Protein–RNA interactions for Protein: Q99470

SDF2, Stromal cell-derived factor 2, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2Q99470 AC005229.4-201ENST00000610085 2198 ntBASIC19.63■□□□□ 0.73
SDF2Q99470 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SDF2Q99470 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.63■□□□□ 0.73
SDF2Q99470 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.62■□□□□ 0.73
SDF2Q99470 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.62■□□□□ 0.73
SDF2Q99470 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SDF2Q99470 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.62■□□□□ 0.73
SDF2Q99470 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.62■□□□□ 0.73
SDF2Q99470 AL354811.1-201ENST00000610286 706 ntBASIC19.62■□□□□ 0.73
SDF2Q99470 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SDF2Q99470 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SDF2Q99470 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SDF2Q99470 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
SDF2Q99470 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
SDF2Q99470 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SDF2Q99470 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SDF2Q99470 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDF2Q99470 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDF2Q99470 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.61■□□□□ 0.73
SDF2Q99470 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SDF2Q99470 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.61■□□□□ 0.73
SDF2Q99470 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.6■□□□□ 0.73
SDF2Q99470 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.6■□□□□ 0.73
SDF2Q99470 AL358852.1-201ENST00000623174 1268 ntBASIC19.6■□□□□ 0.73
SDF2Q99470 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SDF2Q99470 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.6■□□□□ 0.73
SDF2Q99470 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SDF2Q99470 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SDF2Q99470 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDF2Q99470 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SDF2Q99470 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.59■□□□□ 0.73
SDF2Q99470 IRS3P-201ENST00000223076 1006 ntBASIC19.59■□□□□ 0.73
SDF2Q99470 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDF2Q99470 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.59■□□□□ 0.73
SDF2Q99470 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDF2Q99470 AC105265.2-201ENST00000467189 838 ntBASIC19.59■□□□□ 0.73
SDF2Q99470 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.59■□□□□ 0.73
SDF2Q99470 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.59■□□□□ 0.73
SDF2Q99470 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDF2Q99470 AF106564.1-201ENST00000607058 2553 ntBASIC19.59■□□□□ 0.73
SDF2Q99470 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.59■□□□□ 0.73
SDF2Q99470 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SDF2Q99470 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SDF2Q99470 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SDF2Q99470 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.58■□□□□ 0.73
SDF2Q99470 AL024507.2-201ENST00000606070 2574 ntBASIC19.58■□□□□ 0.73
SDF2Q99470 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
SDF2Q99470 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.58■□□□□ 0.72
SDF2Q99470 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.58■□□□□ 0.72
SDF2Q99470 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.58■□□□□ 0.72
SDF2Q99470 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SDF2Q99470 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SDF2Q99470 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.57■□□□□ 0.72
SDF2Q99470 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.57■□□□□ 0.72
SDF2Q99470 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SDF2Q99470 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.57■□□□□ 0.72
SDF2Q99470 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.57■□□□□ 0.72
SDF2Q99470 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SDF2Q99470 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.57■□□□□ 0.72
SDF2Q99470 TPRG1LP1-201ENST00000598702 760 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms