Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 AC103724.3-201ENST00000564481 992 ntBASIC18.24■□□□□ 0.51
BEST4Q8NFU0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BEST4Q8NFU0 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 YBX1P4-201ENST00000392794 808 ntBASIC18.23■□□□□ 0.51
BEST4Q8NFU0 AC103834.1-201ENST00000520383 144 ntBASIC18.23■□□□□ 0.51
BEST4Q8NFU0 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.23■□□□□ 0.51
BEST4Q8NFU0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.22■□□□□ 0.51
BEST4Q8NFU0 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 KRT8P33-201ENST00000508125 1423 ntBASIC18.21■□□□□ 0.51
BEST4Q8NFU0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BEST4Q8NFU0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BEST4Q8NFU0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BEST4Q8NFU0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms