPS18B-209ENST00000492316 ERCC6Q03468 1493 aa17.21■□□□□ 0.35
MRPS18B-209ENST00000492316 PDS5BQ9NTI5 1447 aa17.2■□□□□ 0.34
MRPS18B-209ENST00000492316 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
MRPS18B-209ENST00000492316 CFTRP13569 1480 aa17.14■□□□□ 0.33
MRPS18B-209ENST00000492316 SUPT5HO00267 1087 aaKnown RBP17.1■□□□□ 0.33
MRPS18B-209ENST00000492316 CUX2O14529 1486 aa17.06■□□□□ 0.32
MRPS18B-209ENST00000492316 KIF21AQ7Z4S6 1674 aa17.01■□□□□ 0.31
MRPS18B-209ENST00000492316 FANCD2Q9BXW9 1451 aa17.01■□□□□ 0.31
MRPS18B-209ENST00000492316 CEP164Q9UPV0 1460 aa16.98■□□□□ 0.31
MRPS18B-209ENST00000492316 THOC2Q8NI27 1593 aaKnown RBP16.98■□□□□ 0.31
MRPS18B-209ENST00000492316 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
MRPS18B-209ENST00000492316 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
MRPS18B-209ENST00000492316 WDR62O43379 1518 aa16.89■□□□□ 0.29
MRPS18B-209ENST00000492316 URB2Q14146 1524 aaKnown RBP16.82■□□□□ 0.28
MRPS18B-209ENST00000492316 ABCC8Q09428 1581 aa16.81■□□□□ 0.28
MRPS18B-209ENST00000492316 TOPBP1Q92547 1522 aa16.73■□□□□ 0.27
MRPS18B-209ENST00000492316 DNMBPQ6XZF7 1577 aa16.71■□□□□ 0.27
MRPS18B-209ENST00000492316 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
MRPS18B-209ENST00000492316 POLA1P09884 1462 aaPredicted RBP16.6■□□□□ 0.25
MRPS18B-209ENST00000492316 CUX1P39880 1505 aa16.6■□□□□ 0.25
MRPS18B-209ENST00000492316 DNAJC5Q9H3Z4 198 aa16.58■□□□□ 0.24
MRPS18B-209ENST00000492316 SOGA1O94964 1423 aa16.57■□□□□ 0.24
MRPS18B-209ENST00000492316 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
MRPS18B-209ENST00000492316 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
MRPS18B-209ENST00000492316 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
MRPS18B-209ENST00000492316 WRNQ14191 1432 aaPredicted RBP eCLIP16.53■□□□□ 0.24
MRPS18B-209ENST00000492316 RAD54L2Q9Y4B4 1467 aa16.51■□□□□ 0.23
MRPS18B-209ENST00000492316 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
MRPS18B-209ENST00000492316 AQRO60306 1485 aaKnown RBP eCLIP16.47■□□□□ 0.234e-8■■■■■ 38.5
MRPS18B-209ENST00000492316 TDRD9Q8NDG6 1382 aaKnown RBP16.45■□□□□ 0.22
MRPS18B-209ENST00000492316 WDR97A6NE52 1622 aa16.45■□□□□ 0.22
MRPS18B-209ENST00000492316 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
MRPS18B-209ENST00000492316 SYNJ1O43426 1573 aa16.43■□□□□ 0.22
MRPS18B-209ENST00000492316 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
MRPS18B-209ENST00000492316 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
MRPS18B-209ENST00000492316 OSCARQ8IYS5 282 aa16.42■□□□□ 0.22
MRPS18B-209ENST00000492316 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
MRPS18B-209ENST00000492316 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
MRPS18B-209ENST00000492316 MAGI1Q96QZ7 1491 aaPredicted RBP16.31■□□□□ 0.2
MRPS18B-209ENST00000492316 ABCA5Q8WWZ7 1642 aa16.3■□□□□ 0.2
MRPS18B-209ENST00000492316 FBLN2P98095 1184 aa16.29■□□□□ 0.2
MRPS18B-209ENST00000492316 SNAPC4Q5SXM2 1469 aa16.29■□□□□ 0.2
MRPS18B-209ENST00000492316 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
MRPS18B-209ENST00000492316 SYNJ2O15056 1496 aa16.24■□□□□ 0.19
MRPS18B-209ENST00000492316 PBRM1Q86U86 1689 aa16.24■□□□□ 0.19
MRPS18B-209ENST00000492316 ERICH3Q5RHP9 1530 aa16.22■□□□□ 0.19
MRPS18B-209ENST00000492316 KIF27Q86VH2 1401 aa16.21■□□□□ 0.19
MRPS18B-209ENST00000492316 CHD1O14646 1710 aa16.21■□□□□ 0.19
MRPS18B-209ENST00000492316 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
MRPS18B-209ENST00000492316 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
MRPS18B-209ENST00000492316 IGF1RP08069 1367 aa16.17■□□□□ 0.18
MRPS18B-209ENST00000492316 ADAMTS12P58397 1594 aa16.13■□□□□ 0.17
MRPS18B-209ENST00000492316 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
MRPS18B-209ENST00000492316 CLASP1Q7Z460 1538 aa16.09■□□□□ 0.17
MRPS18B-209ENST00000492316 NUP160Q12769 1436 aa16.08■□□□□ 0.16
MRPS18B-209ENST00000492316 CARMIL1Q5VZK9 1371 aa16.06■□□□□ 0.16
MRPS18B-209ENST00000492316 ARHGEF11O15085 1522 aa16.05■□□□□ 0.16
MRPS18B-209ENST00000492316 CUL7Q14999 1698 aa16.04■□□□□ 0.16
MRPS18B-209ENST00000492316 RIMBP3CA6NJZ7 1639 aa16.02■□□□□ 0.16
MRPS18B-209ENST00000492316 RIMBP3BA6NNM3 1639 aa16.02■□□□□ 0.16
MRPS18B-209ENST00000492316 RIMBP3Q9UFD9 1639 aa16.02■□□□□ 0.16
MRPS18B-209ENST00000492316 CEP170Q5SW79 1584 aa16■□□□□ 0.15
MRPS18B-209ENST00000492316 RUSC2Q8N2Y8 1516 aa16■□□□□ 0.15
MRPS18B-209ENST00000492316 CHIC1Q5VXU3 224 aa16■□□□□ 0.15
MRPS18B-209ENST00000492316 JPH4Q96JJ6 628 aa15.98■□□□□ 0.15
MRPS18B-209ENST00000492316 CYB5RLQ6IPT4 315 aa15.97■□□□□ 0.15
MRPS18B-209ENST00000492316 KIAA0586Q9BVV6 1533 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms