Protein–RNA interactions for Protein: Q9BZQ2

SHCBP1L, Testicular spindle-associated protein SHCBP1L, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1LQ9BZQ2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
SHCBP1LQ9BZQ2 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 AC104564.3-201ENST00000582367 638 ntBASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 AC092667.1-201ENST00000434301 2586 ntBASIC20.88■□□□□ 0.93
SHCBP1LQ9BZQ2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.87■□□□□ 0.93
SHCBP1LQ9BZQ2 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 SRD5A1P1-201ENST00000442297 786 ntBASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SHCBP1LQ9BZQ2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 OR2I1P-207ENST00000453522 948 ntBASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SHCBP1LQ9BZQ2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 AC010141.3-201ENST00000456659 717 ntBASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SHCBP1LQ9BZQ2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHCBP1LQ9BZQ2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHCBP1LQ9BZQ2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHCBP1LQ9BZQ2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHCBP1LQ9BZQ2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SHCBP1LQ9BZQ2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SHCBP1LQ9BZQ2 AC087239.1-201ENST00000622671 572 ntBASIC20.83■□□□□ 0.93
SHCBP1LQ9BZQ2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.92
SHCBP1LQ9BZQ2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SHCBP1LQ9BZQ2 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SHCBP1LQ9BZQ2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 AL512631.2-201ENST00000604634 923 ntBASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 AC068587.7-201ENST00000641602 218 ntBASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SHCBP1LQ9BZQ2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms