RNA–Protein interactions for RNA: ENST00000259873.4

MRPS18B-206, Transcript of mitochondrial ribosomal protein S18B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS18B, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18B-206ENST00000259873 NISCHQ9Y2I1 1504 aa24.77■■□□□ 1.56
MRPS18B-206ENST00000259873 CCDC180Q9P1Z9 1646 aa21.67■■□□□ 1.06
MRPS18B-206ENST00000259873 ZCCHC6Q5VYS8 1495 aaKnown RBP20.78■□□□□ 0.92
MRPS18B-206ENST00000259873 ABCC9O60706 1549 aa20.77■□□□□ 0.92
MRPS18B-206ENST00000259873 DCAF8L2P0C7V8 631 aa20.53■□□□□ 0.88
MRPS18B-206ENST00000259873 DCAF1Q9Y4B6 1507 aa20.47■□□□□ 0.87
MRPS18B-206ENST00000259873 MYO15BQ96JP2 1530 aa20.32■□□□□ 0.84
MRPS18B-206ENST00000259873 NACADO15069 1562 aa20.26■□□□□ 0.83
MRPS18B-206ENST00000259873 RB1CC1Q8TDY2 1594 aa20.15■□□□□ 0.82
MRPS18B-206ENST00000259873 SHROOM4Q9ULL8 1493 aa20.06■□□□□ 0.8
MRPS18B-206ENST00000259873 SCRIBQ14160 1630 aa19.94■□□□□ 0.78
MRPS18B-206ENST00000259873 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
MRPS18B-206ENST00000259873 BICRAQ9NZM4 1560 aa19.57■□□□□ 0.72
MRPS18B-206ENST00000259873 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.72
MRPS18B-206ENST00000259873 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
MRPS18B-206ENST00000259873 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
MRPS18B-206ENST00000259873 MROH2BQ7Z745 1585 aa19.14■□□□□ 0.65
MRPS18B-206ENST00000259873 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.65
MRPS18B-206ENST00000259873 BAZ1AQ9NRL2 1556 aaPredicted RBP19.13■□□□□ 0.65
MRPS18B-206ENST00000259873 SMARCA4P51532 1647 aa19.08■□□□□ 0.65
MRPS18B-206ENST00000259873 EIF4G1Q04637 1599 aaKnown RBP18.99■□□□□ 0.63
MRPS18B-206ENST00000259873 WIZO95785 1651 aa18.94■□□□□ 0.62
MRPS18B-206ENST00000259873 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
MRPS18B-206ENST00000259873 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
MRPS18B-206ENST00000259873 SMARCA2P51531 1590 aa18.81■□□□□ 0.6
MRPS18B-206ENST00000259873 CC2D2AQ9P2K1 1620 aa18.77■□□□□ 0.59
MRPS18B-206ENST00000259873 TOP2AP11388 1531 aaKnown RBP18.76■□□□□ 0.59
MRPS18B-206ENST00000259873 NCAPD3P42695 1498 aa18.73■□□□□ 0.59
MRPS18B-206ENST00000259873 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
MRPS18B-206ENST00000259873 HMGXB3Q12766 1538 aa18.67■□□□□ 0.58
MRPS18B-206ENST00000259873 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
MRPS18B-206ENST00000259873 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
MRPS18B-206ENST00000259873 CFTRP13569 1480 aa18.24■□□□□ 0.51
MRPS18B-206ENST00000259873 CADPSQ9ULU8 1353 aa18.23■□□□□ 0.51
MRPS18B-206ENST00000259873 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
MRPS18B-206ENST00000259873 NESP48681 1621 aa18.16■□□□□ 0.5
MRPS18B-206ENST00000259873 LAMC3Q9Y6N6 1575 aa18.1■□□□□ 0.49
MRPS18B-206ENST00000259873 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
MRPS18B-206ENST00000259873 PRDM2Q13029 1718 aa18.06■□□□□ 0.48
MRPS18B-206ENST00000259873 FANCD2Q9BXW9 1451 aa18.03■□□□□ 0.48
MRPS18B-206ENST00000259873 TRIM41Q8WV44 630 aa18.02■□□□□ 0.47
MRPS18B-206ENST00000259873 WRNQ14191 1432 aaPredicted RBP eCLIP18.01■□□□□ 0.47
MRPS18B-206ENST00000259873 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
MRPS18B-206ENST00000259873 SYNJ1O43426 1573 aa17.94■□□□□ 0.46
MRPS18B-206ENST00000259873 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
MRPS18B-206ENST00000259873 CUX1P39880 1505 aa17.91■□□□□ 0.46
MRPS18B-206ENST00000259873 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
MRPS18B-206ENST00000259873 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
MRPS18B-206ENST00000259873 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
MRPS18B-206ENST00000259873 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.45
MRPS18B-206ENST00000259873 ERCC6Q03468 1493 aa17.83■□□□□ 0.44
MRPS18B-206ENST00000259873 DNMBPQ6XZF7 1577 aa17.81■□□□□ 0.44
MRPS18B-206ENST00000259873 TOPBP1Q92547 1522 aa17.81■□□□□ 0.44
MRPS18B-206ENST00000259873 MRC2Q9UBG0 1479 aa17.79■□□□□ 0.44
MRPS18B-206ENST00000259873 FGD5Q6ZNL6 1462 aa17.76■□□□□ 0.43
MRPS18B-206ENST00000259873 SOGA1O94964 1423 aa17.72■□□□□ 0.43
MRPS18B-206ENST00000259873 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
MRPS18B-206ENST00000259873 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
MRPS18B-206ENST00000259873 WDR62O43379 1518 aa17.7■□□□□ 0.42
MRPS18B-206ENST00000259873 THOC2Q8NI27 1593 aaKnown RBP17.7■□□□□ 0.42
MRPS18B-206ENST00000259873 RUSC2Q8N2Y8 1516 aa17.66■□□□□ 0.42
MRPS18B-206ENST00000259873 RAD54L2Q9Y4B4 1467 aa17.66■□□□□ 0.42
MRPS18B-206ENST00000259873 EEA1Q15075 1411 aa17.6■□□□□ 0.41
MRPS18B-206ENST00000259873 CUX2O14529 1486 aa17.6■□□□□ 0.41
MRPS18B-206ENST00000259873 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
MRPS18B-206ENST00000259873 KIF27Q86VH2 1401 aa17.57■□□□□ 0.4
MRPS18B-206ENST00000259873 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
MRPS18B-206ENST00000259873 CSRNP3Q8WYN3 585 aa17.54■□□□□ 0.4
MRPS18B-206ENST00000259873 IFT140Q96RY7 1462 aa17.53■□□□□ 0.4
MRPS18B-206ENST00000259873 WDR97A6NE52 1622 aa17.53■□□□□ 0.4
MRPS18B-206ENST00000259873 LOC105371045A0A1W2PR82 267 aa17.51■□□□□ 0.39
MRPS18B-206ENST00000259873 TDRD9Q8NDG6 1382 aaKnown RBP17.51■□□□□ 0.39
MRPS18B-206ENST00000259873 EHMT2Q96KQ7 1210 aa17.47■□□□□ 0.39
MRPS18B-206ENST00000259873 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.38
MRPS18B-206ENST00000259873 ZNF608Q9ULD9 1512 aaPredicted RBP17.45■□□□□ 0.38
MRPS18B-206ENST00000259873 IGF1RP08069 1367 aa17.45■□□□□ 0.38
MRPS18B-206ENST00000259873 AQRO60306 1485 aaKnown RBP eCLIP17.43■□□□□ 0.384e-8■■■■■ 38.5
MRPS18B-206ENST00000259873 GAPVD1Q14C86 1478 aa17.43■□□□□ 0.38
MRPS18B-206ENST00000259873 PRXQ9BXM0 1461 aa17.4■□□□□ 0.38
MRPS18B-206ENST00000259873 KIF21BO75037 1637 aa17.38■□□□□ 0.37
MRPS18B-206ENST00000259873 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
MRPS18B-206ENST00000259873 GOLGA3Q08378 1498 aa17.37■□□□□ 0.37
MRPS18B-206ENST00000259873 RAPGEF2Q9Y4G8 1499 aa17.37■□□□□ 0.37
MRPS18B-206ENST00000259873 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
MRPS18B-206ENST00000259873 CARMIL1Q5VZK9 1371 aa17.36■□□□□ 0.37
MRPS18B-206ENST00000259873 GRIN2BQ13224 1484 aa17.34■□□□□ 0.37
MRPS18B-206ENST00000259873 PBRM1Q86U86 1689 aa17.32■□□□□ 0.36
MRPS18B-206ENST00000259873 CUL7Q14999 1698 aa17.3■□□□□ 0.36
MRPS18B-206ENST00000259873 UBTFP17480 764 aaKnown RBP17.29■□□□□ 0.36
MRPS18B-206ENST00000259873 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.36
MRPS18B-206ENST00000259873 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.35
MRPS18B-206ENST00000259873 ADAMTS12P58397 1594 aa17.26■□□□□ 0.35
MRPS18B-206ENST00000259873 FHAD1B1AJZ9 1412 aa17.25■□□□□ 0.35
MRPS18B-206ENST00000259873 MAGI1Q96QZ7 1491 aaPredicted RBP17.21■□□□□ 0.35
MRPS18B-206ENST00000259873 CEP162Q5TB80 1403 aa17.16■□□□□ 0.34
MRPS18B-206ENST00000259873 SYNJ2O15056 1496 aa17.16■□□□□ 0.34
MRPS18B-206ENST00000259873 GRIN2AQ12879 1464 aa17.14■□□□□ 0.33
MRPS18B-206ENST00000259873 CHMP7Q8WUX9 453 aaPredicted RBP17.12■□□□□ 0.33
MRPS18B-206ENST00000259873 FBLN2P98095 1184 aa17.11■□□□□ 0.33
MRPS18B-206ENST00000259873 RANGAP1P46060 587 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms