RNA–Protein interactions for RNA: ENST00000565896.5

PMM2-209, Transcript of phosphomannomutase 2, humanhuman

TSL 4

Gene PMM2, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-209ENST00000565896 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
PMM2-209ENST00000565896 ABCC9O60706 1549 aa20.91■□□□□ 0.94
PMM2-209ENST00000565896 CCDC180Q9P1Z9 1646 aa20.87■□□□□ 0.93
PMM2-209ENST00000565896 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
PMM2-209ENST00000565896 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
PMM2-209ENST00000565896 NACADO15069 1562 aa19.75■□□□□ 0.75
PMM2-209ENST00000565896 MYO15BQ96JP2 1530 aa19.51■□□□□ 0.71
PMM2-209ENST00000565896 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
PMM2-209ENST00000565896 PABPN1Q86U42 306 aaKnown RBP eCLIP19.43■□□□□ 0.7
PMM2-209ENST00000565896 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
PMM2-209ENST00000565896 DCAF8L2P0C7V8 631 aa19.38■□□□□ 0.69
PMM2-209ENST00000565896 ZCCHC6Q5VYS8 1495 aaKnown RBP19.2■□□□□ 0.66
PMM2-209ENST00000565896 DCAF1Q9Y4B6 1507 aa19.2■□□□□ 0.66
PMM2-209ENST00000565896 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
PMM2-209ENST00000565896 CC2D2AQ9P2K1 1620 aa18.94■□□□□ 0.62
PMM2-209ENST00000565896 SCRIBQ14160 1630 aa18.92■□□□□ 0.62
PMM2-209ENST00000565896 CECR2Q9BXF3 1484 aa18.88■□□□□ 0.61
PMM2-209ENST00000565896 EIF4G1Q04637 1599 aaKnown RBP18.88■□□□□ 0.61
PMM2-209ENST00000565896 DNAJC5Q9H3Z4 198 aa18.29■□□□□ 0.52
PMM2-209ENST00000565896 NCAPD3P42695 1498 aa18.27■□□□□ 0.52
PMM2-209ENST00000565896 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
PMM2-209ENST00000565896 CUX2O14529 1486 aa18.14■□□□□ 0.5
PMM2-209ENST00000565896 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
PMM2-209ENST00000565896 HMGXB3Q12766 1538 aa18.1■□□□□ 0.49
PMM2-209ENST00000565896 SMARCA2P51531 1590 aa18.07■□□□□ 0.48
PMM2-209ENST00000565896 ERCC6Q03468 1493 aa18.01■□□□□ 0.47
PMM2-209ENST00000565896 PEG3Q9GZU2 1588 aa18■□□□□ 0.47
PMM2-209ENST00000565896 NESP48681 1621 aa17.97■□□□□ 0.47
PMM2-209ENST00000565896 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.47
PMM2-209ENST00000565896 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
PMM2-209ENST00000565896 THOC2Q8NI27 1593 aaKnown RBP17.87■□□□□ 0.45
PMM2-209ENST00000565896 MROH2BQ7Z745 1585 aa17.85■□□□□ 0.45
PMM2-209ENST00000565896 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.44
PMM2-209ENST00000565896 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
PMM2-209ENST00000565896 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
PMM2-209ENST00000565896 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
PMM2-209ENST00000565896 WIZO95785 1651 aa17.61■□□□□ 0.41
PMM2-209ENST00000565896 WDR62O43379 1518 aa17.58■□□□□ 0.41
PMM2-209ENST00000565896 MRC2Q9UBG0 1479 aa17.56■□□□□ 0.4
PMM2-209ENST00000565896 CFTRP13569 1480 aa17.46■□□□□ 0.39
PMM2-209ENST00000565896 CEP164Q9UPV0 1460 aa17.44■□□□□ 0.38
PMM2-209ENST00000565896 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
PMM2-209ENST00000565896 FANCD2Q9BXW9 1451 aa17.43■□□□□ 0.38
PMM2-209ENST00000565896 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
PMM2-209ENST00000565896 URB2Q14146 1524 aaKnown RBP17.34■□□□□ 0.37
PMM2-209ENST00000565896 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
PMM2-209ENST00000565896 TRIM41Q8WV44 630 aa17.26■□□□□ 0.35
PMM2-209ENST00000565896 OSCARQ8IYS5 282 aa17.22■□□□□ 0.35
PMM2-209ENST00000565896 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
PMM2-209ENST00000565896 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
PMM2-209ENST00000565896 ZNF608Q9ULD9 1512 aaPredicted RBP17.13■□□□□ 0.33
PMM2-209ENST00000565896 TOPBP1Q92547 1522 aa17.11■□□□□ 0.33
PMM2-209ENST00000565896 RIMBP3CA6NJZ7 1639 aa17.07■□□□□ 0.32
PMM2-209ENST00000565896 RIMBP3BA6NNM3 1639 aa17.07■□□□□ 0.32
PMM2-209ENST00000565896 RIMBP3Q9UFD9 1639 aa17.07■□□□□ 0.32
PMM2-209ENST00000565896 ABCC8Q09428 1581 aa17.04■□□□□ 0.32
PMM2-209ENST00000565896 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
PMM2-209ENST00000565896 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.31
PMM2-209ENST00000565896 EIF4G3O43432 1585 aaKnown RBP17.02■□□□□ 0.31
PMM2-209ENST00000565896 ARHGEF11O15085 1522 aa17■□□□□ 0.31
PMM2-209ENST00000565896 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.32e-8■■■□□ 16.2
PMM2-209ENST00000565896 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
PMM2-209ENST00000565896 CHD1O14646 1710 aa16.91■□□□□ 0.3
PMM2-209ENST00000565896 RAD54L2Q9Y4B4 1467 aa16.85■□□□□ 0.29
PMM2-209ENST00000565896 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
PMM2-209ENST00000565896 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
PMM2-209ENST00000565896 SOGA1O94964 1423 aa16.8■□□□□ 0.28
PMM2-209ENST00000565896 CYB5RLQ6IPT4 315 aa16.79■□□□□ 0.28
PMM2-209ENST00000565896 TDRD9Q8NDG6 1382 aaKnown RBP16.78■□□□□ 0.28
PMM2-209ENST00000565896 CUX1P39880 1505 aa16.78■□□□□ 0.28
PMM2-209ENST00000565896 CLASP1Q7Z460 1538 aa16.78■□□□□ 0.28
PMM2-209ENST00000565896 FGD5Q6ZNL6 1462 aa16.78■□□□□ 0.28
PMM2-209ENST00000565896 SNAPC4Q5SXM2 1469 aa16.74■□□□□ 0.27
PMM2-209ENST00000565896 MAGI1Q96QZ7 1491 aaPredicted RBP16.72■□□□□ 0.27
PMM2-209ENST00000565896 FBLN2P98095 1184 aa16.7■□□□□ 0.26
PMM2-209ENST00000565896 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
PMM2-209ENST00000565896 SYNJ2O15056 1496 aa16.67■□□□□ 0.26
PMM2-209ENST00000565896 SYNJ1O43426 1573 aa16.66■□□□□ 0.26
PMM2-209ENST00000565896 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
PMM2-209ENST00000565896 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
PMM2-209ENST00000565896 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
PMM2-209ENST00000565896 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
PMM2-209ENST00000565896 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
PMM2-209ENST00000565896 TRHP20396 242 aaPredicted RBP16.56■□□□□ 0.24
PMM2-209ENST00000565896 NUP160Q12769 1436 aa16.49■□□□□ 0.23
PMM2-209ENST00000565896 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
PMM2-209ENST00000565896 GRIN2AQ12879 1464 aa16.48■□□□□ 0.23
PMM2-209ENST00000565896 ADAMTS12P58397 1594 aa16.48■□□□□ 0.23
PMM2-209ENST00000565896 ERCC6L2Q5T890 1561 aa16.48■□□□□ 0.23
PMM2-209ENST00000565896 TOP2BQ02880 1626 aa16.47■□□□□ 0.23
PMM2-209ENST00000565896 CEP170Q5SW79 1584 aa16.46■□□□□ 0.23
PMM2-209ENST00000565896 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
PMM2-209ENST00000565896 SHROOM2Q13796 1616 aa16.45■□□□□ 0.22
PMM2-209ENST00000565896 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
PMM2-209ENST00000565896 ERICH3Q5RHP9 1530 aa16.4■□□□□ 0.22
PMM2-209ENST00000565896 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
PMM2-209ENST00000565896 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
PMM2-209ENST00000565896 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
PMM2-209ENST00000565896 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
PMM2-209ENST00000565896 JPH4Q96JJ6 628 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms