RNA–Protein interactions for RNA: ENST00000432317.1

ZKSCAN1-203, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 4

Gene ZKSCAN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-203ENST00000432317 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
ZKSCAN1-203ENST00000432317 AEBP2Q6ZN18 517 aaPredicted RBP20.28■□□□□ 0.84
ZKSCAN1-203ENST00000432317 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
ZKSCAN1-203ENST00000432317 SENP3Q9H4L4 574 aaPredicted RBP17.21■□□□□ 0.35
ZKSCAN1-203ENST00000432317 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
ZKSCAN1-203ENST00000432317 NISCHQ9Y2I1 1504 aa16.92■□□□□ 0.3
ZKSCAN1-203ENST00000432317 FOXD1Q16676 465 aa15.82■□□□□ 0.12
ZKSCAN1-203ENST00000432317 ADRA2BP18089 450 aa15.8■□□□□ 0.12
ZKSCAN1-203ENST00000432317 ABCC9O60706 1549 aa15.78■□□□□ 0.12
ZKSCAN1-203ENST00000432317 PPP6R1Q9UPN7 881 aa15.71■□□□□ 0.11
ZKSCAN1-203ENST00000432317 CCDC180Q9P1Z9 1646 aa15.43■□□□□ 0.06
ZKSCAN1-203ENST00000432317 KCNA4P22459 653 aa15.4■□□□□ 0.06
ZKSCAN1-203ENST00000432317 PIAS4Q8N2W9 510 aaPredicted RBP15.12■□□□□ 0.01
ZKSCAN1-203ENST00000432317 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
ZKSCAN1-203ENST00000432317 DNAJC5BQ9UF47 199 aa15.11■□□□□ 0.01
ZKSCAN1-203ENST00000432317 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
ZKSCAN1-203ENST00000432317 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
ZKSCAN1-203ENST00000432317 NCBP3Q53F19 620 aaKnown RBP14.9□□□□□ -0.02
ZKSCAN1-203ENST00000432317 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
ZKSCAN1-203ENST00000432317 NACADO15069 1562 aa14.77□□□□□ -0.05
ZKSCAN1-203ENST00000432317 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
ZKSCAN1-203ENST00000432317 PABPN1Q86U42 306 aaKnown RBP eCLIP14.62□□□□□ -0.07
ZKSCAN1-203ENST00000432317 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
ZKSCAN1-203ENST00000432317 DCAF8L2P0C7V8 631 aa14.59□□□□□ -0.07
ZKSCAN1-203ENST00000432317 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
ZKSCAN1-203ENST00000432317 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
ZKSCAN1-203ENST00000432317 DNAJC5Q9H3Z4 198 aa14.47□□□□□ -0.09
ZKSCAN1-203ENST00000432317 MYO15BQ96JP2 1530 aa14.46□□□□□ -0.1
ZKSCAN1-203ENST00000432317 MSH5O43196 834 aa14.41□□□□□ -0.1
ZKSCAN1-203ENST00000432317 SHROOM4Q9ULL8 1493 aa14.41□□□□□ -0.1
ZKSCAN1-203ENST00000432317 UNC13AQ9UPW8 1703 aa14.38□□□□□ -0.11
ZKSCAN1-203ENST00000432317 CECR2Q9BXF3 1484 aa14.34□□□□□ -0.11
ZKSCAN1-203ENST00000432317 BICRAQ9NZM4 1560 aa14.33□□□□□ -0.12
ZKSCAN1-203ENST00000432317 CC2D2AQ9P2K1 1620 aa14.23□□□□□ -0.13
ZKSCAN1-203ENST00000432317 ZBTB22O15209 634 aa14.14□□□□□ -0.15
ZKSCAN1-203ENST00000432317 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
ZKSCAN1-203ENST00000432317 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
ZKSCAN1-203ENST00000432317 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
ZKSCAN1-203ENST00000432317 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
ZKSCAN1-203ENST00000432317 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
ZKSCAN1-203ENST00000432317 CUX2O14529 1486 aa13.96□□□□□ -0.17
ZKSCAN1-203ENST00000432317 SCRIBQ14160 1630 aa13.92□□□□□ -0.18
ZKSCAN1-203ENST00000432317 ZCCHC6Q5VYS8 1495 aaKnown RBP13.88□□□□□ -0.19
ZKSCAN1-203ENST00000432317 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
ZKSCAN1-203ENST00000432317 ERCC6Q03468 1493 aa13.81□□□□□ -0.2
ZKSCAN1-203ENST00000432317 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
ZKSCAN1-203ENST00000432317 NCAPD3P42695 1498 aa13.61□□□□□ -0.23
ZKSCAN1-203ENST00000432317 SLC4A2P04920 1241 aa13.6□□□□□ -0.23
ZKSCAN1-203ENST00000432317 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
ZKSCAN1-203ENST00000432317 ATXN8OSP0DMR3 200 aa13.54□□□□□ -0.24
ZKSCAN1-203ENST00000432317 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
ZKSCAN1-203ENST00000432317 SMARCA2P51531 1590 aa13.48□□□□□ -0.25
ZKSCAN1-203ENST00000432317 HMGXB3Q12766 1538 aa13.44□□□□□ -0.26
ZKSCAN1-203ENST00000432317 ATAD2BQ9ULI0 1458 aa13.42□□□□□ -0.26
ZKSCAN1-203ENST00000432317 PDS5BQ9NTI5 1447 aa13.42□□□□□ -0.26
ZKSCAN1-203ENST00000432317 LAMC3Q9Y6N6 1575 aa13.4□□□□□ -0.26
ZKSCAN1-203ENST00000432317 NESP48681 1621 aa13.34□□□□□ -0.27
ZKSCAN1-203ENST00000432317 THOC2Q8NI27 1593 aaKnown RBP13.33□□□□□ -0.28
ZKSCAN1-203ENST00000432317 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
ZKSCAN1-203ENST00000432317 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.28
ZKSCAN1-203ENST00000432317 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
ZKSCAN1-203ENST00000432317 SMARCA4P51532 1647 aa13.26□□□□□ -0.29
ZKSCAN1-203ENST00000432317 BAZ1AQ9NRL2 1556 aaPredicted RBP13.24□□□□□ -0.29
ZKSCAN1-203ENST00000432317 FKBP8Q14318 412 aa13.22□□□□□ -0.29
ZKSCAN1-203ENST00000432317 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
ZKSCAN1-203ENST00000432317 PEG3Q9GZU2 1588 aa13.2□□□□□ -0.3
ZKSCAN1-203ENST00000432317 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
ZKSCAN1-203ENST00000432317 KIF21AQ7Z4S6 1674 aa13.18□□□□□ -0.3
ZKSCAN1-203ENST00000432317 RTN4Q9NQC3 1192 aaKnown RBP13.17□□□□□ -0.3
ZKSCAN1-203ENST00000432317 DCAF8L1A6NGE4 600 aa13.16□□□□□ -0.3
ZKSCAN1-203ENST00000432317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.16□□□□□ -0.3
ZKSCAN1-203ENST00000432317 HNRNPUL2Q1KMD3 747 aaKnown RBP13.16□□□□□ -0.3
ZKSCAN1-203ENST00000432317 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.15□□□□□ -0.31e-10■■□□□ 11.6
ZKSCAN1-203ENST00000432317 WDR62O43379 1518 aa13.13□□□□□ -0.31
ZKSCAN1-203ENST00000432317 SAMD1Q6SPF0 538 aaPredicted RBP13.11□□□□□ -0.31
ZKSCAN1-203ENST00000432317 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
ZKSCAN1-203ENST00000432317 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
ZKSCAN1-203ENST00000432317 TRHP20396 242 aaPredicted RBP13.03□□□□□ -0.32
ZKSCAN1-203ENST00000432317 ATF5Q9Y2D1 282 aaPredicted RBP13.01□□□□□ -0.33
ZKSCAN1-203ENST00000432317 POTEDQ86YR6 584 aa13□□□□□ -0.33
ZKSCAN1-203ENST00000432317 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
ZKSCAN1-203ENST00000432317 FANCD2Q9BXW9 1451 aa12.98□□□□□ -0.33
ZKSCAN1-203ENST00000432317 RIMBP3CA6NJZ7 1639 aa12.96□□□□□ -0.33
ZKSCAN1-203ENST00000432317 RIMBP3BA6NNM3 1639 aa12.96□□□□□ -0.33
ZKSCAN1-203ENST00000432317 RIMBP3Q9UFD9 1639 aa12.96□□□□□ -0.33
ZKSCAN1-203ENST00000432317 CYB5RLQ6IPT4 315 aa12.94□□□□□ -0.34
ZKSCAN1-203ENST00000432317 MROH2BQ7Z745 1585 aa12.94□□□□□ -0.34
ZKSCAN1-203ENST00000432317 ARHGEF11O15085 1522 aa12.92□□□□□ -0.34
ZKSCAN1-203ENST00000432317 CFTRP13569 1480 aa12.9□□□□□ -0.34
ZKSCAN1-203ENST00000432317 APLP2Q06481 763 aa12.88□□□□□ -0.35
ZKSCAN1-203ENST00000432317 IFT140Q96RY7 1462 aa12.86□□□□□ -0.35
ZKSCAN1-203ENST00000432317 ABCC8Q09428 1581 aa12.82□□□□□ -0.36
ZKSCAN1-203ENST00000432317 RSF1Q96T23 1441 aaPredicted RBP12.81□□□□□ -0.36
ZKSCAN1-203ENST00000432317 URB2Q14146 1524 aaKnown RBP12.8□□□□□ -0.36
ZKSCAN1-203ENST00000432317 ZNF219Q9P2Y4 722 aaPredicted RBP12.8□□□□□ -0.36
ZKSCAN1-203ENST00000432317 WIZO95785 1651 aa12.74□□□□□ -0.37
ZKSCAN1-203ENST00000432317 FBLN2P98095 1184 aa12.74□□□□□ -0.37
ZKSCAN1-203ENST00000432317 ARAP1Q96P48 1450 aa12.71□□□□□ -0.38
ZKSCAN1-203ENST00000432317 ZNF608Q9ULD9 1512 aaPredicted RBP12.69□□□□□ -0.38
ZKSCAN1-203ENST00000432317 PRDM2Q13029 1718 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms