RNA–Protein interactions for RNA: ENST00000470478.1

SEC23IP-205, Transcript of SEC23 interacting protein, humanhuman

TSL 2

Gene SEC23IP, Length 285 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-205ENST00000470478 NISCHQ9Y2I1 1504 aa31.66■■■□□ 2.66
SEC23IP-205ENST00000470478 ABCC9O60706 1549 aa28.46■■■□□ 2.15
SEC23IP-205ENST00000470478 CCDC180Q9P1Z9 1646 aa28.45■■■□□ 2.14
SEC23IP-205ENST00000470478 RB1CC1Q8TDY2 1594 aa27.05■■□□□ 1.92
SEC23IP-205ENST00000470478 NACADO15069 1562 aa26.86■■□□□ 1.89
SEC23IP-205ENST00000470478 DNAJC5BQ9UF47 199 aa26.74■■□□□ 1.87
SEC23IP-205ENST00000470478 DCAF8L2P0C7V8 631 aa26.6■■□□□ 1.85
SEC23IP-205ENST00000470478 UNC13AQ9UPW8 1703 aa26.57■■□□□ 1.84
SEC23IP-205ENST00000470478 MYO15BQ96JP2 1530 aa26.48■■□□□ 1.83
SEC23IP-205ENST00000470478 PABPN1Q86U42 306 aaKnown RBP eCLIP26.45■■□□□ 1.82
SEC23IP-205ENST00000470478 BICRAQ9NZM4 1560 aa26.36■■□□□ 1.81
SEC23IP-205ENST00000470478 ZCCHC6Q5VYS8 1495 aaKnown RBP26.26■■□□□ 1.79
SEC23IP-205ENST00000470478 DCAF1Q9Y4B6 1507 aa26.14■■□□□ 1.78
SEC23IP-205ENST00000470478 SCRIBQ14160 1630 aa25.93■■□□□ 1.74
SEC23IP-205ENST00000470478 SHROOM4Q9ULL8 1493 aa25.91■■□□□ 1.74
SEC23IP-205ENST00000470478 CC2D2AQ9P2K1 1620 aa25.74■■□□□ 1.71
SEC23IP-205ENST00000470478 EIF4G1Q04637 1599 aaKnown RBP25.67■■□□□ 1.7
SEC23IP-205ENST00000470478 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
SEC23IP-205ENST00000470478 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
SEC23IP-205ENST00000470478 ATAD2BQ9ULI0 1458 aa24.74■■□□□ 1.55
SEC23IP-205ENST00000470478 SMARCA4P51532 1647 aa24.73■■□□□ 1.55
SEC23IP-205ENST00000470478 SMARCA2P51531 1590 aa24.64■■□□□ 1.54
SEC23IP-205ENST00000470478 HMGXB3Q12766 1538 aa24.64■■□□□ 1.53
SEC23IP-205ENST00000470478 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
SEC23IP-205ENST00000470478 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
SEC23IP-205ENST00000470478 CUX2O14529 1486 aa24.51■■□□□ 1.51
SEC23IP-205ENST00000470478 DNAJC5Q9H3Z4 198 aa24.51■■□□□ 1.51
SEC23IP-205ENST00000470478 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
SEC23IP-205ENST00000470478 NESP48681 1621 aa24.47■■□□□ 1.51
SEC23IP-205ENST00000470478 BAZ1BQ9UIG0 1483 aaKnown RBP24.47■■□□□ 1.51
SEC23IP-205ENST00000470478 MROH2BQ7Z745 1585 aa24.42■■□□□ 1.5
SEC23IP-205ENST00000470478 THOC2Q8NI27 1593 aaKnown RBP24.27■■□□□ 1.48
SEC23IP-205ENST00000470478 LAMC3Q9Y6N6 1575 aa24.25■■□□□ 1.47
SEC23IP-205ENST00000470478 KIF21AQ7Z4S6 1674 aa24.19■■□□□ 1.46
SEC23IP-205ENST00000470478 WIZO95785 1651 aa24.15■■□□□ 1.46
SEC23IP-205ENST00000470478 PDS5BQ9NTI5 1447 aa24.05■■□□□ 1.44
SEC23IP-205ENST00000470478 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
SEC23IP-205ENST00000470478 MRC2Q9UBG0 1479 aa23.91■■□□□ 1.42
SEC23IP-205ENST00000470478 WDR62O43379 1518 aa23.89■■□□□ 1.41
SEC23IP-205ENST00000470478 RSF1Q96T23 1441 aaPredicted RBP23.87■■□□□ 1.41
SEC23IP-205ENST00000470478 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
SEC23IP-205ENST00000470478 CEP164Q9UPV0 1460 aa23.8■■□□□ 1.4
SEC23IP-205ENST00000470478 CFTRP13569 1480 aa23.77■■□□□ 1.4
SEC23IP-205ENST00000470478 FANCD2Q9BXW9 1451 aa23.77■■□□□ 1.4
SEC23IP-205ENST00000470478 URB2Q14146 1524 aaKnown RBP23.63■■□□□ 1.37
SEC23IP-205ENST00000470478 PRDM2Q13029 1718 aa23.61■■□□□ 1.37
SEC23IP-205ENST00000470478 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
SEC23IP-205ENST00000470478 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
SEC23IP-205ENST00000470478 TOPBP1Q92547 1522 aa23.34■■□□□ 1.33
SEC23IP-205ENST00000470478 ZNF608Q9ULD9 1512 aaPredicted RBP23.33■■□□□ 1.33
SEC23IP-205ENST00000470478 IFT140Q96RY7 1462 aa23.31■■□□□ 1.32
SEC23IP-205ENST00000470478 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
SEC23IP-205ENST00000470478 DNMBPQ6XZF7 1577 aa23.26■■□□□ 1.31
SEC23IP-205ENST00000470478 EIF4G3O43432 1585 aaKnown RBP23.22■■□□□ 1.31
SEC23IP-205ENST00000470478 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
SEC23IP-205ENST00000470478 TARBP1Q13395 1621 aaKnown RBP23.17■■□□□ 1.3
SEC23IP-205ENST00000470478 RIMBP3CA6NJZ7 1639 aa23.15■■□□□ 1.3
SEC23IP-205ENST00000470478 RIMBP3BA6NNM3 1639 aa23.15■■□□□ 1.3
SEC23IP-205ENST00000470478 RIMBP3Q9UFD9 1639 aa23.15■■□□□ 1.3
SEC23IP-205ENST00000470478 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
SEC23IP-205ENST00000470478 AQRO60306 1485 aaKnown RBP eCLIP23.08■■□□□ 1.29
SEC23IP-205ENST00000470478 CHD1O14646 1710 aa23.07■■□□□ 1.28
SEC23IP-205ENST00000470478 ARHGEF11O15085 1522 aa23.05■■□□□ 1.28
SEC23IP-205ENST00000470478 RAD54L2Q9Y4B4 1467 aa23.02■■□□□ 1.28
SEC23IP-205ENST00000470478 CUX1P39880 1505 aa22.95■■□□□ 1.26
SEC23IP-205ENST00000470478 FGD5Q6ZNL6 1462 aa22.95■■□□□ 1.26
SEC23IP-205ENST00000470478 SOGA1O94964 1423 aa22.93■■□□□ 1.26
SEC23IP-205ENST00000470478 TDRD9Q8NDG6 1382 aaKnown RBP22.91■■□□□ 1.26
SEC23IP-205ENST00000470478 WDR97A6NE52 1622 aa22.88■■□□□ 1.25
SEC23IP-205ENST00000470478 SNAPC4Q5SXM2 1469 aa22.86■■□□□ 1.25
SEC23IP-205ENST00000470478 ARAP1Q96P48 1450 aa22.85■■□□□ 1.25
SEC23IP-205ENST00000470478 FBLN2P98095 1184 aa22.84■■□□□ 1.25
SEC23IP-205ENST00000470478 CLASP1Q7Z460 1538 aa22.79■■□□□ 1.24
SEC23IP-205ENST00000470478 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
SEC23IP-205ENST00000470478 MAGI1Q96QZ7 1491 aaPredicted RBP22.77■■□□□ 1.24
SEC23IP-205ENST00000470478 GRIN2BQ13224 1484 aa22.76■■□□□ 1.23
SEC23IP-205ENST00000470478 PBRM1Q86U86 1689 aa22.75■■□□□ 1.23
SEC23IP-205ENST00000470478 SUPT5HO00267 1087 aaKnown RBP22.71■■□□□ 1.23
SEC23IP-205ENST00000470478 SYNJ1O43426 1573 aa22.71■■□□□ 1.23
SEC23IP-205ENST00000470478 SYNJ2O15056 1496 aa22.7■■□□□ 1.22
SEC23IP-205ENST00000470478 ABCA5Q8WWZ7 1642 aa22.7■■□□□ 1.22
SEC23IP-205ENST00000470478 ABCA10Q8WWZ4 1543 aa22.68■■□□□ 1.22
SEC23IP-205ENST00000470478 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
SEC23IP-205ENST00000470478 CHMP7Q8WUX9 453 aaPredicted RBP22.67■■□□□ 1.22
SEC23IP-205ENST00000470478 BIVM-ERCC5R4GMW8 1640 aa22.58■■□□□ 1.21
SEC23IP-205ENST00000470478 TOP2BQ02880 1626 aa22.56■■□□□ 1.2
SEC23IP-205ENST00000470478 ADAMTS12P58397 1594 aa22.53■■□□□ 1.2
SEC23IP-205ENST00000470478 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
SEC23IP-205ENST00000470478 TRHP20396 242 aaPredicted RBP22.51■■□□□ 1.19
SEC23IP-205ENST00000470478 GRIN2AQ12879 1464 aa22.49■■□□□ 1.19
SEC23IP-205ENST00000470478 CEP170Q5SW79 1584 aa22.46■■□□□ 1.19
SEC23IP-205ENST00000470478 ERCC6L2Q5T890 1561 aa22.46■■□□□ 1.19
SEC23IP-205ENST00000470478 NUP160Q12769 1436 aa22.43■■□□□ 1.18
SEC23IP-205ENST00000470478 ERICH3Q5RHP9 1530 aa22.38■■□□□ 1.17
SEC23IP-205ENST00000470478 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
SEC23IP-205ENST00000470478 SHROOM2Q13796 1616 aa22.37■■□□□ 1.17
SEC23IP-205ENST00000470478 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
SEC23IP-205ENST00000470478 PRG4Q92954 1404 aaPredicted RBP22.18■■□□□ 1.14
SEC23IP-205ENST00000470478 KIF13AQ9H1H9 1805 aa22.11■■□□□ 1.13
SEC23IP-205ENST00000470478 JPH4Q96JJ6 628 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms